KEGG   Oncorhynchus nerka (sockeye salmon): 115110066
Entry
115110066         CDS       T07952                                 
Name
(RefSeq) thyroid hormone receptor alpha
  KO
K05547  thyroid hormone receptor alpha
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04080  Neuroactive ligand-receptor interaction
one04081  Hormone signaling
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    115110066
   04081 Hormone signaling
    115110066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:one03000]
    115110066
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:one03310]
    115110066
Transcription factors [BR:one03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    115110066
Nuclear receptors [BR:one03310]
 1. Thyroid hormone like
  1A. Thyroid hormone receptor (THR)
   115110066
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 115110066
NCBI-ProteinID: XP_029491266
LinkDB
Position
LG26:complement(3747719..3851663)
AA seq 416 aa
MEPISNVEDPNSSEGDEKRWPDGPKRKRKNSTCSVKSMSALSLSVPGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYDGCCIIDKITRNQCQLCRFRK
CIAVGMAMDLVLDDSKRVAKRRLIEENREKRKKDEIVKTLQTRPEPDSSEWELIRHVTEA
HRHTNAQGSHWKQKRKFLPEDIGQSPGVPTPDGDKVDLEAFSEFTKIITPAITRVVDFAK
KLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDSEVALLQAVLLMSSDRSGLTSVDKIEKCQETYLLAFEHYIN
HRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggagcccatttccaacgtcgaggaccccaactcatcagagggagatgagaaacggtgg
cctgatggcccaaaaaggaagagaaagaacagcacatgttcggtgaagagcatgtctgca
ctgagcctctctgtcccaggatacatccccagctacttggagaaggatgagccgtgtgtg
gtatgtggagacaaggccaccggctaccattaccgctgcatcacctgcgagggctgcaag
ggtttcttcaggcgcaccatccagaagaaccttcacccggcttactcctgtaagtacgat
ggctgctgcatcatcgacaagatcacaaggaaccagtgccaactgtgtcgcttcaggaag
tgcatcgcagttggcatggccatggacttggtgctggacgactctaagcgggttgccaag
cggcgtctgattgaggagaaccgggagaagaggaagaaagacgagattgtgaagacattg
cagacccgtccggagcccgacagctcggagtgggagctgattcgccatgtgacagaggcc
caccgccacaccaacgcgcagggctcccactggaaacagaaacgcaagttcctgcctgag
gatataggtcagtcccccggggttcccaccccagacggagacaaggtagacctggaggcc
ttcagcgagttcaccaagatcatcacccctgccatcacacgcgtcgtcgactttgccaaa
aaactgcccatgttctcagagctgccttgtgaggaccagatcatcctattgaaaggctgc
tgtatggagatcatgtcgctgcgtgccgccgtgcgctatgacccagagagcgagacgctt
accctgagcggcgagatggcggtgaagagggagcagctgaagaatggcgggctgggcgtg
gtgtcggacgccatctttgatttgggcaagagtctggcacagtttaacctggacgactct
gaggtggccctgctgcaggctgtgctcctcatgagctcagatcgctcgggcctgacgtcg
gtagataagatcgagaagtgccaggaaacgtacctgcttgccttcgagcactacatcaac
caccgcaagcacaacattccccacttctggcccaagttgctgatgaaggtgacggacctg
aggatgatcggggcgtgccacgccagccgcttcctccacatgaaggtggagtgtcccaac
gagctcttccctccgctcttcctggaggtcttcgaggaccaggaagtatga

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