Oncorhynchus nerka (sockeye salmon): 115109801
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Entry
115109801 CDS
T07952
Name
(RefSeq) phosphatidylinositol phosphatase PTPRQ-like
KO
K16910
receptor-type tyrosine-protein phosphatase Q [EC:
3.1.3.48
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115109801
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115109801
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115109801
Protein phosphatases and associated proteins [BR:
one01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115109801
Cilium and associated proteins [BR:
one03037
]
Other cilia and associated proteins
Stereociliary proteins
115109801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Tc-R-P
DSPc
Y_phosphatase3
Ig_J
PTPlike_phytase
PTP-SAK
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
115109801
NCBI-ProteinID:
XP_029490937
LinkDB
All DBs
Position
LG25:24539408..24585429
Genome browser
AA seq
2525 aa
AA seq
DB search
MGLTLLLLITYLGYTHSQADVSSMSSRTAFTVMVTAASSSNLSPPVSRIINTNETAPTSP
PTNLEGERVGSNGILLSWTMPSDSPIDGYVIRYKEMCPYPDITFKEVTKHLDVPETLLNL
FLPGSTYNIKVAAENSAGIGPYSKSMYIKTAEAPPGLVTNLTAFAQNHTFVVVTWFLPLR
INGLINKFAVKAKHARTGQTVRMLELDAEEIMTVALPHCNDAVEILSRGTASPSEVTASS
PPVTLSAVPPAATWAVPISVGVDQLRPYTAYVFEVSAFTSDGEGQVASTMVRMPESAPED
PPYNLSVWNVTSKSVSVSWDPPTIVTGRFSYVTHLYGPTGFIYENSTGDLKFAYSGLTPY
THYRVEVRAKSAGLLGPEAFSAVLTHAEAPSAVQALQAVALDSVSVGVSWRSPAQPNGLI
TQYRLLVLSDNTLLQDITLIGTQNLNDTDLHGDGTLVPGIPGDSLRRKRSADLSLTTSPL
AFTVTLSDHTVVTGMTTTSRTHSASTPPDLNPNLDHNNYTVPTVTESPSLTSMGPGTDQT
SDFPDSSPMTFDAVTSGTSVLSLTSSTPATPLPWLTANSHPGQLTSGQPRLSTRSAPAVT
GHLQTLPSTRAAASRTPGGLYVREEVIDMKSEELSYLVSGLSPFTEYTFTVTAATAIGEG
PASHVSEKTREQVPSAVVAVSYQNVSSTSILVSWTPPLYPNGRITHYTVYGLNLHSNQAL
QRVTNNTSILLTGLEKYTGYKLRVAASTAVGESSLSDRDDIFAVTPEDEPDSPPIGLTVV
DTSPSTTTLSWSPPERANGVIQQYEVLYKNQSFVAVLNSSVPRVTLTGLMPFSYYNVSVR
AYTRLGHGNHTSDTLTMLSGEDVPGSPPYGLSYESVSPNEVNVTWEPPLVPNGVITHYSL
ELRNSSHFLNLTTPISHVQITHLRKFAQYTLVVKGHTRMGPGNHSSDPLNITTLEDGESL
SNTQTHPRTTAVNHYTSPQWSEGSGVRGGSPFPLGTWLVLNNRKCVSDPDTPPQFLLARK
LSDYEVELSWEPPKEANSEILYYIVRVWNESSEVWQNVTGTAVVISVDSESRFNASVSSW
TRLGDGGVLIYISFSIIDAVPFDPPQNVSLVNLTFSSVTVLWQPPTQPNGILLHYTLYYS
DNTTVTEQHIPVSELDPVSLGEDLSYCLSGLRGGQNYSLWLTSSTMQGDGGVRTDPLDLL
TPDGVPSDPVHNLSAQIFSSTAIIVSWDPPMEPNGRPFYLLTLQEAGHPQPPKPMNPSYP
