Oncorhynchus nerka (sockeye salmon): 115110168
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Entry
115110168 CDS
T07952
Name
(RefSeq) cyclin-T2-like
KO
K15188
cyclin T
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115110168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115110168
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
115110168
Brd4/P-TEFb complex
115110168
7SK RNP complex
115110168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
115110168
NCBI-ProteinID:
XP_029491453
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All DBs
Position
LG3:complement(40392275..40402352)
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AA seq
662 aa
AA seq
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MAACRGSSSKWFFTREQIEATPSRRSGVDPDKELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMFHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQETPLDT
KSNAYLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQHKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEF
LQILEKTPSRLKRIRNWRTTQAAKKTKGDGSQANDPYPGPSLIHEHSLGDAIPGVSNSAF
SKAASSFPVPLPGHASGPLSLDSIASMQGTSYTFTAPSDWPQDTGGRLEGGSYSLKTDAL
GLQQGPPMNPNRPDKSGEFNPTKHEHKVGSGGGVGKQQQPIFPPPPPPAQKMSLDKYREK
HAAELAVQHKRRAEQQSFEPEGRDSYIPSVQSDHRKHMQLHPNPGSSSTTASPLKMKLAT
PGQDKVPSDKRDKGGSLKLRLPIPSQGGVASKEELKMKIKVSSERHSSSDEGGAKSKHSS
PLVSKEKHREHSTHRHHHKQHGHSHLHAAQHSGNGRGVPEGPAGAGPAVLRRPLGLGGVE
GVAGMAPSSGSSSSRKRGHPHVASHNHHSSKTSKSSKGGAGGLRTSQRPSETGQEASGEP
QS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtgccggggatcctcttcaaaatggtttttcacccgggagcaaatcgaagcc
acgccgtcccgccgttcgggagtggatccggacaaggagctatcttaccgacagcaggcg
gctaacctcattcaagatatgggccagagactcaacgtctcacaacttacaataaataca
gcaattgtttacatgcatagattttatatgttccactctttcaccaaattccacagaaat
atcatttctccaaccaccttattcctagctgcgaaagttgaagagcaacctcggaaactt
gagcatgttattaaagttgcccatgcttgtctaaaccctcaagagaccccgcttgataca
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaaaccatagtgctg
cagactttaggatttgaaataactattgaacatccacacactgatgtggtgaaatgttcc
cagctagtgagagcaagcaaggatctggcacagacttcctatttcatggctaccaacagc
ctccacctcaccaccttctgcctgcaacacaagcccacagtaatcgcctgcgtctgcatc
cacctggcctgtaaatggtccaactgggagatcccggtctccactgacgggaaacactgg
tgggagtacgtggacaactctgtcacactggagcttctcgatgaactgacgcatgagttc
cttcagattctggagaagacaccgagcaggttgaagaggatacgaaattggaggaccacg
caagctgccaagaagaccaagggggatggctctcaggcaaacgacccctacccaggaccc
tccctgatccacgaacattccctgggagatgccatccctggggtctccaactcagccttc
tccaaagccgcttcatcgttccctgtccctctgccagggcacgccagtgggcccctctcc
ctggactctatcgcgtccatgcagggcacctcctacaccttcacagcccccagcgactgg
ccccaggatacggggggtcgcttggagggaggaagctattccctcaaaacggatgcactt
ggcctccagcagggtcctccaatgaacccgaacagacccgataagtcaggagagttcaac
cctactaaacatgaacacaaggtcgggtcaggggggggtgtggggaagcaacaacagcca
attttccctccaccgcccccaccggctcagaaaatgtccctggacaagtatagagagaag
cacgctgctgagctggcggtgcagcataaacgcagggcagagcagcagagtttcgagcct
gagggcagggactcatatataccctctgtccaatcagaccacaggaaacacatgcagctc
caccctaaccctgggagcagcagcaccactgcctcccctcttaaaatgaagctcgccacg
ccaggccaggacaaggtcccctctgacaaacgggacaaggggggctcactcaaactccgc
cttccaattccttctcaggggggcgtggccagcaaagaggagctgaagatgaaaatcaag
gtgtcctcggagcgccacagctcttctgatgagggcggggccaagagcaaacattccagc
ccgctagtgagcaaggagaagcaccgagaacactcaacccaccgccaccaccacaagcag
cacggccactctcaccttcatgcagcacagcacagtggcaacggccgaggggtccccgag
gggccagcgggggccgggccagccgtcctccggagacccctagggctggggggtgttgag
ggggtggcgggcatggcccctagctctggttccagctcctcccgcaagagggggcaccca
cacgtcgcaagccacaaccaccactcctccaaaacgagcaaaagctccaagggcggcgca
ggtgggctacgaacatctcaacgccctagtgaaactggacaagaagccagtggagagccg
cagtcttga
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