Oncorhynchus nerka (sockeye salmon): 115110126
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Entry
115110126 CDS
T07952
Name
(RefSeq) integrin alpha-IIb-like
KO
K06476
integrin alpha 2B
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
one04810
Regulation of actin cytoskeleton
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115110126
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115110126
09142 Cell motility
04820 Cytoskeleton in muscle cells
115110126
04810 Regulation of actin cytoskeleton
115110126
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115110126
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115110126
04515 Cell adhesion molecules [BR:
one04515
]
115110126
04090 CD molecules [BR:
one04090
]
115110126
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115110126
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115110126
Cell adhesion molecules [BR:
one04515
]
Integrins
Integrin alpha subunits
115110126
CD molecules [BR:
one04090
]
Proteins
115110126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
PH1_SSRP1-like
Motif
Other DBs
NCBI-GeneID:
115110126
NCBI-ProteinID:
XP_029491374
LinkDB
All DBs
Position
LG26:complement(5313892..5329635)
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AA seq
1056 aa
AA seq
DB search
MKKMEEHRIHRSIQMMGLLLFALPHYSDTLNLNLVNFTEFSGPEGSFFGFSADFYQFSNK
TISVVVGAPRANTSQPRVTEAGAVYLCPWAQTGGACTTMTFDTKGDEVYPHQNLVISSSK
SHQWFGATVRSSGNYIVACAPLFHWNVIDVGEREEAQNTPVGTCLVLNTLTGETVNFSPC
RDVMTEKNYKALKYTTDRRYCEVGFSSDITKEGRLLIGAPGGYYFQGQIISAGLPDIVDS
AKSQNAKPYVAGQTHSPETGGYDHYHGYSVATGEFTGDSIPDYVVGVPNDRNTAGSVKIY
NGHTPGFLGVKRTFLGSQVASYFGHSVAVTDINNDGIDDILIGAPLFMERVSGQQLQEVG
QVSVYLQRERSTFHSKPDQKLTGSQLYGRFGSTIAPLGDLDKDGFNDVAVGAPSSGVEGR
VFVYMGTSDGLSPQYTQVIESPFRSLGSPAHFGFTLRGATDIDSNGYPDLIVGAWGVNKI
AVYRAQAVVMAKTQLSLYPDFLNPDVKECQRPTTNEPVACFTVMMCISVSGHSIPEEIVL
DAELQLDKMKQTMARRTLLLQTNLPQEYFQLTIQRDVGVVCRNQTAYLRHESEFKDKLSP
IFISLNYSLSNSQEAMLHGQRAVVAQTRIILDCGEDNVCVPDLRLTAEAGTDRLLIGDDH
PALLVITAENRGEGAYETELEIRPPANTHYQSMVTDRKGFSKLICAQKKENQTVVMVCEL
GNPMKQGQKLLAGLFFSVGNLEEVESHVSFTLQIKSKNSQNPESNVTHLRIDVSAEAALE
MRGGSSPPECVLPIAKWEQKEHPADLEEVGPLVEHVYELRNLGPSTVNARVQVEFPTHHH
GDVLLYVFANASEDFLTCHTDSPDIDPYQLVKTGNATVGKVYKVKQNEVAQQEPQRKETV
HVNCTSGDTCLRFVCEATGLERGWSAVVKVMSRLWVQTFLERPYENYVLHSTARFDVIDM
PSKIQPEELPSGQAETQTSVVWRAPDGEKEVPVWWIVVAVVSGLFLLALLALIFWKVGFF
NRNRPPCDDDDDAEHLAGAGQSEYAEMPTNTEDKQA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatggaggaacaccggattcatagatcaatacaaatgatgggtctcctgcta
tttgctctcccacattactctgacaccttaaatctaaacctggttaacttcactgagttc
tctggccccgagggaagcttctttggcttctctgcagatttctatcagtttagcaacaaa
accatcagtgttgtggttggggcccctagagccaacaccagtcagccaagagtcactgag
gccggggctgtgtatctctgtccctgggcacagacaggaggggcctgtactaccatgacc
tttgacacaaaaggtgatgaggtttatcctcaccagaacttagtgataagctcttcaaag
tcccaccagtggtttggtgctactgtgcgatcctccggaaactacattgtggcctgtgcc
