Oncorhynchus nerka (sockeye salmon): 115110367
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Entry
115110367 CDS
T07952
Name
(RefSeq) rho GTPase-activating protein 27-like isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115110367
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115110367
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
WW
SH3_1
PH
PH_9
WW_TCERG1
SH3_9
Motif
Other DBs
NCBI-GeneID:
115110367
NCBI-ProteinID:
XP_029491819
LinkDB
All DBs
Position
LG26:14640468..14669154
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AA seq
1095 aa
AA seq
DB search
MSSLVCNMGLVLVEFEYEYTGRDGGLVSIKPNERYILLAKTNDHWWHVRKNEQARPFYIP
AKYVKELPAEIPSPLDFADPPSPDLVPVPAPVPVPVPKHYVPDRAETRAGDEVTIRLRSP
KRHQKTEHRMSTFGVPLEFHDPSPGALKRGGLNDSMPGLHSYIALEVPLTVPSPQANNSA
KHKKQLSLSSGVLFGSSLSVEDPLSLNPRAPSFSPADPLHRPSQAIPVERPLIPDAEVTG
GGIPHQEPLNEPECPLELEEGEKEKSSVEPEDESKEDSENIYESILDLKLDESPIIVEKA
PTVSPAAVAEPTPVIAPTSPSPTQTQVENASPNTAVYANITELKKNIPQSPPLVALSPDL
PLTQEGWQVHTDKDSGKEFYYRPATGQTTWTDPRSTLPSTDMELPKEALSVPALSMALSP
DLSPALSPALSPGLSMALSPALSPALSPALSPGLSPALSPASSQGSNWEQVLDETTGRNY
FYNPTSGATSWGAPEPIAPSSPVTEPPVLKLPDRGPVGPPLPKEDYLTEDHEAPDTSSSV
FPKDLLPIPQAKQAVIPRAILDSVPAGWKRSMEADGKTVFTSERTQEQWLKSVDQEGKTY
YYLRDGSKSQWNLPAELPVASRLPKVRNGVDQDSLPVLKNWRHTMGPAQFGPSQEDNRFF
PTHRRNVSDVTSEASSSGNSPETPHHTDRLGARSRLSHLSTDSHHEHTHLLEKAGILNKT
KVADNGKRIRKNWSPSWTVLHGGILTFHKDPKSAPSGNSNKTNQITPEYTVELRGATVGW
APKDKSSKKNVLELKTRHGCEYLVQYDTESIICDWHRIILDTVRQLDQDHLSEEEEEEPM
EKSSLASDRDKKTSSATKITPGISAESSDQGRVRTKLRKLLQKRPTLQSVKEKGYIRDNV
FGCHLDTLCHRENSTVPRFVEKCIRAVEIRGLDIDGIYRVSGNLAVIQRLRHKADHEENL
DLEDGQWEEIHVITGALKLFLRELPEPLFPYSFFDKFIAAIKIQDYPQKVSYFRDLVRSL
PLPNHDTMHLLFKHLLKVIEFGEKNRMSVQSVAIVFGPTLLRPQTESANITVYMVFQNQI
VELILKEFETVFAPS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttggtgtgcaacatggggctggtgctggtagagtttgagtacgagtacacg
ggccgcgacgggggcttggtgtccatcaagcccaacgaacgctacatcctgctggccaag
accaatgaccactggtggcacgtgaggaagaacgagcaagcaaggcccttctatatacct
gctaaatacgtcaaggagctccccgcagagatcccatccccactggactttgctgaccca
cccagtcccgatttggtcccggttcctgcgccggtgccagtgccagtcccaaaacactac
gtaccagaccgggcagaaacgagggctggagatgaggtgactatccgcctccgctccccg
aaaagacaccagaagactgagcaccgcatgtccacatttggcgtacccttagaattccac
gacccgtctcctggggcattgaagcgcggcgggctgaacgactcgatgccgggccttcac
tcctacattgcccttgaggttccattaacagtgccctcgcctcaagccaacaatagtgcc
aaacacaagaagcaattaagcctgagttccggtgtgctcttcggctcctccctgtcggtg
gaggatcctctctccctgaacccccgagcccccagcttcagcccagctgaccccctccac
cgaccctcccaggccatcccagtggagaggcccctcattcctgatgccgaggtcaccggt
ggcgggattccccatcaggaacctctgaatgagccggaatgtcctctggagctggaggag
