Oncorhynchus nerka (sockeye salmon): 115110638
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Entry
115110638 CDS
T07952
Name
(RefSeq) netrin-1-like
KO
K06843
netrin 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
one00536
]
115110638
Glycosaminoglycan binding proteins [BR:
one00536
]
Heparan sulfate / Heparin
Axon guidance molecules
115110638
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Thioredoxin_8
Motif
Other DBs
NCBI-GeneID:
115110638
NCBI-ProteinID:
XP_029492320
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Position
LG26:20731221..20771277
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AA seq
600 aa
AA seq
DB search
MIKISEVWVTSVAISLVVKGALGGYGMSMFAAQSSPPDPCYDENGNPRRCIPDFVNSAFG
KDVRVSSTCGTPASRYCVVTEKGEERTRDCHTCDAGDPKKTHPPAYLTDLNNPHNLTCWQ
SENYVQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQLYSTQC
KKMYNKQNKAAITKQNEQEAICTDSHTDMHPLTGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASKCVKDREGN
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSG
RRSGGVCLNCRHNTAGRHCHYCKEGFFRDMSKAISHRRACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVASPTSTYTSSEEPLDCDSHCKASKG
KLKINMKKYCKKDYAVQVHVLKGDKAGEWWKFTVNIISVYKQGEQRIRRGDQLLWVRAKD
VACKCPKIKLGRKYLLLGTDDDSPGQSGVVADKGSLLIPWKDLWGRRLRKFQQRDKRGKC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgataaagatttcagaggtttgggtcacctcggtggccatttctctggtggttaagggg
gctcttggaggttatgggatgagtatgtttgctgcccagtcgtcccctccagacccatgc
tatgatgagaacggcaacccccggaggtgcatccccgatttcgtgaactctgctttcggg
aaggacgtgcgcgtctccagcacctgtggaaccccggcctcaaggtactgcgtcgtgacc
gagaagggtgaggagaggactagggattgccacacctgcgatgcaggggacccaaagaag
actcatccacccgcgtatttaactgatctcaacaaccctcataacctcacctgctggcag
tcagaaaactatgtccagtatcctcagaacgtcacgctcactttgtctttgggtaaaaaa
tttgaggtcacctatgtgagcttgcagttctgttcaccccgacccgaatctatggctatc
ttcaagtcaatggactatggcaaatcctgggttcctttccaattatactctacccagtgt
aagaagatgtataacaagcagaataaggcggcaattaccaagcagaacgaacaagaggcg
atttgcacagactctcacacggacatgcacccgctgacaggtgggctcattgcgttcagc
accttggatggcagaccttcggcgcacgacttcgacaactctccggtgctgcaggactgg
gtgacagccaccgacatcaaggtggcgttcagccgactgcacacgtttggggatgagaac
gaggacgactcggagctggctagagattcctacttttacgcagtatcagacctgcaggtt
ggcgggcggtgcaagtgcaacggccacgcttcaaagtgcgtaaaagatagggaaggaaac
ctagtatgcgagtgcaagcacaacaccgcggggccggagtgtgacaggtgcaaacctttc
cattatgaccgtccttggcagcgcgcaaccgcaagagaggcaaacgaatgtgttgcctgc
cactgtaacctgcacgcccggcgctgtcgtttcaacatggagctgtacaagctgtctggg
cggaggagcggcggagtctgtctcaactgccgccacaacaccgccggacgccactgccac
tactgtaaggagggcttcttccgggacatgtccaaggccatctcccacaggagggcctgc
aaagcgtgtgattgtcatccagttggcgcagccggcaagacctgcaaccaaaccactggc
cagtgtccctgcaaggacggtgtgaccggcatcacctgcaaccgctgtgccaagggctac
cagcagagccgctctcctatcgccccctgcataaagattccagttgcatcgcccacctcc
acctataccagctctgaagagcccttagattgtgattctcactgcaaggcatccaagggc
aagctgaagatcaacatgaagaagtactgcaagaaagactatgctgtccaagtgcacgtc
ctcaaaggagacaaggcaggggagtggtggaagtttaccgtgaacatcatctctgtctac
aagcaaggtgaacaacgcatccggcgcggtgaccagctcctatgggtgcgtgccaaggac
gtggcctgcaagtgccccaagatcaagcttggcaggaagtacctgctgctgggcacggat
gacgactcccccgggcagagtggcgtggtggcggacaagggcagcctgctcatcccctgg
aaggacctgtggggccggagactgaggaagttccaacagcgcgacaagaggggcaagtgt
taa
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