Oncorhynchus nerka (sockeye salmon): 115110527
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Entry
115110527 CDS
T07952
Name
(RefSeq) rho GTPase-activating protein 27-like isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115110527
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115110527
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
WW
SH3_1
PH
PH_9
SH3_9
Motif
Other DBs
NCBI-GeneID:
115110527
NCBI-ProteinID:
XP_029492124
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All DBs
Position
LG26:complement(18027945..18063235)
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AA seq
1103 aa
AA seq
DB search
MSSLVCNMGLVLVEFEYEYTGRDGGLVSIKPNERYILLAKTNDHWWHVRKNEQARPFYIP
AKYVKELPAEIPSPLDFADPPSPDLVPVPGPVPVPVPKHSVPDRAETRAGDEVTIRLRSP
KRHQKTEHRMSTFGVPLEFHDPSPRALKSGELTDSLPGLHSTVALEVPLTVPSPQANNSA
KHKKQLNLSSGVLFGSSLSVEEPLSLNPRAPSFSPADPLQRPSQAIPVERSLIPDAEVTG
GGIPHQEPLNEPECPLELEEGENEKSSVEPEDESKEDTENIYESILDLKLDESPIIVEKA
PTVSPAAVAEPTPVITPTSPTQTQAENASPNTAVYANVTELKKNIPQSPPLEALSPDLPL
TQEGWQVHTDKDSGKEFYYLPATGQTTWADPRSTLPSTDMELPKEALAIPALSMALSPAL
SPALSPALSPALSPALSPALSPALSPGLSPALSPALALSPALSPALALSPASSQGSNWEQ
GFDETTGRNYFYNLTSGATSWGAPEPIAPSSPVTEPPVLKLPNRGPPPLPKEDYLTEDHE
APDTSSSVFPKDILPMPQAKLAVIPRAILDSVPAGWKRSLEADGKTVFTSERTQEQWLKS
VDQEGKTYYYLRDGSRSQWNLPAELPGAASLSKVGNGVDQDSPLVLKNWRHTMGPAQFGP
SQEDNRFFPTHRRNVSDVTSEASSSGNSPETPRHTDRLGVRSRLSHLSTDSHHEHTHLLE
KAGILNKTKVADNGKRIRKNWSPSWTVLHGGILTFHKDPKSAPSGNSNKTNQITPEYTVE
LRGATVGWAPKDKSSKKNVLELKTRHGCEYLVQYDTESIICDWHRIILDTVRQLDEDHLS
EEEEEEPMEKSPLASDRDKRTSSATKITPGISAESSDQGRVRTKLRKLLQKRPTLQSVKE
KGYIRDNVFGCHLDTLCHRENSTVPRFAEKCIRAVEIRGLDIDGIYRVNGNLAVIQRLRH
KADHEENLDLEDGQWEEIHVITGALKLFLRELPEPLFPYSFFDKFIAAIKIQDYPQKVLY
FRDLVRSLPLPNHDTMHLLFKHLLKVIEFGEKNRMSVQSVAIVFGPTLLRPQTESANITV
YMVYQNQIVELILKEFETVFAPS
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttggtgtgcaacatggggctggtgctggtagagtttgagtacgagtacacg
ggccgcgatgggggcctggtgtccatcaagcccaacgaacgatacatcctgctggccaag
accaacgaccactggtggcacgtgaggaagaacgagcaagcaaggcccttctatatacct
gctaaatacgtcaaggagctccccgcagagatcccatccccgctggactttgctgaccca
cccagtcccgatttggtcccggttcctgggccggtgccagtgccagtcccaaagcactcc
gtaccagaccgggcagaaacgagggcaggagatgaggtgactatccgtctccgctccccg
aagagacatcagaagactgagcaccggatgtccacatttggcgtacccttagaattccac
gacccgtctcccagggcgttgaagagcggcgagctgaccgactctctgccgggccttcac
tccaccgttgcccttgaggtccccttaacagtgccctcgcctcaagccaacaatagtgcc
aaacacaagaagcaattaaacctgagttccggtgtgctctttggctcttccctgtcggtg
gaggagcctctctccctgaacccccgagcccccagcttcagcccagctgaccccctccaa
cggccctcccaggccatcccagtggagaggtccctcatccctgatgccgaggtcaccggt
ggcgggattccccatcaggaacctctgaacgagccggaatgtcctctggagctggaggag
