Oncorhynchus nerka (sockeye salmon): 115110262
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Entry
115110262 CDS
T07952
Name
(RefSeq) F-box/LRR-repeat protein 20
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115110262
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115110262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
F-box
LRR_At5g56370
LRR_8
LRR_RPS2
LRR_EndoS
F-box_4
Motif
Other DBs
NCBI-GeneID:
115110262
NCBI-ProteinID:
XP_029491624
LinkDB
All DBs
Position
LG26:10580888..10601170
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AA seq
436 aa
AA seq
DB search
MGKEVNGVSRSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRSWNVLAL
DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDSALRTFSQNCRNIE
LLSLNGCTKITDSTCNSLSKFCPKLKHLDLASCTSITNLSLKALSEGCPLLEQLNISWCD
QVTKDGIQALVRCCPGLKGLFLKGCTQLEDEALKHIGAHCPELVTLNLQTCSQITDEGLI
TICRGCHHLQSLCVSGCANITDAILHALGLNCPRLRILEVARCSQLTDVGFTTLARNCHE
LEKMDLEECVQITDGTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGSGPCAHDRLEVIE
LDNCPLITDASLEHLKTCHSLDRIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP
SVGGSRQRFCRCCILL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaggttaatggtgtttcgcggagccggtttgagatgttctcaaacagcgac
gaggccgtcatcaataagaagctgcccaaggagctgttgctacgaatcttctcctttctg
gatgtggtgacactctgtcgctgtgcccaggtctcacggtcgtggaatgtgctcgccctg
gacggcagtaattggcagaggattgaccttttcgactttcagagagatattgaggggcga
gtggtggagaacatctcgaaacgatgtgggggattcctgaggaagttgagtctgcggggc
tgtctgggggtgggggacagcgctctgagaaccttctcccagaactgcaggaatattgag
ctgcttagtttgaatggctgcaccaagattactgacagcacatgtaatagcctcagtaag
ttctgtcccaagctcaagcacttggacctcgcctcctgtacctcaatcaccaacctgtca
ctcaaagcactcagcgagggctgtcctctgttagagcagcttaacatctcgtggtgtgac
caggtgactaaggatggcatccaggccttggtacgatgctgtcccggactcaaaggcctt
ttccttaagggctgcacacagttggaggatgaagcactgaagcacattggtgcacactgt
ccagagctggtcactctcaacttacagacgtgttcgcagatcacagacgaaggtctcatt
actatatgccggggctgtcaccatctgcagtcgctgtgtgtctcaggttgtgccaacatc
acagacgccatcctccacgccttgggactgaactgcccgcgcctcagaatattagaggtg
gctcgctgctctcagctcacagatgtgggcttcactacactagcaaggaattgtcatgag
cttgaaaaaatggacctggaagagtgtgtgcagatcacggacggcacactcatccagttg
tccatccactgccctcgtctgcaagttctgagcctgtctcactgtgagctgattactgac
gatggcatcagacatctgggaagcgggccctgtgcccacgaccggctggaggtgatcgag
ctggacaactgccccctgatcacggacgcctcgctggagcacctgaagacctgccacagc
ctggaccgcatcgagctctacgactgccagcagatcacccgcgcaggcattaagagacta
aggacccatctacctaacatcaaagtgcacgcgtatttcgcccccgtcaccccacccccc
tcggttggggggagtcgccagagattctgtcgctgctgtatcctgctatga
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