Oncorhynchus nerka (sockeye salmon): 115110486
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Entry
115110486 CDS
T07952
Name
(RefSeq) sterol regulatory element-binding protein 2-like isoform X1
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115110486
04131 Membrane trafficking [BR:
one04131
]
115110486
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
115110486
Membrane trafficking [BR:
one04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
115110486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
DUF1757
Motif
Other DBs
NCBI-GeneID:
115110486
NCBI-ProteinID:
XP_029492051
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All DBs
Position
LG26:complement(17120760..17137080)
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AA seq
1218 aa
AA seq
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MDSNVSGEYISTMENMDPTLSELGDEFTLGDIDEMLQFVSNQVGDFPDLFEDQMSSAGSL
QNGAGATPRPPPQAPQTPQTTTTVYQHSNVTLTPTQTLAQQSLPLTPPQTPVQTFSSGQH
QIRAPPLLQPRPQVQAIQPQPQVQAIQPQMQAIQPQPQMQAIQPQPQMQAIQPQMQAIQP
QMQAIQPQMQAIQPQMQAIQSQQQPTIQVHSQSIPMQAHSFPVHTLVQTHNQALPIQSQA
QTVMITSSGGQSRFIQNPVICHQSPTTSFQVLQPQMQSIMTSPQVQPMTIQHQRLLQTGQ
TIQTLSTAPTVHTMQQQVQQLPLLVHQPQILKTENLVLTTLKPDGTQVLSTMQNPGITTL
THPIQTQTLQVPTLMGSNILTTVPVMMGGGDKLPIKQLSSGTSHCVGGNRQVMDHGMVMG
PGGVMKEGERRTTHNIIEKRYRSSINDKILELRDLVMGGDAKMHKSGVLRKAIDYIKYLQ
QVNHKLRQENLALKMNKSVVLSDDVEMKPEMLMMSPPASESGSGSPREFSPYCIDSEPGS
PLLDHEQVKSEPGSPSSVGVMDRSRLLLCALTFFCLSLNPLPSLLGSEAQSSSGLTSAHR
ASRTLFSLPSQTHNFATWLWCLLPWLTVWMLSGVGAVWGCVRVLYLWEPVTPLHSPKSVS
FWRQRKQADLHLNRGDYTAAMASLKTCLSVLTRALPTTSWDLLFSLSWNLIRYCLHHPTP
LGWLVRQVGGKHKGEESKTSSRDAALVYHRLSQLQLTGKLPQRSGLWALSLSMSAVNLSE
SAQSKMAPAQQAQIYVTAATALRTVLGHHLSCLPGYLLSCAEGVASQSDSKPIPDCLHWL
FTPLGRQFFLSCDWSVKSESREGVYTSQRDPADPIAQLHRCFCEKLLERAVHSLIQPHTD
REAGKPKNDSGEFSSALEFLHLLNSCTEESSSPPFPAPPNHTTMPVADPVSRWWALVLKA
AAHWLQGDDVAVRSLLAEAERMPRALHTLDHPLPKAVLLLCKAVQMSLSPLKGEGAVACL
SHCDRASSYLRTSISVPLSAQSGNGLNKGVELLVCDLLLTLRTSLWQRGSSSNGEPGPAP
GSQLAGFQRDLSSLRRLGQCYRQAQHKVFLHETTVRLMAGASPTRTHQLLEHSLRRRTNN
PGYTTAEGDCVLGERERAHAILLACRHLPLPLLTPPGHRARLLAEAKRTLERVGDRRSLQ
DCQQILLRLSGGTTIAAS
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggacagtaacgttagtggggagtatatctcgaccatggaaaatatggatccgactttg
tcagaactaggggacgaatttacgctgggagacatcgatgagatgctccaattcgtcagc
aaccaggtgggggacttccccgacctctttgaggaccagatgtcctctgcaggctcccta
cagaacggtgctggggccaccccacgcccaccccctcaagccccacagacaccccagacc
actaccacagtttaccagcacagcaacgtgaccctcacccccacccaaacactggcccaa
cagtccctgcccctcaccccaccacagaccccagtccagacgttctcttcagggcagcat
cagatccgcgcccctcccctgctccagccccggccccaggtgcaggccatccagccccaa
ccccaggtgcaggccatccagccccagatgcaggccatccagccccagccccagatgcag
gccatccagccccagccccagatgcaggccatccagccccagatgcaggccatccagccc
cagatgcaggccatccagccccagatgcaggccatccagccccagatgcaggccatccaa
tcccagcagcaacccaccatccaggtccacagccagagcatccccatgcaggcgcatagc
ttccctgtgcacaccctggtccagacccacaaccaggctctgcccatccagtcccaggcc
cagacggtgatgatcacatctagcggtggccagtcccgcttcatccagaaccctgtcatc
