KEGG   Oncorhynchus nerka (sockeye salmon): 115110431
Entry
115110431         CDS       T07952                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
  KO
K13178  ATP-dependent RNA helicase DDX17 [EC:5.6.2.7]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115110431
Enzymes [BR:one01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     115110431
Spliceosome [BR:one03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    115110431
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2 Cas3-like_C_2
Other DBs
NCBI-GeneID: 115110431
NCBI-ProteinID: XP_029491945
LinkDB
Position
LG26:15714331..15731501
AA seq 638 aa
MRGGSSYGDRDRDRGRDRGSPRFGSSRGPPPNKKFGNPGERLRKKKWDLNELPKFEKNFY
NEHPDVQRMSQYDLEEFRRKKEITIRGSGCPKPVSSFSQAHFPQYVMDVLMQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAHEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLKDYVQ
INVGALELSANHNILQIVDVCTESEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKTQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVNTGR
GGGGRSRFRGNGSNPSNPNLMYQDECNRRMRPTVGSKDSRGSSSGTGSSSSFSRDSRDGG
SSRAGDRSSSSYRDRRDSRSYGSSSSYSQYKSGSSNGGQDQSAGQFGSVSRSSKPPLPPS
GPQPLMAQKFTPAKPMMGLMGHSPFQFASPPPPTSQRK
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgaggggcggttcatcgtatggagatcgagacagggaccgtggtcgcgacagggggagt
cctcgttttgggtctagcagaggtccccctcccaacaagaagtttgggaacccaggggag
cgtttgcgcaagaagaaatgggacctaaacgagcttccaaagtttgagaagaacttttac
aatgaacatccagatgttcagcgcatgagccagtatgacttggaggagtttcgcaggaag
aaggagatcactatcagggggtcaggctgcccgaagcctgtcagtagcttctcccaggcc
cattttccccagtatgtgatggatgtgctgatgcagcagaactttaaggagcccacagct
atccaggcacaaggcttcccactggccctgagtggcagggacatggtgggcatcgcacag
acaggttctgggaaaaccttatcgtatctcctgcctgccattgtgcacattaaccaccag
ccctacctagaaagaggagacggaccaatctgtttggttctggcaccaactcgagagctg
gcccagcaggttcagcaagtggcgcatgaatacggcaagtcatcacgcatcaagagcacc
tgtgtctacgggggagctcccaagggaccccagatccgtgacctggagagaggtgttgag
atctgcatcgccaccccgggtcgtctcattgacttcctggaggcagggaagaccaaccta
cggcgctgcacctacttggtgctggacgaggctgacaggatgctggacatgggctttgag
cctcagatccgcaagattgttgaccagattaggcctgacagacagaccctgatgtggagt
gccacttggcccaaggacgtgcggcagctagcagaggacttcctgaaggactatgtccag
atcaacgtgggagccctggagctgagcgccaaccacaacatcctgcagattgtggacgtg
tgcacggagagtgagaaggacaacaagctgctccagctgatggaggagatcatggctgag
aaggagaacaagaccatcatctttgtggagaccaagaaacgctgcgatgatctgacccgc
agaatgagacgtgatgggtggccagcgatgtgtatccatggtgacaagactcagccagag
agagactgggtgctgacagagttccgtagtggcaaggctcctattcttattgctactgat
gtggcctcacgtggtttggatgtggaggatgtcaaatttgtcatcaattatgactaccca
aactcctctgaggactacatccaccgtatcggccgtacggcccgtagcaccaacaagggt
acagcctacacattcttcactccgggcaaccttcgtcaggcccgtgagctcatccgtgtt
ctagaggaggcccggcaggccataaaccccaagctgctgcaactggtcaacactggccgt
ggaggaggaggcaggtcacgtttccgtggcaacggctccaaccccagcaaccccaacctg
atgtatcaggatgagtgcaaccggcgcatgcgccccaccgtaggcagcaaggacagccgg
gggagcagcagcggcacggggagcagcagcagcttcagccgcgacagccgagatggaggg
agcagccgcgccggggacaggtcgtcctcttcctacagggacaggagggacagccgcagc
tatggctccagctcctcctacagccagtacaagtccgggagcagcaatggggggcaagat
cagtcagcggggcagtttggttcagtcagcaggtccagtaagccccctctacccccctca
gggccgcagcccctcatggcccagaagtttaccccagccaagcccatgatgggattaatg
gggcactcgcccttccagtttgcttcgccaccccctccaacctcacaaaggaagtaa

DBGET integrated database retrieval system