Oncorhynchus nerka (sockeye salmon): 115110576
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Entry
115110576 CDS
T07952
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit-like
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115110576
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
one01007
]
115110576
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115110576
Enzymes [BR:
one01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
115110576
Amino acid related enzymes [BR:
one01007
]
Aminoacyl-tRNA synthetase
Class II (U)
115110576
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115110576
Prokaryotic type
115110576
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
MarR_2
HTH_11
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
115110576
NCBI-ProteinID:
XP_029492206
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All DBs
Position
LG26:complement(19560541..19570332)
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AA seq
497 aa
AA seq
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MADTGLVETLLRRVEKVDGGLDSQDVATSLGVDHQAIVGAVKSLLALGDVISAEQRSSKH
WELTGEGCEIAEQGSHEARVVSSIPEEGMPQSQLMKLAFGKVGFSKAMSNKWIRLDKGHE
GGPRIFKTVEHLEDLVRDKLLLVQKGQASQLQEKEKNELKKRKLLSEVTVKSYWITKGSC
FSTTITKQETELTPEMIASGSWKEKKFKPYNFEALGVAPDCGHLHPLMKVRTQFRQIFLE
MGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPAQAHEFPQDYLERVRKVH
SEGGFGSQGYKYDWKIEEAQKNILRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGDLMGILHQFFNKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKKWVEVGNSGMFRPEMLLPMGLPEGVTVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPVCRLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctgacactggtcttgtagaaacgcttcttcggcgggtggaaaaggtggacggtggt
ctcgacagtcaagatgttgcgaccagtctcggggtggaccaccaagctatcgtcggtgct
gtgaagagcctactggcacttggtgatgtgatctcagctgagcagcgctcctcgaagcac
tgggagctgactggggaaggctgtgagatagccgaacagggcagccatgaggcccgagtc
gtcagctccatcccagaggaagggatgcctcagagccagctcatgaaactagcctttggg
aaggtgggtttcagcaaggccatgtccaacaagtggatccgtctggacaagggccacgag
ggcggacccaggatcttcaagactgtggagcacttagaagacttggtgagggacaagttg
ctcctggtacagaaaggccaggcgtctcaactgcaggagaaggagaagaatgagctgaag
aaacgcaaactgctctctgaagtgacggtcaagtcctattggatcacaaagggcagctgt
ttcagcaccaccatcactaagcaggagacagagctcacccctgagatgatcgctagtggg
agctggaaggagaagaagttcaagccttataactttgaggctttgggtgtggccccagac
tgtggccacctgcatccgctcatgaaggtccgcacgcagttcagacagatcttcctggag
atgggcttcactgagatgcccaccaacaacttcattgagagctccttctggaactttgac
tccctgtttcagccccagcagcacccagccagggaccaacacgacaccttcttcctgtct
gacccagctcaggcccatgagtttccccaggactacctggagagagtgaggaaggtccat
tcagagggaggctttggatcacaggggtacaagtatgactggaagattgaggaggctcag
aagaacatcctccgtactcacaccacagcagtcagcgctcgcatgctgtacaaactcgct
cagcaggaaaagttcacccctgtcaagtacttttctatcgacagagtattccgtaatgaa
actctggatgccacccacttggcagagtttcaccagattgagggagtggtggctgactat
ggccttaccctgggtgacctcatgggcatccttcatcagtttttcaataaactaggaatc
accaaattacgctttaaaccggcctacaatccatacaccgagccgagcatggaagtgttc
agctatcatgaagggctgaagaagtgggtggaggtgggaaactctgggatgttcaggcca
gagatgctgctgcctatggggctccctgagggggtgacggtcatcgcctgggggctgtct
ctggagaggcccaccatgatcaagtatggcatcaacaacattcgtgagctggtgggacac
aaggtcaacctgcagatggtctacgacagccctgtgtgtcgactggactcttag
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