tgccaccagagtcccactacaagcttccaagtcctccaaccgcagatgcagagcataatg
acatcaccacaggttcaacccatgaccatccagcaccagagactactgcagactggccag
accatccagactctctctacagcacctacagtccacaccatgcaacagcaggttcaacag
ctaccccttctggtccaccagcctcagattctgaagacagagaatctggttctgaccacc
ctgaaacctgatgggacacaggttctgtccaccatgcagaaccctgggatcaccaccttg
acccatcctatccagacacagactctacaggtaccgactctgatgggcagtaacatcctg
accactgtgcctgtcatgatgggagggggagacaagctgcccatcaaacagttgtcgtca
ggcacctcccactgtgtaggtgggaacaggcaggtgatggaccacgggatggtgatgggt
ccagggggggtgatgaaggagggggagaggagaaccacccacaacatcatcgagaagagg
taccgctcctccatcaatgacaagatcctggagctgagggacctggtcatgggcggcgac
gccaagatgcacaagtcaggagtgctgaggaaagccatcgactacatcaaatacctgcag
caggtcaaccacaaactacggcaggagaacctggccctcaagatgaacaagtcagtggtg
ctgtctgatgatgtggagatgaaaccagagatgctgatgatgtcacctccagcatcagag
tctggttcaggatctcctcgtgagttctctccatactgcatcgactcagagcctggcagt
cccttactggaccatgagcaggtgaagagtgagcctggctcaccctcttccgtgggtgtg
atggatcgctctcgtctcctcctctgtgccctcaccttcttctgcctctccctcaacccc
ctgccctctctcctgggatctgaggcccagagcagctctggcttgacctctgcacacaga
gcctccaggacactgttctcattacccagccagacacacaactttgcgacctggctttgg
tgcctgttgccatggttgacggtgtggatgttgagcggtgttggggcagtgtggggctgt
gttagggtcctctacctctgggagcctgtcacccccctccactcgcccaaatccgtctcc
ttctggaggcagcgtaaacaagcagacctacatctcaacagaggtgactatacagcagct
atggccagtttgaaaacctgcctgtcagtcttgaccagagccctgcccaccaccagttgg
gacctcctcttctcactctcctggaacctgattcgctactgtctgcatcaccccacccct
ctgggctggctggttcgccaggttggtgggaagcacaagggggaggagtccaagaccagc
tcccgggacgcagctctggtctaccataggctgagccagctgcagctcacagggaagctt
ccccagcgcagtggcctgtgggctctgtctctgtctatgagtgctgtcaacctcagtgag
agcgcccaaagcaagatggcccctgcccagcaggcccagatctatgtcacagcggcaaca
gctctgcgcactgtactgggccaccacctctcctgcctgcctggttacctgttgagctgt
gctgagggtgtggccagccaatcagactccaagcccatccctgactgtctgcactggctc
ttcaccccattgggcaggcagttcttcctcagctgtgattggtctgtgaagtctgagagc
agagagggcgtgtacacttcccagagagacccagctgaccccatcgcccagctgcatcgt
tgtttctgtgagaagctgctggagagagctgtgcactccctcatccagccccacactgac
agggaggcaggcaagcccaagaacgactcgggggagttctccagtgccttggagtttctc
cacctattgaacagctgcacagaggagtcctcttctcctcccttcccagccccacctaat
cacaccaccatgccagtggcagacccagtgagtcgctggtgggcattggtcctaaaggct
gctgcccattggctgcaaggagatgatgtcgctgtgaggtcactgctggcagaggcagag
cgcatgcccagagctctccataccctcgatcatccgttgcccaaggctgtgctgctgctg
tgtaaggcggtgcagatgagcctgtctcctctgaagggagagggggcggtggcctgtctg
tctcactgcgacagggccagcagctacctgcgcaccagcatctctgttcccctgtccgcc
cagtctggaaatgggctcaacaagggggtggagctcctggtctgtgacctcttgctgacc
ctcaggaccagcctatggcaaagaggaagcagcagcaatggggagccaggccccgcccct
ggctcccaattggctggattccagcgggacctgagttcattgcgaaggctgggccaatgc
tacagacaggcacaacacaaggtgttcctgcatgagaccacagtgaggctgatggctgga
gccagtcccacccgcacacaccagctactggagcacagcctccgacgcaggaccaacaac
cctgggtacaccacggcagagggtgactgtgttctgggtgagcgtgaaagggctcatgcc
atcctgctggcgtgccgccacctacccttacccctgctgaccccaccagggcaccgcgcc
cgcctgctggccgaggccaagcgcacccttgagcgtgtgggcgaccgccgctccctacag
gactgccaacagatcctgctccgcctcagtgggggcaccaccatcgcggcctcctga
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