NTNPPGPPAVNNTITKTTNDNVFLFTKLRKYYPYVFTVTPATSAGPAHNHTSLLHVRTDD
DIPSSAPVLVSCRNLSSSSVSVVWQRPLEANGEITEYSLTMFGPGGSNTTHTPNTILTLT
QLLPYTAYNLSITAATRKGSGPPLLLMLHTDEAGPMSPPRNLSLYNHTAFSVWLTWEPSL
EPNGVVTNYGFRIWEINTNTIRYQNSTGPWTEGQLSGFRPHSSYEISVLSYTRVGHGDQY
STPVSFTTNESVSEVVGNLSCSGLGWDSVFLHWEPPANPNGLILYYQVQVDRHSDSQSYI
HQADTNQYTVSGLAPDAEFTLTVTAVNSAGPGDQVNCTAYTHPESVPGVPRFLSVSEATS
TSVTLQWAAPLSALGMLTEYRITVQLLSPDCLSNTPLSEATPLPEPSPSLAPGCVDQEVL
VSVNGSDGGEGNRSITLQSLVKYRHYRFRITALTNAGPGEHTPWRYTHTLAGNPDAPPSN
LSMTMSSNGLRIEWQLPDVITGPTSYLIDVISLDSEGLNQSVVRGPEELRTVVVSNLTAF
TRYSVTVTAFTGRLENARRDGQATEPTVIRTMEEEPRDPPKNVTLQVIPEEVTRVFVTFA
PPEEPNGNISSYTVLVYRQGQLEMTIDRLTVVQNENRTLTAVIDGLKGGYNYSIRIAAVN
GAGLSPPSSEVQITTGIKAPAKPTQRPQVMLDRGGVAMVTSRSIIVRMPACFYSNDNGPI
SSIQVIMSESGVMDSMNLTNWKTAFLSRPAPYLTDNGFPNPLCVRDRMSRDTQTSKLTFS
LIRHSIVRDRVLGHRDSGGERIDHQDDHYVIGEKDNCLTEEYSNTLCNGPLKPNTVYVFK
FRATNIRGQYTDSDYSEHIRTAVDGLLTRDEQIILGVLLSLFLALLLILVIYASVRIRQR
QKEGGTYSPREAEIIETKFKLDQLIAVADLELKEEKLHRLLSYRKSLKPVNKKSFLQHVE
DLCANENTKFQEEFAELPKLLQDLATSDADLPWNRSKNRFTNIKPYNNNRVKLLSEPGMP
GSDYINASFISGYLCPSEFIATQGPLPGTVADFWRMIWETRTRTIAMLTQCYEKGRIRCH
QYWPEDNKPVTVFGDIIITKLTEDVYPDWTVRALKVERHGDYMVVHHFNYTSWPEHGVPD
SSTTLIQFVRAIRANRHENTTIVVHCSAGVGRTGVFITLDHLIQHVSDHDFVDIYGLVAE
LRSERMCMVQNLAQYMFLHQSTLDLLNSKGNSQSIWFINYSALEKMDSLEAMEGDVELEW
EETTM
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcactctcctcctgctcatcacctacctgggatacacacactcacaggctgat
gtatccagtatgagttctcgaacagcgtttacagtcatggtgactgccgcgtcctcctcc
aacctcagccctccggtcagccgcattatcaacaccaacgaaaccgccccaacatcccca
cctaccaatctagagggagagagggtaggctccaatgggatccttctgtcttggaccatg
ccctctgactctcccatcgacggttatgtgatcaggtacaaggagatgtgtccatatcca
gatatcaccttcaaagaggtgaccaagcacctagatgtccctgagaccctcctcaacctc
tttttaccaggatctacctataacattaaggttgcagcagaaaactctgctggtattggt
ccctatagcaagtctatgtacatcaaaactgctgaggccccccccggcctggtgactaat
ctgacagcatttgctcagaaccacacgttcgtagtggtcacgtggttcctgccgctccgc
atcaacggtctgatcaacaagtttgcggtcaaagccaaacacgctcgtaccggtcagacc
gtccgcatgctggagctggatgctgaggaaatcatgaccgtagcgctaccacactgcaac
gatgcagtagaaatcctgtctcgtgggaccgcaagtccatcagaggtgacagcgtcctct
cctcctgtcaccctgtcagccgtcccacctgccgccacatgggctgtaccaatatccgta
ggggtggaccagctgcgtccctacacagcatacgtcttcgaagtgtctgctttcacctcc
gacggagagggacaggtagcctccaccatggtccgcatgcctgagtcagccccagaggac
cctccctacaacctgtcggtatggaatgtgacgtctaagtcagtctctgtctcctgggat
