KEGG   Oncorhynchus nerka (sockeye salmon): 115110403
Entry
115110403         CDS       T07952                                 
Name
(RefSeq) histone deacetylase 5-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    115110403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115110403
Enzymes [BR:one01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     115110403
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     115110403
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln Clp1
Other DBs
NCBI-GeneID: 115110403
NCBI-ProteinID: XP_029491876
EnsemblRapid: ENSONEG00000018438
LinkDB
Position
LG26:14946336..15033846
AA seq 1138 aa
MLLRPTVPGLCAMLQTIYETESCFSSDAVSSREQPLELLPLSQVSAMPSAAVEVKTTLPS
GMQSPVGGSEQGVGGGPVDLRTDPRLGPLGGGVDPAMREQQLQHELLLLKQQQELQKQLL
FAEFQKQHEVLTRQHEVQLQEHLKASLQQQQEILAAKRQQELEQKRKLEQQRHEELEKQR
LEQQLLMLRNKEKGKESAIASTEVKLKLQEFLLNKKEPGTPGGLNHSFPQKCWGAHHTSL
DPNSPPQSNTLGMPPSYKLPPLLGSYEGRDDFPLRKTASEPNLKVRSRLKQKVAERRSSP
LLRRKDGTVISTFKKRAIEISVSSMCSSAPGSGPSSPNSSNSAIAENGSSGSVPNIHAEQ
LRSLHQTLNADGTVSPLSLYTSPSLPNISLGLPANSHLTANQKLLQEAERQAIQTMRQGG
ALTGKFVSTSSLPASCLPPGMQHDLDSTQAPNSHSSHSSLLQHVLLLEQARQQSALLSVP
MYGQSPLVTGERVSNSMRTVNKLPRHRPLSRTQSAPLPQSPQALQQLVMQQQHQHFLEKQ
KQYQLNKILSKGVELPRQPPTHPEETEEELTETQEMQEEGAESECLGEGRPQEQRLQKEE
SGVTSPPSERLLTPLKGESTESDLEEEDDEDEAIELRECDEEGVPYGQHHLQQLNVFQAS
LSISGMTHRPLGRAQSSPATASIKGAPMGEVPIKHLFTTGLVYDTFMLKHQCMCGNTHIH
PEHAGRIQSVWSRLQETGLLGRCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDS
KKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSGAVRMAVGCVIELAFKVAAGELKNGF
AVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVSKVLIVDWDIHHGNGTQQAFYND
PNVLYISMHRYDDGNFFPGSGAPEEVGVGPGVGFNTNIAWTGGVEPPMGDVEYLTAFRTV
VMPIANEFSPDVVLVSAGFDAVEGHQSPLGGYNVTAKCFGHLTKQLMKLAGGRVVLALEG
GHDLTAICDASESCVAALLGDELDPLPQAVLQQKPCPKAAASLERVIEIQSKHWSSLQRL
APTVGQSLMDAQRREKDEADTVTAMASLTVDTEQAAASTVSTETSRSTEEPMEEEPVL
NT seq 3417 nt   +upstreamnt  +downstreamnt
atgcttttaaggcccaccgtgccggggctgtgcgcaatgttgcagaccatctatgagacc
gagtcctgcttctcctcagacgcagtgtccagcagggagcaacctctggagctgctgccc
ctgtcccaagtgtcggccatgcccagtgctgctgtggaggtgaagacaactctcccctcg
gggatgcagagccctgtgggcggcagtgagcagggtgttggaggtggtcccgtggacctg
aggactgatcccaggctgggacccctgggcggaggagtggacccagccatgagggagcag
caactgcagcatgaactgctgctcctcaagcagcagcaggagcttcagaaacagcttctc
ttcgctgagttccagaagcagcatgaggtgctgacacgtcagcatgaggttcagctgcag
gagcacctgaaggcgtccctgcagcagcagcaggagatcctggcggccaagcggcagcag
gagctggagcagaagaggaagctggagcagcagaggcatgaggagctggagaaacagagg
ctggagcagcagctcctcatgctacgcaacaaggagaagggcaaagagagtgccattgcc
agtacggaggtgaagctgaagctccaggagttcctcctgaacaaaaaagagcctggcaca
cctggcggactaaaccattccttcccccagaaatgctggggggcccaccacacctctctg
gaccccaactccccccctcagagtaacactctgggaatgccgccctcctacaaactgccc
