Oncorhynchus nerka (sockeye salmon): 115110599
Help
Entry
115110599 CDS
T07952
Name
(RefSeq) intraflagellar transport protein 56-like isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115110599
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115110599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC3
TPR_19
TPR_16
TPR_2
TPR_14
TPR_6
DUF5575
Motif
Other DBs
NCBI-GeneID:
115110599
NCBI-ProteinID:
XP_029492255
LinkDB
All DBs
Position
LG26:19980795..19988355
Genome browser
AA seq
582 aa
AA seq
DB search
MILSRVKPAAVGGEIPVNKKTKEKKPPLVEDFLIQRDYLGAITLLEFQRNVGERGEDADL
WLAYCAFHLGDYKRAMEEYKALTDKPDCRPDVWVYLACTLFFLGLYKEAEEASRKAPKCQ
LQNRVLFHLAHKFNDEKQLMGFHQELEDVTEDQLSLASIHYMRSHYQEAIDIYKRILLQN
REKITETGEEASDCLCRDFLALNVYVALCYYKLDYYDVSQEVLAVYLQSVPDSTIALNLK
ACNHFRLYNGKAAETELENLIDISSSSFEFAKELIRHNLVVFRSGEGALQVLPALIDVIT
EARLNLVIYYLRQDDVQESYQLIKDLEPTTPQVQGSVSLNVHQRTEYILKGVVNAALGQE
MGSTDHLKIAQQFFQLVGGSASECDTIPGRQCMASCFFLLRQFEDVLIYLNSVKSYFYND
DAFNFNYAQAKAAVGNYREAEEIFLLIQNDKNKSDYVYLSWLARCYIMNQKARLAWELYM
KMETSAESFSLLQLIANDCYKMGQFYYSAKAFDILERLDPNPEYWEGKRGACVGIFQLIL
ASREPREALREVLPLLRNTGNPQVEYIIRILKKWAKDNRVSL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgattctgtccagagtaaagccagcagctgttggtggggagatcccagtaaataagaag
acaaaagaaaaaaagccaccgcttgtggaggacttcctaattcaaagagactatctgggg
gccattacattgttggagtttcagcgcaatgttggcgagcgaggggaggatgcagacctg
tggttggcctactgtgctttccaccttggtgactacaagagagccatggaggaatacaag
gccctgacagacaaaccagactgccgcccggatgtgtgggtctacctggcctgtactctc
ttcttcctggggctttacaaagaagcagaggaggcttcacgcaaggcccctaaatgccag
ctgcagaatcgagtactgttccatttggctcacaagttcaatgatgagaagcagctgatg
ggtttccaccaggagttggaggatgtgacagaggaccagctcagcctggcctccatccac
tacatgcgctcccactaccaggaggccatcgacatctacaaacgcatcctgctgcagaac
agagagaagataacggagactggagaggaggctagtgactgcttatgcagagacttcctg
gccctgaatgtgtatgtggctctgtgctactacaagctggactactacgatgtgtcccag
gaggtgctggctgtttacctgcagagcgtcccagactccaccatcgctctcaacctcaag
gcctgcaaccacttcaggctctacaacggaaaagcagcagagactgagctggaaaacctg
atagatatctcctccagctcctttgagtttgccaaggagttaatccgacacaacctggtg
gtgtttcgtagtggggagggggccctgcaagtgctgcctgcactgattgatgtcattact
gaggctcgtctcaatctggtcatctactacctcagacaagatgatgtccaggagtcctac
cagctcatcaaagacttagaacccaccacaccacaggttcagggcagtgttagtcttaat
gtacatcagcgtacagagtacatcttgaagggggttgtgaatgctgcactcggacaggag
atggggtcgacagatcatctgaagattgctcagcagtttttccagctggttggtggctca
gctagcgaatgtgacaccatccctggcagacagtgcatggcttcttgtttctttctgctc
aggcagtttgaagatgtgctcatctacctcaattctgtcaagagttacttctacaatgat
gacgccttcaacttcaactatgcacaggccaaagctgctgttggcaactacagggaggca
gaagagatcttcctgttgattcaaaatgacaagaacaagagtgactatgtgtacctgagc
tggctggcacgctgctacattatgaaccagaaggcccgtctggcctgggagctctacatg
aagatggagacctcagcagagtccttcagcctcctgcagctcattgccaacgattgctac
aagatgggccagttctactactcagcaaaggcatttgatatcttggagagattggacccc
aaccctgagtactgggagggcaaaaggggagcctgtgtgggtatctttcagctaattttg
gcaagcagagaacccagggaggctttgagggaagtgctgcccttgctgaggaacactggg
aatcctcaggtggaatacatcatcaggattctgaagaaatgggccaaggacaacagggtt
tctctgtga
DBGET
integrated database retrieval system