ccgccaaccattgttaccggacgcttcagctacgtcacccatctctacggccccacaggg
tttatctatgagaacagcacaggggacctgaagtttgcgtactctggtttgactccctac
acacactacagagtagaggtccgggccaagtctgctggcctgctggggcctgaggccttt
tctgcagtactgacacacgctgaggctcccagtgcggtgcaggctctgcaggcagtagca
ctagactctgtgtcggtgggtgtgagttggagaagccctgcccaacccaatggtctgatc
acacagtacagactcctggttctgtctgacaacacactgctgcaggacatcactctcatc
ggaacacagaacctaaatgacactgatctccatggtgatggaacgttagtgccaggtatc
cctggtgactctctgcggcgtaagagatcagctgacctcagcctgaccacctctccactt
gcattcacggtcaccctgtccgaccacacagtcgtcactggcatgaccacaaccagccgc
acacacagcgcttcaaccccccctgaccttaatcctaaccttgaccacaacaattacact
gtccccacagtcactgagagccccagtctgaccagtatgggccctgggactgaccagacc
tctgactttccagactcctcccctatgacctttgatgctgtaacttcagggacttctgtc
ctctccctgacctcttcaaccccggccacacccctcccctggctcactgccaactcacat
cccggccagctcacctctggccagccacgcctctccacccgttctgcacctgcagtcaca
ggacacctccagacactcccctccaccagggctgcagcctccagaaccccgggaggactg
tatgtgagagaggaggtgatagacatgaagtctgaggagctgtcttaccttgtctctggt
cttagtcccttcactgaatacaccttcaccgttaccgcggctaccgctattggagagggt
cctgcctcacacgtctctgagaagacccgcgagcaggttcctagcgcagtggtggctgtg
tcctatcagaacgttagctccacttccatcctggtcagctggactccgcccctctacccc
aacggacgaatcacacattacaccgtttacggactcaacctgcacagcaaccaggccctg
cagagagttacaaacaacaccagcatactgctcacagggctggagaagtatacaggttat
aaactgcgagtggctgcatctactgctgtaggagagagctctctgtctgaccgagacgat
atcttcgctgtcacacccgaagatgaacctgactccccacccataggattaacagtcgta
gacacctctccttccaccaccaccctctcttggtcgcccccggagagagccaatggagtg
atccaacagtatgaggtcctgtacaagaaccaatcatttgtggcagtgttgaacagctct
gtccccagagtgactctgacagggctgatgccgttctcctactataacgtgtctgtcaga
gcatacacacgcctcggacacgggaaccacacctcagacacactcactatgctgtctggg
gaggacgtaccgggaagtcctccctacggcctgtcctatgagtccgtcagtcccaatgag
gtgaatgtgacctgggaacccccactagtgcccaatggagttatcacgcactacagcctt
gagctgcgaaactcttcccacttcctcaacctgaccacacccattagccacgtccagatc
actcacctaaggaagtttgcgcaatacactctggtggtgaagggacacacacgaatgggc
cctggaaaccacagcagtgacccactcaacatcaccacactggaggatggtgagagcctc
tctaacacacaaacacaccccagaaccaccgcagtaaaccactatacatcaccccaatgg
agtgagggatctggggtaagaggggggagtccatttcccctagggacctggttggtctta
aataataggaagtgtgtttcagacccagacactccccctcagttcctgttagccaggaag
ttgtcagactacgaggtagaattgtcatgggaaccgccgaaagaggccaactctgagatc
ctctactacatagtcagagtctggaatgagtcatctgaggtgtggcagaatgtaacaggt