ccactactggggtcctacgagggcagggacgatttccctctccggaaaactgcctccgag
cccaatttgaaggtgcgttcgcggttaaaacagaaggtagctgagaggcggagcagtcct
ctgctgaggaggaaggacgggacagtgataagcaccttcaaaaagagagccatcgagatc
tctgtgtcctccatgtgcagcagtgcccctggctccgggcccagctcgcccaacagctcc
aacagcgccatcgcggagaacggctccagcggatctgtcccaaacatccacgcagagcag
ctgcggtccctccaccagacccttaacgctgatgggacagtcagtccgctgagcctctac
acgtccccctcgctgcctaacatctccctgggcctgccagccaactctcacctcaccgcc
aatcagaagctgttgcaggaggcggagaggcaggccatccagaccatgcgtcagggtggg
gctctgacgggcaagtttgtcagcacctcgtccctgccggcatcatgcctgccacctggg
atgcaacacgacttagactccacccaggcccccaacagccacagcagtcactcctcccta
ctgcagcacgtcctcctgctggagcaggcccgccagcagagtgccctcctctcagtcccc
atgtacggtcagtcgccgttggtgacgggggagcgggtgtccaacagtatgcgcacagtg
aataagctaccacgccaccggcccctgagccgcacgcagtctgcgcccctcccccagagc
ccccaggccctgcagcagctcgtcatgcagcagcagcaccagcacttcctggagaagcag
aagcagtaccagctcaacaagattctgtcaaaaggggtggagcttcctcgccaaccgccc
acccaccccgaggagacagaggaggagctcacagagacacaggagatgcaggaggagggg
gcggagtctgagtgtctgggggaggggcgtcctcaggagcagaggctccagaaggaagag
tcgggggtgacgtcgcccccctcagaacgcctgctgacccccctgaagggcgagagcaca
gagagcgacctggaagaagaggatgatgaagacgaggccatcgagctgagggagtgtgat
gaggagggcgtaccttacggccaacatcacctgcaacagctcaatgtgttccaggcatcc
ctgtccatttcgggcatgacccacagacctctgggaagggcccagtcctcccctgccact
gccagcatcaagggggctcccatgggtgaggtccccatcaagcacctcttcactacaggg
ttggtgtacgacacctttatgctgaagcaccagtgtatgtgtgggaacacccacatccac
ccagaacacgccggccgcatccagagtgtgtggtcccggctgcaggagactgggctcctg
ggccgctgtgagaggattcgggggaggaaggccacgttggatgagatccagactgtgcat
tcagaataccacacactgctgtatggaaccagtcccctcaacagacagaaactagacagc
aagaagctcttaggtccaatcagtcagaagatgtatgcggtgttgccctgtggaggcatt
ggggtggacagtgacactgtgtggaacgagatgcactcctcgggcgctgtcagaatggct
gttggctgcgtcatcgagctggctttcaaagtggccgccggggaactgaagaacggcttt
gccgtggtgcgtccaccaggccatcacgctgaggaatccactgccatgggcttctgcttc
ttcaactcagtggccatcacagccaagctgctgcagcagaaactaggagtgagcaaggtc
ctcatcgtggactgggacattcaccatggtaacgggacacagcaggctttttacaacgac
cccaatgtactttacatttccatgcatcgctacgacgatggaaacttcttccccggcagt
ggggctcctgaagaggtgggggttggacctggtgttggcttcaacacaaacatcgcttgg
acagggggcgtagaaccgcccatgggtgacgtggagtacctgactgccttcaggacggtg
gtgatgcccatagccaacgagttctcccctgacgtggtcctagtgtccgctgggtttgat
gccgtggagggccaccagtcccctctgggaggatacaacgtcactgctaaatgtttcggc
cacctcaccaagcagctgatgaagctggcggggggacgtgtggtcctggcgctggaagga
ggtcacgacctcacggccatctgtgatgcctccgagtcctgtgtggcggccctgctcggc
gatgagttggaccccctgccacaggctgtcttgcaacagaagccctgtccaaaagctgct
gcctctctggagagggtcatcgagatacagagtaaacactggagctctctccaaaggttg
gctcccacggtgggccagtccttaatggatgcccagcggagagagaaggacgaggccgac
acggtcaccgccatggcatcgcttaccgtggatactgagcaggccgccgcttccaccgtc
tccacggagaccagcaggtctacagaagagccaatggaagaagagcccgtcttgtag

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