Oncorhynchus nerka (sockeye salmon): 115110331
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Entry
115110331 CDS
T07952
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115110331
03400 DNA repair and recombination proteins [BR:
one03400
]
115110331
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115110331
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Atypical E3
115110331
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
115110331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
DUF5457
zf-HC5HC2H
FANCL_C
UPF0270
Motif
Other DBs
NCBI-GeneID:
115110331
NCBI-ProteinID:
XP_029491764
LinkDB
All DBs
Position
LG26:12877272..12908411
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AA seq
274 aa
AA seq
DB search
MSRPLGESHKRFLQTMMVNGIIDGAKARALHRHCCETHGAHYAHDKLDEFIEVINAQLQP
MFMQIRKGMSEEDGLQYHALVNMAETDVTRMSTDYADNELELFRKTMDLIVDSDNGTASS
TDILNCADSLQTKKLKKRETEHVLNRLVQDKWLNEKNGDYSLSTRCIMEMEQYIRMLYQD
QVKVCHICHNVALQCQMCENPTCGIKIHTPCVARYFKGRTDPRCPACEDFWPHEIPDVYR
PPSSQSETQSAAKENTAPTPTPRSTAQTRRTRRS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaccactgggagaaagccataaaaggttcctgcaaactatgatggtcaatggg
atcattgatggtgccaaggcaagggctctccaccggcattgctgtgagacacacggtgca
cactatgctcatgataaactcgatgaattcatcgaggttatcaatgcccagctgcagccc
atgttcatgcagatcagaaaagggatgtctgaagaggatggtcttcagtaccatgctttg
gtgaacatggctgaaactgatgtgaccaggatgtcaactgattatgcagacaacgagttg
gaattatttcgaaaaacaatggacctaattgtggactctgacaatggaaccgcctcttcc
acggacattcttaactgtgccgacagcctccagacaaagaagctaaagaaaagagaaacg
gaacatgtactgaacaggcttgttcaggataagtggctgaatgagaaaaatggagactac
tctctctccactcgatgtataatggagatggagcaatatattcggatgttgtatcaagac
caggtcaaggtctgccatatctgtcacaatgtggccttgcagtgccagatgtgtgaaaat
cctacatgtggcatcaaaatccacaccccttgtgtcgccagatacttcaaaggaaggact
gatccacgatgccctgcctgtgaggacttctggccacatgagatcccagatgtgtataga
cctccgtcctctcagagtgagactcagtcagcagccaaagagaacacggcccccaccccc
actcctcggtctacagctcagacccggaggaccaggaggtcataa
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