acagcggtggtgatcagcgttgactcagaaagtcgcttcaacgcctctgtctccagctgg
acgcgcctgggggacgggggagtcctcatatacatcagcttcagtattattgacgcagtg
ccatttgacccaccccagaatgtgtcgttggtgaacctgaccttttcttcagtgaccgtc
ctctggcaaccccccactcagccaaatggaatcctccttcactatactctgtactactca
gacaataccactgtcacagagcagcatatcccagtgtcagagctggaccctgtctctctg
ggggaggacctgtcctactgtctgtctggcctgagaggaggacagaactacagcctctgg
ctgacctccagcaccatgcaaggggacggaggggtccgtactgatcctttagacctactc
accccagatggcgtgcccagtgatccggtccacaatctcagtgctcagatcttcagttct
acagccatcatagtaagctgggacccccctatggaacccaatggacgccccttctacttg
ctcaccctgcaggaagcaggacacccccaacccccaaaacctatgaacccctcttaccct
aacaccaacccccccggaccccccgctgtcaacaataccatcaccaagacaaccaacgat
aacgtcttcctgtttaccaaactcaggaagtactatccctacgtcttcactgttactccg
gcaaccagcgccggcccggcccacaaccacaccagcctgctgcacgtgaggactgatgat
gatattcccagttcagctccagtgctggtgtcctgtaggaacctgtcgtcctcctctgtg
tctgtggtgtggcagcgccccctggaggccaatggagagataacagagtattccctcacc
atgttcggccctggcggctccaacaccacacacacccccaacaccatcctcacactcaca
cagctcctgccctacacagcctacaacctctccatcaccgcagccacccgcaagggctcc
ggacccccgctactactgatgctgcacacagatgaagcaggtccgatgtctcctcccagg
aatctgtctctgtataaccacacagccttttctgtgtggctgacctgggaaccctctctg
gaacccaatggtgtggtcacaaactacggcttcaggatctgggagattaacacaaacaca
atcagatatcagaactctacaggtccgtggacagaaggacagctgagtgggttcaggcct
cacagctcctatgagatcagtgtgcttagctacaccagagtgggtcatggagaccagtat
agcactcctgtgtccttcacaaccaatgagtccgtgtctgaagtggtgggtaacctgtcc
tgctctggtctgggctgggactctgtgtttctacactgggagcctccagccaaccccaat
ggactcatcctgtactaccaggtccaggtggacagacactcagactcacagtcatacata
caccaggctgacacaaaccagtatacggtcagcgggctggcgccggacgcagaattcaca
ctcaccgtaacagctgtcaactctgctggcccaggagaccaggtcaactgtactgcctac
acacaccccgagtcagttcctggtgtccctcgattcctgagtgtgtcagaggccacgtcc
accagcgtgacgctccaatgggctgctcccctctctgctctgggcatgctcactgagtac
cgcatcactgtgcagctgctgtcacctgactgcctgtccaacacacccctttctgaagcc
acacccctcccagagccgagcccttccctggctccaggctgcgtggatcaggaggtgttg
gtgtcagtgaatggttctgatggtggtgagggcaataggagcatcactctccagtctctg
gtcaagtaccgccactaccgcttcagaatcacagcccttactaatgctgggccaggagaa
cacacaccctggagatacacacacacattggctgggaaccctgatgcccctcccagcaac
ctctcaatgaccatgtcctccaatggcctccgtatcgaatggcaactcccagatgtgatt
accggccccacttcctacctcatagacgtaatctctctggatagcgaggggttaaaccag
tctgtagtacgcggcccagaggagctgaggaccgtagttgtgtcaaacctgactgcgttc
