Oncorhynchus nerka (sockeye salmon): 115110431
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Entry
115110431 CDS
T07952
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115110431
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115110431
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115110431
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115110431
NCBI-ProteinID:
XP_029491945
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All DBs
Position
LG26:15714331..15731501
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AA seq
638 aa
AA seq
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MRGGSSYGDRDRDRGRDRGSPRFGSSRGPPPNKKFGNPGERLRKKKWDLNELPKFEKNFY
NEHPDVQRMSQYDLEEFRRKKEITIRGSGCPKPVSSFSQAHFPQYVMDVLMQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAHEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLKDYVQ
INVGALELSANHNILQIVDVCTESEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKTQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVNTGR
GGGGRSRFRGNGSNPSNPNLMYQDECNRRMRPTVGSKDSRGSSSGTGSSSSFSRDSRDGG
SSRAGDRSSSSYRDRRDSRSYGSSSSYSQYKSGSSNGGQDQSAGQFGSVSRSSKPPLPPS
GPQPLMAQKFTPAKPMMGLMGHSPFQFASPPPPTSQRK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcggttcatcgtatggagatcgagacagggaccgtggtcgcgacagggggagt
cctcgttttgggtctagcagaggtccccctcccaacaagaagtttgggaacccaggggag
cgtttgcgcaagaagaaatgggacctaaacgagcttccaaagtttgagaagaacttttac
aatgaacatccagatgttcagcgcatgagccagtatgacttggaggagtttcgcaggaag
aaggagatcactatcagggggtcaggctgcccgaagcctgtcagtagcttctcccaggcc
cattttccccagtatgtgatggatgtgctgatgcagcagaactttaaggagcccacagct
atccaggcacaaggcttcccactggccctgagtggcagggacatggtgggcatcgcacag
acaggttctgggaaaaccttatcgtatctcctgcctgccattgtgcacattaaccaccag
ccctacctagaaagaggagacggaccaatctgtttggttctggcaccaactcgagagctg
gcccagcaggttcagcaagtggcgcatgaatacggcaagtcatcacgcatcaagagcacc
tgtgtctacgggggagctcccaagggaccccagatccgtgacctggagagaggtgttgag
atctgcatcgccaccccgggtcgtctcattgacttcctggaggcagggaagaccaaccta
cggcgctgcacctacttggtgctggacgaggctgacaggatgctggacatgggctttgag
cctcagatccgcaagattgttgaccagattaggcctgacagacagaccctgatgtggagt
gccacttggcccaaggacgtgcggcagctagcagaggacttcctgaaggactatgtccag
atcaacgtgggagccctggagctgagcgccaaccacaacatcctgcagattgtggacgtg
tgcacggagagtgagaaggacaacaagctgctccagctgatggaggagatcatggctgag
aaggagaacaagaccatcatctttgtggagaccaagaaacgctgcgatgatctgacccgc
agaatgagacgtgatgggtggccagcgatgtgtatccatggtgacaagactcagccagag
agagactgggtgctgacagagttccgtagtggcaaggctcctattcttattgctactgat
gtggcctcacgtggtttggatgtggaggatgtcaaatttgtcatcaattatgactaccca
aactcctctgaggactacatccaccgtatcggccgtacggcccgtagcaccaacaagggt
acagcctacacattcttcactccgggcaaccttcgtcaggcccgtgagctcatccgtgtt
ctagaggaggcccggcaggccataaaccccaagctgctgcaactggtcaacactggccgt
ggaggaggaggcaggtcacgtttccgtggcaacggctccaaccccagcaaccccaacctg
atgtatcaggatgagtgcaaccggcgcatgcgccccaccgtaggcagcaaggacagccgg
gggagcagcagcggcacggggagcagcagcagcttcagccgcgacagccgagatggaggg
agcagccgcgccggggacaggtcgtcctcttcctacagggacaggagggacagccgcagc
tatggctccagctcctcctacagccagtacaagtccgggagcagcaatggggggcaagat
cagtcagcggggcagtttggttcagtcagcaggtccagtaagccccctctacccccctca
gggccgcagcccctcatggcccagaagtttaccccagccaagcccatgatgggattaatg
gggcactcgcccttccagtttgcttcgccaccccctccaacctcacaaaggaagtaa
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