Oncorhynchus nerka (sockeye salmon): 115110066
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Entry
115110066 CDS
T07952
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115110066
04081 Hormone signaling
115110066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115110066
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115110066
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115110066
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
115110066
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115110066
NCBI-ProteinID:
XP_029491266
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Position
LG26:complement(3747719..3851663)
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AA seq
416 aa
AA seq
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MEPISNVEDPNSSEGDEKRWPDGPKRKRKNSTCSVKSMSALSLSVPGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYDGCCIIDKITRNQCQLCRFRK
CIAVGMAMDLVLDDSKRVAKRRLIEENREKRKKDEIVKTLQTRPEPDSSEWELIRHVTEA
HRHTNAQGSHWKQKRKFLPEDIGQSPGVPTPDGDKVDLEAFSEFTKIITPAITRVVDFAK
KLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDSEVALLQAVLLMSSDRSGLTSVDKIEKCQETYLLAFEHYIN
HRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatttccaacgtcgaggaccccaactcatcagagggagatgagaaacggtgg
cctgatggcccaaaaaggaagagaaagaacagcacatgttcggtgaagagcatgtctgca
ctgagcctctctgtcccaggatacatccccagctacttggagaaggatgagccgtgtgtg
gtatgtggagacaaggccaccggctaccattaccgctgcatcacctgcgagggctgcaag
ggtttcttcaggcgcaccatccagaagaaccttcacccggcttactcctgtaagtacgat
ggctgctgcatcatcgacaagatcacaaggaaccagtgccaactgtgtcgcttcaggaag
tgcatcgcagttggcatggccatggacttggtgctggacgactctaagcgggttgccaag
cggcgtctgattgaggagaaccgggagaagaggaagaaagacgagattgtgaagacattg
cagacccgtccggagcccgacagctcggagtgggagctgattcgccatgtgacagaggcc
caccgccacaccaacgcgcagggctcccactggaaacagaaacgcaagttcctgcctgag
gatataggtcagtcccccggggttcccaccccagacggagacaaggtagacctggaggcc
ttcagcgagttcaccaagatcatcacccctgccatcacacgcgtcgtcgactttgccaaa
aaactgcccatgttctcagagctgccttgtgaggaccagatcatcctattgaaaggctgc
tgtatggagatcatgtcgctgcgtgccgccgtgcgctatgacccagagagcgagacgctt
accctgagcggcgagatggcggtgaagagggagcagctgaagaatggcgggctgggcgtg
gtgtcggacgccatctttgatttgggcaagagtctggcacagtttaacctggacgactct
gaggtggccctgctgcaggctgtgctcctcatgagctcagatcgctcgggcctgacgtcg
gtagataagatcgagaagtgccaggaaacgtacctgcttgccttcgagcactacatcaac
caccgcaagcacaacattccccacttctggcccaagttgctgatgaaggtgacggacctg
aggatgatcggggcgtgccacgccagccgcttcctccacatgaaggtggagtgtcccaac
gagctcttccctccgctcttcctggaggtcttcgaggaccaggaagtatga
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