actcgctactctgtgaccgtgaccgccttcactggacgactggagaacgcacggcgggac
ggacaagccactgagcccactgtcatcagaacaatggaggaggagcccagggatcctcct
aagaatgtgaccctccaggtaattccagaggaagtgacccgtgtgtttgtgacctttgcc
cccccggaggagcctaatgggaacatcagttcctatacggtgctggtctaccgccagggc
cagctagagatgaccatcgaccgcctcaccgtggttcaaaacgagaaccgcaccctgacc
gcagtcatcgacgggctgaagggaggctacaactatagtatacggattgcagcggtaaac
ggagcaggtttaagcccccccagctcagaggttcagatcactacagggatcaaagctcct
gccaagcccacccagagaccccaggtgatgttggaccgaggaggagttgccatggtaacc
tccagaagcatcattgttcgcatgccagcttgtttctacagcaatgacaacggaccaatc
agcagcatccaggtcatcatgtccgaatctggggtgatggacagcatgaacctgaccaac
tggaagacagcatttctctctcgtcccgccccctacctaacagacaatggcttccccaac
ccactctgtgtgagggaccgtatgagcagggacacacaaaccagcaaactcactttctca
ctcattagacacagtattgtgagggacagggttctgggacatagagactcagggggggag
cgcatagaccaccaggatgatcactatgtcatcggagagaaggacaactgtctgactgaa
gagtacagtaacacactctgtaacggacccctcaaaccaaacactgtctacgtgtttaag
ttccgagccaccaacatccggggccagtatacagactccgactactctgagcatatcaga
acagcagtggatgggttgttgaccagagatgaacagatcattctgggagttctcctctcc
ttgttcctggccctgctgctcatcctcgtcatctacgcctctgtcaggatccgtcagcgg
cagaaggagggcgggacctactctccccgggaggcggagattatagagaccaagtttaaa
ctggatcaactgattgctgtggctgacctggagctgaaggaagagaaactacaccgactt
ctcagctacagaaagtctctcaagcccgtcaataagaagtctttcctgcagcatgtagag
gatctgtgtgccaacgagaacaccaagttccaggaagagtttgccgagttgcccaaactg
ctgcaggatctggctacttcagacgctgaccttccctggaacagatccaagaaccgcttc
actaacatcaaaccctacaacaacaaccgtgtgaagctcttgtctgagcctggcatgcct
ggatctgactacattaacgctagcttcatctcaggttacttgtgtcctagtgagttcata
gcgacccagggtcctctccccggcactgtggctgacttttggaggatgatctgggagact
cgcacacgaaccatcgctatgctcacacagtgctatgagaaaggaaggatccggtgtcac
cagtactggccagaggacaataagccggtgacagtgtttggggacatcatcatcaccaag
ctgacagaggacgtttatcctgactggaccgtcagagctctcaaagtggagcggcatggg
gactacatggtggttcaccacttcaactacacctcctggccagagcatggtgtaccagat
tccagcaccacactcatacagtttgttcgagccatcagagccaacaggcatgagaacact
actatagtggtgcactgcagtgctggcgtgggcaggacaggagtgtttataacgctggat
cacctgatccaacacgttagtgatcacgactttgtggacatctacggtctggtggctgaa
ctacgcagtgagaggatgtgtatggtgcagaacctggcccagtatatgttcctacaccag
agtactctggatctgctgaacagtaaaggaaacagccagtccatctggttcatcaactac
tctgctctggagaagatggactcactggaagctatggagggtgatgtcgagctggaatgg
gaggagactacgatgtaa
DBGET
integrated database retrieval system