cccctgttccactggaacgtaatagacgtgggggaacgtgaggaggcccagaacactcca
gtggggacctgcctagtgttgaatacactgacgggggaaacagtcaacttctccccctgc
agagacgtcatgactgagaaaaattacaaagccctgaagtacactaccgacagacgatac
tgtgaagtgggatttagctctgacataacaaaggagggaaggctccttatcggtgctcct
ggaggctactattttcaaggtcagatcatcagtgcaggactgcctgacatcgtcgacagt
gccaagagccagaatgccaaaccttatgtggcaggacaaacccattcccctgagactggt
ggatacgatcattaccatgggtattctgtggccactggcgagttcactggagactcaata
ccagattatgtggttggagtgcctaatgatcgcaacacagcaggctcagtcaaaatctat
aatggacacacacctggctttttgggagttaaacgcacattcttaggctctcaggtggcc
tcttacttcggccacagtgttgcagtgactgatattaacaatgatggaatagacgacatc
ctaatcggggcgcccctcttcatggagcgtgtgtcgggccagcagttgcaggaggtggga
caggtgagtgtgtacctgcagagagagcgctccaccttccactccaagccagaccagaag
ctgacaggttcccagttgtacggacgctttggcagcaccatcgcccccctcggtgaccta
gacaaggacggttttaacgatgttgccgtgggagccccatcctcgggcgttgaagggagg
gttttcgtctacatggggactagtgatggactgtctccccagtatacccaggtcatcgag
agtcccttccggtccctaggctctccagcacattttggcttcaccctgagaggggccact
gacattgattcaaatggctacccagatctaattgttggtgcatggggagtcaataagatt
gctgtgtacagggctcaagccgtggtgatggcaaagacccaactttccctctaccctgac
ttcctgaacccagatgtgaaggagtgtcagcgccccaccaccaacgagcctgtggcctgc
ttcacagtcatgatgtgcattagtgtgtctggccacagcattccagaggagatagttcta
gatgcagagcttcagctggacaagatgaaacagacaatggccaggaggaccctattgctg
cagaccaatctgccccaagagtattttcagctaaccattcagagagatgtgggagtggtc
tgcaggaaccaaaccgcttacctacggcatgagtccgagttcaaggacaagctcagcccc
atcttcatatccttgaactacagcctgtccaactcccaggaggccatgctgcatggccag
agagctgtggtcgcacagaccaggatcattctggactgcggagaggacaacgtctgtgtc
cctgacctgaggctgactgctgaagcaggtactgaccgtcttctgataggggatgaccac
cctgccctgctggtcatcacagcagagaacagaggagagggggcctacgagaccgagctg
gagatacgcccaccagccaacacacactaccagagtatggtgactgacagaaagggcttc
agcaagttgatttgtgctcagaagaaggagaaccagacggtggtgatggtctgtgagctg
gggaaccctatgaagcagggccagaagctcctggccggtctgttcttcagcgtggggaac
ctggaggaggtggagagtcacgtgtcattcacattacagatcaaaagcaagaacagccag
aaccctgaaagtaacgtgacccatctgaggattgatgtcagcgctgaggcagctctggag
atgcgggggggctcctctccacctgagtgtgtcctgcccattgccaagtgggaacagaag
gagcatcctgctgacctagaggaggttggcccgctagtggaacacgtctatgagttgaga
aacctgggtccgagcacggtcaacgccagggtgcaggtagagttccctacccatcaccat
ggagacgtcctgctctatgtgttcgccaatgcttctgaggatttcctcacctgccacact
gactcccctgacatcgacccatatcagttggtgaagaccgggaatgctactgttggtaaa
gtgtataaggtcaaacagaatgaggtggcacagcaggagcctcagcgcaaagagaccgtt
cacgtgaactgcaccagtggagatacctgtctgaggtttgtgtgtgaggccacaggtctg
gagagaggctggagcgctgtggtgaaggtgatgtctcgactctgggtacagaccttcctg
gagaggccctatgagaattatgttctccactctacagcacgctttgatgttatagatatg
ccctccaagatccagcctgaagagctgccaagtggacaggctgagacccagaccagtgtg
gtgtggagggctcctgatggagagaaggaagtgccggtgtggtggattgttgtggctgtg
gtctctggcctcttcctccttgctctgctagctctgatcttctggaaggtggggttcttt
aatcgtaaccgtcccccgtgtgatgatgacgacgatgcagaacacctagctggggctgga
cagtcagaatacgctgagatgcccacaaacacagaggacaagcaagcataa
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