Oncorhynchus nerka (sockeye salmon): 115110221
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Entry
115110221 CDS
T07952
Name
(RefSeq) importin subunit beta-1-like isoform X1
KO
K14293
importin subunit beta-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115110221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115110221
03036 Chromosome and associated proteins [BR:
one03036
]
115110221
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
115110221
Pre-60S particles
115110221
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115110221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
IBN_N
HEAT_2
Cnd1
Arm
HEAT_EF3_N
Htt_N-HEAT_1
MMS19_N
DUF6869
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
115110221
NCBI-ProteinID:
XP_029491535
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Position
LG26:9125404..9144657
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AA seq
879 aa
AA seq
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MELITILEKTVSPDRNELEAAQKFLEQAAIENLPTFLVELSKVLANPGNTQVARVAAGLQ
VKNSLTSKDPDVKTRYQQRWLAIDANARMEIKNFVLQTLGTETYRPSSASQCVAGIACAE
IPVTQWPELIPQLVANVTDPSSTEHMKESTLEAIGYICQDIDPEQLQDNANQILTAIIQG
MRKEEPSNNVKLAATNALLNSLEFTKANFDKETERHFIMQVVCEATQCPDTRVSIVRVAA
LQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEA
TEASEQGQPPEHTSKFYAKGALQYLVPILTQTLTKQDENNDDDDWNPCKAAGVCLMLLAT
CCEDDVVPHVLPFIKEHIKHPDWRYRDAAVMAFGSILEGPELNQLKPLVIQAMPMLIELM
KDPSVVVRDTTAWTVGRICELLPEAAINEVYLAPLLQCLIEGLGAEPRVASNVCWAFSSL
AEAAYEGTDAAEEQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSAAYEALMEIVK
NSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQH
QDALQISDVVMASLLRMFQNTAGSGGVQEDALMAVSTLVEVLGADFQKYMDAFKPFLGIG
LKNYAEYQVCLAAVGLVCDLCRALMSNILPYCDEIMQLLLENLGNENVHRSVKPQILSVF
GDIALAIGGEFKKYLEIVLDTLQQASQAQVDKTDYDMVDYLNELREGCLEAYTGIIQGLK
GDKENVHPDVMLVQPRVEFILSFIHHIAEDEDHSNGVVANAAGLIGDLCTVFGKDVLKLV
EMRPLINDLLTEGRRSKVTITKMLATWATKELRKLKSQA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggagctgataacgatcctcgaaaaaacggtctctccggatcgaaatgaactggaggcg
gcacagaagtttctggagcaggcggcaattgagaatttgcccacgttcctggtggagctc
tccaaggtgctcgccaaccctggcaacacccaggtggctcgcgtggccgcagggctgcag
gtgaagaactcgctcacctccaaagacccggacgtgaagacgcgttaccagcagagatgg
ctggccatcgacgccaacgcccggatggaaatcaagaactttgttctgcagaccttgggc
acggagacgtaccggcccagctcggcctcccagtgtgtggccggcatagcctgcgcagag
atccccgtcacacagtggcccgagctcattccccagctggtggccaacgtgacggatccc
agcagcaccgagcacatgaaggagtccaccttggaggccatcggatacatctgccaggat
atagaccctgagcagctgcaggacaacgccaaccagatcctgacagccatcatccagggc
atgaggaaggaggagcccagcaacaacgtcaagctggctgcaacaaacgcactgctcaac
tcactggagttcaccaaagccaacttcgacaaagagacggagaggcactttataatgcag
gtcgtctgcgaggccacacagtgcccagacaccagagtgagtatcgtacgagtggctgcc
ttacagaacttggtgaagataatgtctttgtattatcagtacatggaaacgtacatgggc
ccagcactgtttgcgatcacaatagaagccatgaaaagtgacattgatgaagttgcctta
caaggaatcgagttctggtcgaacgtgtgcgacgaggagatggacttggccatcgaagcg
actgaggcgtcggagcagggccagcccccggagcacaccagcaagttctacgccaaagga
gccttgcaatacctggtgcccatcctcacccagacactcaccaagcaggacgagaacaac
gacgatgacgactggaacccgtgcaaggcggcgggcgtgtgcctgatgctgctggccacg
tgttgcgaggacgacgtggtgcctcacgtgttgcccttcatcaaggagcacatcaagcac
cccgactggcgctaccgagatgccgccgtcatggccttcggctccatcctggaggggccc
gagctcaaccagctcaaacccctcgtcatccaggcgatgcccatgctgattgagctgatg
aaggaccccagtgttgtggtgagggacaccacggcctggacggtgggcaggatctgtgag
ctgctgccggaggcggccatcaacgaggtgtacctggcccctctgctgcagtgcctcatc
gagggcctgggggccgagccacgcgtcgcgtccaacgtctgctgggctttctccagcctg
gcggaagccgcgtacgaaggcacagatgcagcagaggaacaggaggagcctgccacctac
tgcctctcctcctcctttgaactcatcgtccagaaactcctagaaaccacagacaggccg
gacggtcaccagaacaacctgcgtagcgcggcctacgaggccctgatggagattgtgaag
aacagcgccaaggactgctacccagccgtgcagaagaccaccctggtcatcatggagcgc
ctgcagcaggtcctgcagatggagtctcacatccagagcacgtcggacagaattcagttc
aacgacctccagtccctgctgtgtgccaccctgcagaatgtgctgaggaaggtgcagcac
caggacgcgttgcagatctccgacgtggtgatggcctcgctgctcagaatgttccagaac
actgccggctccgggggcgtacaggaggatgcactcatggccgtctcaaccttggtggaa
gtattgggtgctgactttcagaaatacatggatgcctttaaacccttcctgggaattgga
ttgaagaattacgcagaatatcaagtgtgtctggccgcggtgggcctggtgtgtgacctg
tgccgggccctgatgtccaacatcctgccttactgcgacgagatcatgcagctcctgctg
gagaacctggggaatgagaatgtgcaccggtcggtgaagccccagatcctgtcggtgttc
ggagacattgccctggccatcggaggagagttcaagaagtacctggagattgtcctggac
acgctgcagcaggcgtcgcaggcacaagtcgacaagacggactatgacatggtggactat
ctgaacgagctgcgggagggctgtctggaggcctacactggcatcatccagggcctgaag
ggagacaaggagaacgtgcaccctgacgtgatgctggtgcagcccagagtggagttcatc
ctgtccttcatccatcacatcgctgaagacgaggaccactctaatggcgtggtggcaaac
gccgccggacttataggagacctgtgcacggtgtttgggaaggacgtgttgaagctggta
gagatgcgacccctcatcaatgacctgctgacggagggtcggaggtccaaggtcaccata
accaagatgctggccacatgggccaccaaggagctgcgcaagctcaagagccaggcctga
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