Oncorhynchus nerka (sockeye salmon): 115110144
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Entry
115110144 CDS
T07952
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00603
Glycosphingolipid biosynthesis - globo and isoglobo series
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
115110144
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115110144
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
115110144
Glycosyltransferases [BR:
one01003
]
Glycan extension
FORS blood group (Forssman antigen)
115110144
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
115110144
NCBI-ProteinID:
XP_029491406
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All DBs
Position
LG26:complement(6306693..6320602)
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AA seq
351 aa
AA seq
DB search
MRFSSNVKPYVLLLIVGTFLLLGYVYFNFFPERLNRDIPIDEDQKSTSLSRLVFRSRVRS
MVSPEKLLYKQPSVLVGRTDVVSVTPWLAPIVWEGTFDPVLVDNIYKPMNLTVATTVFAI
GKYVRFLQDFLETAEKHFMVGFNMRYYVFTDRPHDVPSVNLTQGRHLSVIQVPGSNRWQE
ISARRMEIIQTAIERQISREADYIFCLDVDSKFYARWGAESLGRLVAVIHPWFYQATRDH
FTYERRPASTAYIPMDEGDYYYAGALFGGFVEDVYTLTKVCRNQLEEDARNSIEAAWQEE
SHLNRYLLYNKPSKLLSPEYQWDDKKTNTKEVKVIRFSGVIKNYADVRPNV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttagttcaaatgtcaagccatatgttctgcttctcattgttggaacgttcttg
cttctggggtatgtctacttcaacttcttccctgaaagactcaacagagatatcccaatt
gatgaggaccagaagagcaccagcctgagtcgactcgtgttcaggagcagagtacggagc
atggtctctcctgaaaagctattgtacaagcagcccagtgtcttggtgggacgtactgat
gtggtgtcagtgaccccatggttggcacccatcgtctgggaaggcacctttgaccctgtg
cttgtcgacaatatctacaagcccatgaacctcaccgtagcaaccacagtgtttgccatt
ggaaaatacgtcagatttctccaagattttctggagacagcagagaagcactttatggtc
ggcttcaacatgcgttactatgttttcactgatcgtccccacgatgttccttcagtgaac
ctgactcaggggagacatttgagtgtgatccaggtcccgggttcaaaccgctggcaggag
atatcagcccggaggatggagatcatccagacagccatcgaacgtcagatcagcagggag
gccgactacatcttctgtctggacgtggacagcaagttctacgctcgctggggagccgag
tctctgggcaggctggttgctgtgattcacccatggttctaccaggcgacccgtgaccac
ttcacatacgaacggcgtccagcctcgacagcctacatccccatggatgagggagattac
tactatgccggggccctgttcggaggattcgtggaggatgtgtacacactaacaaaggta
tgccggaaccagcttgaagaggacgcgaggaattccattgaggctgcctggcaggaggag
agtcacctcaacaggtacctgctttacaacaagcccagcaagctgttgtctccagagtac
cagtgggatgacaagaagaccaataccaaagaggtcaaagtcattcgcttctcaggggtc
attaaaaactatgctgatgttcgtcccaatgtataa
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integrated database retrieval system