ggagaaaaggagaaatctagtgtggagcctgaggacgaatccaaggaggactctgagaat
atttatgaatccatattggacctgaagctggatgagtcccctataatagtggagaaggcc
ccgacagtgagtcctgctgctgtggctgaacctacacctgttatcgctcccacttctcca
tctccaacacagacacaggtggaaaatgccagccccaacactgctgtttacgccaacatc
accgagctgaagaaaaacatcccacaatccccgccgttagtagctctgagtcctgacttg
ccccttacccaggagggatggcaggtgcacactgacaaggacagcgggaaagagttctat
taccgcccagccacgggccaaaccacttggaccgacccccgcagcaccctcccctccaca
gacatggagctgcccaaggaggcgttgtctgtcccggccctgtccatggccctttccccg
gacctgtccccggccctgtctccggccctgtccccgggcctgtccatggccctgtccccg
gccctgtccccggccctgtccccggccctgtccccgggcctgtccccggccctgtcccca
gcctcatcccagggttccaactgggaacaggtgttggatgagaccaccggtcgaaactac
ttctataaccccacctctggggccacgtcctggggagctccggagcccatcgccccctcc
tctcctgttactgagcctcctgtgctgaagctcccagacagaggaccggtagggccccct
ctcccaaaggaagactacctgacagaagaccacgaggctccagacacttcctcctcggtg
ttccccaaagacctcctaccaattccgcaggctaaacaggccgtcataccccgagccatt
ctagacagtgtcccggcgggctggaagcgctccatggaggcagatgggaagaccgtattc
accagcgaacgcacacaggagcagtggctcaagtctgtggatcaagaaggaaagacgtac
tactacctgagagacggctccaaatcccagtggaaccttccagcagagctcccggttgca
tccaggctgcccaaggtgaggaatggagtggaccaggacagtctgccggttctgaagaac
tggagacacaccatgggcccagctcagtttggcccctcccaagaagacaacaggttcttt
ccaacacataggagaaacgtttcggacgtcaccagtgaagcatccagctcaggcaactcc
cctgagacgccacaccatactgataggttgggagcacggagtagactgtcacatctgagc
acagactcacatcatgagcacacacatctactggagaaggcaggtatcctgaacaaaacc
aaggtggccgacaatgggaaaagaattaggaagaattggagtccgtcatggacagtgctg
catggaggcattctcacgtttcacaaagaccctaaatctgcaccctcgggaaactctaac
aagaccaatcagatcaccccagagtacacagtggagctgcggggagccactgtgggctgg
gcccccaaggacaagtccagcaagaagaacgttctggagttgaaaacgcgtcatgggtgt
gagtacctggtccagtacgacacagagagcatcatttgtgactggcacaggatcatactg
gacactgtcagacagctggaccaagatcacttgtcggaagaggaagaggaagagcctatg
gagaaatcttcacttgcttcagacagagacaagaagaccagctcagccaccaaaattacg
ccaggcatcagtgccgagtcatcagatcaggggcgtgtccgcaccaaactacgcaagtta
ctccagaagaggcccacactgcagtcagtgaaggagaagggctacataagagataacgtg
tttggttgtcatctggacacgctgtgccatcgagagaacagcactgtgcccaggtttgtg
gagaagtgcatcagggcagtggagattagaggtctggacattgatgggatctacagagtt
agtgggaatctagctgtcattcagagactacgccacaaagcagatcatgaggaaaatctg
gacctagaggatggtcagtgggaggagatccatgtgatcacgggggcgctaaagctcttc
ctgagggagctgcctgaacctctcttcccttacagcttcttcgacaagtttatcgctgcc
atcaaaatacaggactatcctcagaaggtgtcatacttccgtgacctggtgaggtccctt
cccctgcccaaccacgataccatgcacctccttttcaaacatctcctcaaagtgattgag
tttggggaaaagaaccgtatgtcagtccagagtgtggccatcgtgtttggccctacgtta
ctcaggccccagactgagtcggccaacatcaccgtttacatggtcttccagaatcagatt
gtggagctcatcctcaaagagtttgagacagtatttgcccccagctga
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