Oncorhynchus nerka (sockeye salmon): 115109917
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Entry
115109917 CDS
T07952
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D-like
KO
K22038
volume-regulated anion channel
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115109917
Ion channels [BR:
one04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
115109917
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
115109917
NCBI-ProteinID:
XP_029491026
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Position
LG26:19874056..19879687
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AA seq
892 aa
AA seq
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MFSLSELASLSERQGSSKLLKPWWEVFMEYLVVLMLIVSVLSGTLLLSRDRVVCLPLDLT
TTPTNQNTSSSSGAVPQPHPPNRPPTKPSPLPASHWTPARGRRTHLDYQQYVYISQVCYH
EALPWYSRFFPYVALLQSLVLLASGCFWFHFPLTSARIEHFLTILAKCCESPWTSRALSH
AARQEEGGEETGPQDLQMPPPTLLSSLSVSRNRQSSLDSGTDSPLLVRSDSASTAAPPSP
CPSTLSRTSSLSTMSLSRAHVPASKSPVVLDGSRQVASLDRSDGEQARALFERVRRFRSH
CENSEVIYKVYLAQTVFKLLLVVLIVGYTTPLMSSISFTHTCLPQAHALTGYSAFECTHA
LASVLHKLLLAYISLVGLFGLLSIYTLSWILHSSLRQYSFNKLRELGSMRDVPDLCNDLA
FLLHMADQYDPLLAQRLSVFLSPVSETRLLEESLERRWGAERLRSMTTVDPEGRPLLQLV
ALPRLPPALFTLSQLVVLKLELITDAKLPAQVANMTSLRELHLYHCTAAMQPGSLVVLQE
RLEALHLTFTQAAEIPGWVYSLRGLQELHLSGRLGCEGGVGRGWALGSLRQLRHLRVLVL
RGMLQRVPGELGEVAGSLVRLEIHNEGSRLLVLTGLRRVAGLTELQLQDCHLERLPSALL
ALTSLRTLDLQHNSLRTLEELLGLAHLRRLSCLRLAHNRILALPASVGVLRALELLDLGY
NQLQSLPPALFNLHHLRRLLLAGNLLDELPAEVGALTFLTELDLSGNRLESLPPELFSRC
LELRSLNVSHNSLGSLPPGLSNLSHLSRLDLRSNSLEELPMELGCCSGLHGEGLLVEDWL
LHALPRHVKEFLTQSGSHTGKSLESHSRPDSDSFPYFSATQWSFSSALESRI
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcctgtcagagctggcctctctgagtgagcgtcagggcagctccaagctgctg
aagccctggtgggaggtcttcatggagtacctagtggtgctgatgctcatagtatctgtg
ttgtcaggcaccctgttgctatctcgagacagggtggtgtgtctccccctggacctcact
accacccctactaaccagaacacctcctccagcagtggtgccgtacctcaaccccacccc
cctaacaggccccccaccaaaccatcccccctaccagccagccattggacccctgctagg
ggcagacgcacccacctggactaccagcagtatgtctacattagccaggtgtgctaccac
gaggccctgccctggtactcccgcttcttcccctatgtggctctactccagtccctggtg
ctattggccagcggttgcttctggttccacttccccctcacctccgcccgcatagagcac
ttcctgaccatcctggccaagtgttgtgagtctccctggacctcccgcgccctgtcccat
gccgcccgccaggaggagggaggggaggagacaggcccccaggatctccaaatgcctcct
cctactctcctgtcttcactctccgtatcccgcaaccgccagtccagcctggactcgggc
acagacagccccctgctggtgagatcggatagcgcgtccactgccgcccctccctcgccc
tgcccctccactctctcccggacctcctccctgtccaccatgtctctgtcccgggcccat
gtcccggcttccaaatcacctgtggtgctggatggttcacggcaggttgccagtttggac
cggagtgacggggagcaggccagggcactgttcgagagggtgcgccgcttccgctcccac
tgtgagaactctgaagtcatctacaaggtgtacttggcccagacagtgttcaagctactg
ctggtggtgctgatagtgggctacaccactcctctgatgagctccatctcgttcacccac
acctgcctgccccaggcccatgccctgactggctacagtgcctttgagtgtacccatgcc
ctggcctctgtcctccacaagttgctgctggcctacatcagcctggtggggctctttggc
ctgctgagcatctacaccctcagctggatcctccacagctccctgcgtcaatactccttt
aacaaactgagggagctgggctccatgagggatgtccctgatttatgtaatgacctggcc
ttcctgttacacatggctgaccagtacgaccccctactggcccagcgcctttccgtcttc
ctgtcacctgtcagcgagacacgcctgctggaggagagcctggagaggcgctggggtgcc
gagaggctgcgctccatgaccacggtcgacccagagggacggcccctgctgcagctggtg
gccctgccgcgcctgccccctgccctcttcaccctcagccagctggtagtgctcaagctg
gagctcatcacggacgccaagctccccgcacaggtggccaacatgacctcactcagggag
cttcatttgtaccactgtactgcagccatgcagcctggttccctggtggttctgcaggag
cgtctggaggccctgcacctcaccttcacccaggctgcagagatccctggctgggtctac
tctctccgcggcctgcaggagctgcacctttctggccgactgggctgcgagggcggggtg
ggtcgtggctgggccctgggaagcctccggcagctccgtcacctccgggtgctggtcctg
aggggcatgctgcagcgtgtgcccggggagctgggggaggtggcagggagcctggtgagg
ctggagatccacaacgagggctccaggctgctggtgctgacgggcctgcggcgtgtggcc
ggcctgaccgagctgcagctgcaggactgccacttggagcgcctgccctctgccctgctg
gccctcaccagcctgcgcaccctggacctgcagcacaacagcctgcgcaccctggaggag
ctcctagggctggcacacctccgccgcctctcctgcctcaggctggcccataaccgtatt
ctggccctaccggctagtgttggtgtactgcgtgctctggagctcctggacctggggtac
aaccagctccagagccttcccccggccctcttcaacctccaccacctacgtcgcctccta
ctggctggaaacctgctggacgagctgccagcagaggtaggggcgctgacatttctcaca
gagttggacctgagtgggaacaggctggagagcctgcccccagagctcttcagtcgctgt
ttggagctgcggagcctgaatgtatcccacaactccctgggttccctgcctccagggctg
agcaacctgagtcacctgtcccgcctggacctgcgcagcaacagtctagaagagctgccc
atggagctgggctgctgttcaggactgcatggagaaggtctgctggtggaggactggctg
ctccatgcactgccacgacatgtgaaggagttcctaacccagtctggctctcataccggc
aaatccttagaatcacactcccgtccagactcagatagcttcccctacttctcggctacc
cagtggagtttctcctctgctctggaatcacggatatag
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