KEGG   Oncorhynchus nerka (sockeye salmon): 115110168
Entry
115110168         CDS       T07952                                 
Name
(RefSeq) cyclin-T2-like
  KO
K15188  cyclin T
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115110168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:one03021]
    115110168
Transcription machinery [BR:one03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     115110168
    Brd4/P-TEFb complex
     115110168
    7SK RNP complex
     115110168
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 115110168
NCBI-ProteinID: XP_029491453
LinkDB
Position
LG3:complement(40392275..40402352)
AA seq 662 aa
MAACRGSSSKWFFTREQIEATPSRRSGVDPDKELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMFHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQETPLDT
KSNAYLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQHKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEF
LQILEKTPSRLKRIRNWRTTQAAKKTKGDGSQANDPYPGPSLIHEHSLGDAIPGVSNSAF
SKAASSFPVPLPGHASGPLSLDSIASMQGTSYTFTAPSDWPQDTGGRLEGGSYSLKTDAL
GLQQGPPMNPNRPDKSGEFNPTKHEHKVGSGGGVGKQQQPIFPPPPPPAQKMSLDKYREK
HAAELAVQHKRRAEQQSFEPEGRDSYIPSVQSDHRKHMQLHPNPGSSSTTASPLKMKLAT
PGQDKVPSDKRDKGGSLKLRLPIPSQGGVASKEELKMKIKVSSERHSSSDEGGAKSKHSS
PLVSKEKHREHSTHRHHHKQHGHSHLHAAQHSGNGRGVPEGPAGAGPAVLRRPLGLGGVE
GVAGMAPSSGSSSSRKRGHPHVASHNHHSSKTSKSSKGGAGGLRTSQRPSETGQEASGEP
QS
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcggcgtgccggggatcctcttcaaaatggtttttcacccgggagcaaatcgaagcc
acgccgtcccgccgttcgggagtggatccggacaaggagctatcttaccgacagcaggcg
gctaacctcattcaagatatgggccagagactcaacgtctcacaacttacaataaataca
gcaattgtttacatgcatagattttatatgttccactctttcaccaaattccacagaaat
atcatttctccaaccaccttattcctagctgcgaaagttgaagagcaacctcggaaactt
gagcatgttattaaagttgcccatgcttgtctaaaccctcaagagaccccgcttgataca
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaaaccatagtgctg
cagactttaggatttgaaataactattgaacatccacacactgatgtggtgaaatgttcc
cagctagtgagagcaagcaaggatctggcacagacttcctatttcatggctaccaacagc
ctccacctcaccaccttctgcctgcaacacaagcccacagtaatcgcctgcgtctgcatc
cacctggcctgtaaatggtccaactgggagatcccggtctccactgacgggaaacactgg
tgggagtacgtggacaactctgtcacactggagcttctcgatgaactgacgcatgagttc
cttcagattctggagaagacaccgagcaggttgaagaggatacgaaattggaggaccacg
caagctgccaagaagaccaagggggatggctctcaggcaaacgacccctacccaggaccc
tccctgatccacgaacattccctgggagatgccatccctggggtctccaactcagccttc
tccaaagccgcttcatcgttccctgtccctctgccagggcacgccagtgggcccctctcc
ctggactctatcgcgtccatgcagggcacctcctacaccttcacagcccccagcgactgg
ccccaggatacggggggtcgcttggagggaggaagctattccctcaaaacggatgcactt
ggcctccagcagggtcctccaatgaacccgaacagacccgataagtcaggagagttcaac
cctactaaacatgaacacaaggtcgggtcaggggggggtgtggggaagcaacaacagcca
attttccctccaccgcccccaccggctcagaaaatgtccctggacaagtatagagagaag
cacgctgctgagctggcggtgcagcataaacgcagggcagagcagcagagtttcgagcct
gagggcagggactcatatataccctctgtccaatcagaccacaggaaacacatgcagctc
caccctaaccctgggagcagcagcaccactgcctcccctcttaaaatgaagctcgccacg
ccaggccaggacaaggtcccctctgacaaacgggacaaggggggctcactcaaactccgc
cttccaattccttctcaggggggcgtggccagcaaagaggagctgaagatgaaaatcaag
gtgtcctcggagcgccacagctcttctgatgagggcggggccaagagcaaacattccagc
ccgctagtgagcaaggagaagcaccgagaacactcaacccaccgccaccaccacaagcag
cacggccactctcaccttcatgcagcacagcacagtggcaacggccgaggggtccccgag
gggccagcgggggccgggccagccgtcctccggagacccctagggctggggggtgttgag
ggggtggcgggcatggcccctagctctggttccagctcctcccgcaagagggggcaccca
cacgtcgcaagccacaaccaccactcctccaaaacgagcaaaagctccaagggcggcgca
ggtgggctacgaacatctcaacgccctagtgaaactggacaagaagccagtggagagccg
cagtcttga

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