Oncorhynchus nerka (sockeye salmon): 115110206
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Entry
115110206 CDS
T07952
Name
(RefSeq) perforin-1-like isoform X1
KO
K07818
perforin 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115110206
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Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
115110206
NCBI-ProteinID:
XP_029491514
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Position
LG26:8414506..8418814
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AA seq
566 aa
AA seq
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MSLFPAPAMPVNLLLFLLLFLPVCHGCHTGSFTECQKAPFVPGHNLAGEGFNIVKMQTSG
AFVVDVQKFMVGGHDGNCTLCTNTLMDGQVQKLPLSVLDWRTKVKCRRSLSSQMYESSTS
VLKETANAASISWKAGLGIKGIAGVAVGGTHSKTAMFARGHSTNDKFSFTSHEFKCKYYT
FRIRTQPPLSQEFQDSLKNLPSTYTHNTPAYSQFISIYGTHYIRNVHLGGRVHSTTAIRT
CKMAMSGLSLHSVSNCLGVEASGTIKGVTISAETKYCKSLSNKLKTGVSFGATFSDRVTE
VQGGNVEVEDILFNPDKKSGYKTWLKTLKKVPGVVSYQLSSLHFLARDNPILKANLRNAI
REYIQNYSVSTSCPSACKTGRRNKGCACICSGHRNVDSNCCPSKPGVARMNVTVVRATGL
WGDYFSKTDGYVKVLYGKQGGSTPVIWNNDFPHWNYRIQYGTVDLKSKETLRFEVWDRDN
RWNDNLLGKGSITPQRGMNVNQSFKLKHGTLYVSLSVVCGPSLKGAFCDQYAPSPGSQGR
LSYVHDWDRATETLPTLFQGSHRTFL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcttcccagcacctgccatgcctgtcaaccttctactcttcctcctcctcttc
ctccctgtgtgtcacggctgccacactggctccttcaccgaatgccagaaggctccgttc
gtccccggccacaacctggccggagagggtttcaacatcgtcaagatgcagacctccggc
gcctttgtggtggatgtgcagaagttcatggtgggtgggcacgacggtaactgcaccctg
tgcaccaacactctgatggacggccaggtccagaagttaccgctctccgtactggactgg
cgcacaaaggtgaagtgtcgtcggagcctcagcagccagatgtacgagtcgagcacctcc
gttctaaaggagaccgctaacgctgccagcatcagctggaaggctggcctgggaatcaag
ggcattgctggggttgctgttggaggcacacactccaaaactgccatgttcgccagaggc
cactccaccaatgacaagttctcttttactagccatgaattcaaatgcaaatattacacc
tttcgcatccgaacccagccccctctgagccaggagtttcaggactccctaaaaaacctg
cccagcacgtacacccacaacacacctgcctacagccaattcatctccatctatggcacc
cactacatccgcaacgtgcacctgggggggcgggtgcactccaccacagccatacgcacc
tgtaagatggccatgagcggcctctccctccattctgtcagcaactgtctgggggtggaa
gccagtggcaccatcaaaggtgtcacgatcagcgccgagaccaagtactgcaagtccctg
agcaataaactgaagacaggcgtaagcttcggagccaccttctcggaccgcgtcaccgaa
gtgcagggcggcaacgtcgaggttgaggacatcctcttcaaccctgacaagaagtctggc
tataaaacctggctgaagaccctgaaaaaggtccctggtgtggtctcctaccagctcagc
tccctgcatttcctggccagagacaaccccatccttaaggccaacctgcgcaatgccatc
agagagtacatccaaaattactctgtgtccacctcctgcccttctgcttgcaagacaggg
agacgcaacaaaggctgtgcctgtatctgtagcggtcacaggaatgtggactccaactgc
tgccccagtaaaccgggcgtggccaggatgaatgtgacggtggtccgagctacggggctc
tggggcgactacttctctaagacagacggctatgtcaaggtcctctacggaaagcaaggc
ggttccactcctgtgatctggaacaatgacttcccccactggaactataggattcagtat
ggaacagtggatttgaaaagtaaagaaaccttgcgctttgaggtgtgggaccgcgacaac
agatggaacgataacctgctaggaaagggctccattacccctcaaaggggcatgaacgtc
aaccaaagtttcaagttgaaacacggcactctttatgtctcactgtctgtggtttgcggc
cccagccttaaaggagccttctgtgatcagtatgccccctcacctgggtcccagggtagg
ctgagttacgtccatgactgggacagagcgacagagacgttacccaccctcttccagggt
tctcacaggaccttcctgtga
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