ggagaaaatgagaaatctagtgtggagcctgaggacgaatcgaaggaggacactgagaat
atttatgaatccatattggacctgaagctggatgagtcccctataatagtggagaaggcc
ccgacagtgagtcctgctgctgtggctgaacctacacctgttatcactcccacttctcca
acacagacacaggcggagaatgccagccccaacactgctgtttacgccaacgtcacagag
ctgaagaaaaacatcccacaatcccctccgttagaagctctgagtcctgacttgcccctt
acccaggagggatggcaggtgcacactgacaaggacagcgggaaagagttctattacctc
ccagccacgggccaaaccacttgggccgacccccgcagcaccctcccctccacagacatg
gagctgcccaaggaggcgttggctatcccagccctgtccatggccctgtccccggccctg
tccccggccctgtccccggccctctcaccagccctgtccccggccctgtccccggccctg
tccccggccctttccccgggcctgtccccggccctgtccccagccctggccctgtccccg
gccctgtccccagccctggccctctcaccagcctcatcccagggttccaactgggaacag
gggtttgatgagaccaccggtcgaaactacttctataacctcacctctggggccacctcc
tggggagctccggagcccatcgccccctcctctcctgttactgagcctcccgtgctgaag
ctcccaaacagaggaccgccccctctcccaaaggaagactacctgacagaagaccacgaa
gctccagacacctcctcctcggtgttccccaaagacatcctgcccatgccgcaggctaaa
ctggctgtcataccccgggccattctagacagtgtcccggcgggctggaagcgctccttg
gaggcagatgggaagaccgtattcaccagcgaacgcacacaggagcagtggctcaagtct
gtggatcaagaaggaaagacgtactactacctgagagacggctccagatcccagtggaac
cttccagcagagctcccaggtgcagccagtctgtccaaggtggggaatggagtggaccag
gacagcccgctggttctgaagaactggagacacacaatgggcccagctcagtttggcccc
tcccaagaagacaacaggttctttccaacacataggagaaacgtttcggacgtcaccagt
gaagcatccagctcaggcaactcccctgagacgccacgccatactgataggttgggagta
cggagtagactgtcacatctgagcacagactcacatcatgagcatacacatctactggag
aaggcaggtatcctgaacaaaaccaaggtggccgacaatgggaaaagaattaggaagaat
tggagtccgtcatggacagtgctgcatggaggcattctcacgtttcacaaagacccaaaa
tctgcaccctcgggaaactctaacaagaccaatcagatcaccccagagtacacagtggag
ctgcgtggagccactgtgggctgggcccccaaggacaagtccagcaagaagaacgttctg
gagttgaaaacgcgtcatgggtgtgagtacctggtccagtacgacacagagagcatcatt
tgtgactggcacaggatcatactggacaccgtcagacagctggacgaagatcacttgtcg
gaagaggaagaggaggagcctatggagaaatctccacttgcttcagacagagacaagagg
accagctcagccactaaaattacgcctggcatcagtgccgagtcatcagatcaggggcgt
gtccgcaccaaactacgcaagttactccagaagaggcccacactgcagtcagtgaaggag
aagggctacataagagataatgtgtttggttgtcatctggacacgctgtgccatcgagag
aacagcactgtgcccaggtttgcagagaagtgcatcagggcagtggagattagaggtctg
gacattgatgggatctacagagttaatgggaatctagctgtcattcagagactacgccac
aaagcagatcatgaggaaaatctggacctagaggatggtcagtgggaggagattcatgtg
atcacgggggcgctaaagctcttcctgagggagctgcctgaacctctcttcccttacagc
ttcttcgacaagtttatcgctgccatcaaaatccaggactatcctcagaaggtgttgtac
ttccgtgacctggtgaggtcccttcccctgcccaaccacgacaccatgcacctccttttc
aaacacctcctcaaagtgattgagtttggggaaaagaaccgtatgtcagtccagagtgtg
gccatcgtgtttggccctacgttactcaggccccagactgaatcggccaacatcaccgtt
tacatggtctaccagaaccagattgtggagctcatcctcaaagagtttgagacagtattt
gcccccagctga
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