Oncorhynchus nerka (sockeye salmon): 115110660
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Entry
115110660 CDS
T07952
Symbol
rbm44
Name
(RefSeq) RNA-binding protein 44 isoform X1
KO
K25080
RNA-binding protein 44
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115110660 (rbm44)
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
RRM domain-containing proteins
115110660 (rbm44)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
wHTH_TTC3
RRM_1
zf-tcix
Zn_Ribbon_1
TTC3_9th
DZR
Zn_ribbon_3
DUF7577
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
115110660
NCBI-ProteinID:
XP_029492349
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All DBs
Position
LG3:42735202..42746202
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AA seq
1163 aa
AA seq
DB search
MWYPFPMLMPLSLSPEPQRPSDISQTPYASGMIRMHMVPCDQRFFQNAMNGLADPPSLSI
EDCRKFLLNRSVFDLVKVTHFLELTDPKLLGWYLSLPVEDRKLIQEEGGLHRFLQRHPAL
NVARQLVYVKQQVRGCWKPPAVTQTMSSNLNKSRRPTFYGVIQCPNCGTSCSSGAKICRR
CSTPIHKEIPACHSEEEKELGLLPNNVKEELNLFNCSGHGGVQSVQAHHQAEAGAVQQFR
GCQPQSFTTTTFPSTTVGCLVNLQDSFQSACGDTSGSHIGATEDSPGQQEVHFSKVELLS
QLWEEGRWQDGNNCSSVAIYKDPSAQTSFSLDMELEIQSQRGKTLSQSAIKSQEGESMAK
SMSMHDHMADFPMLDRETPPEYYSFNSTRMDRTEWNDTSINTSQLVEPDRDDSLSLMATM
RSTEQPSGAVEVEPPEGSMVSSCAGDRSEYCDWTYDNCPGNLANEEEASRCEIENNGVDY
RSLMKEDGSILMYKASNEGTPDLNVTPPQGQTKMDQSGWSRESLSAPQTLKKEELSIYEE
SFLSISPGGASADVVTTTQHENGMSAFSLVNLNQTFDLSPSRVTEARLSTADHSTNTWPA
VAKHVLVGIDHSLTGCNQNTQTQGTATTDKSVITEVHMADLEYLTEEFIKLKFSQEELKE
LKEQMASSTGGVSVRDGRGCDNADRGECDCGQRATRAELNLLALQYAMCQRHCWRRYYTS
PEGDRLVQGTEGPPESLVTVLQLLEVDYREMRRRVLSGIPLDQLRPLSVDSQRITSGTSY
VPQHIIDESLGNALSDASGRISQQLQVEDARVDDASAGGDGELNRPSLSQSVLSVLGQDD
GMVGRIKAEVPVGNPKAEDCRSVKAVIHLPQQPVVNRRPRPGGTKDHNSSEAWFDAEEDL
EPDGVELKEGGLAEVLVEEGNGKNRVEGEKPHDRHTPKDFSFTGVVGEKDQSSFLCVTDL
PSDVTEREVMLWFEKYQASEVSISTFSNNLRVAIVTVSGPKMADSAVSEMDGCSMHGQTV
HVAHICSPSHTGNQSQGQGRQTQQQHSPSASTKAGPSGDTPCPQDSKRRNTHITTPLMPL
QLSLQKRTTVCDSPTASGTCVPQHYATMGSFDTLMAHLSLRHPEAGRQRIVDALLDLRAK
HQGFLSGLPLKTIVNMTSDLLTR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtggtatcccttcccaatgctcatgccgttgtctctgtcgccggagccacagcgtcca
tcagatatttctcaaacgccctatgcatcagggatgattcggatgcatatggtaccttgt
gaccaacgtttctttcaaaatgcaatgaacgggttggctgaccctccgtctttgtcgata
gaggactgcaggaaattccttctcaacaggtctgtgtttgacctggtgaaagtcacccat
ttcctggagctgacagaccccaagctgctgggttggtacttatcgctgcctgtggaggat
aggaagctcatacaagaggaaggaggactccatcggtttctgcagaggcatccggctctg
aacgtagccagacaactggtttatgtgaaacaacaggtgagaggttgctggaaacctcct
gctgttacgcagacgatgtcgtcaaacctaaacaaatccagaaggcccacattctatggt
gtgattcagtgtcccaactgtggaaccagttgttcttcaggagctaaaatatgccgacgc
tgtagcacacctatccataaggagatcccggcatgccattcagaagaggagaaagagtta
ggtcttcttcccaacaatgtgaaggaggagcttaatctgttcaactgttcagggcacgga
ggagtccagtcagtccaagcccaccaccaggcggaagcaggagcagtgcaacagttcagg
ggatgtcagcctcagtcctttactactactaccttcccatccacaacagtgggatgtctg
gtcaaccttcaggatagcttccagtcagcctgtggtgataccagtggcagccatattgga
gccacagaggattctccaggccaacaggaggtgcacttctccaaggtcgagctgctctct
cagctgtgggaggaagggcggtggcaggatggcaacaactgcagtagtgtggcgatatat
aaggatccgtctgcccagactagcttctctctggatatggagctggagatacaaagccag
agaggaaaaaccctgagccagtctgccatcaaaagccaggagggtgaatcgatggccaaa
tccatgtccatgcatgaccacatggcagacttccccatgttggaccgggagactcctcca
gagtactacagcttcaacagcactaggatggaccgcacagagtggaacgacaccagcatc
aacaccagccagttagtggagccggaccgcgacgactcactatcactcatggccaccatg
aggagcactgagcagcctagcggcgcagtggaggtggagccacctgaaggcagtatggtg
tcttcctgcgctggagaccgcagcgagtactgtgattggacttacgacaactgccccggc
aacctagcaaatgaggaagaggcctcaagatgcgagatagagaataacggtgtcgactac
cggagcctcatgaaagaggatgggagtattctcatgtataaagcaagtaatgaggggaca
cctgacttaaacgtgacaccccctcaaggccaaaccaagatggaccagtctggttggtct
agagagagtctcagtgcaccccaaaccctgaagaaagaggagttgtccatctatgaggag
tccttcttgtcaataagccctggtggggcatcggcggacgtcgtgaccaccacacagcat
gagaacggtatgtctgcgttctcgctagtcaatctgaaccagacttttgatctctcgcct
tcacgggtcacagaagccaggctaagcacagccgaccattcaacaaatacttggcctgcc
gtcgctaaacatgtgttggttggtattgaccacagtctaacaggctgcaaccagaacaca
caaactcagggcacagctacaactgacaagtctgtcatcactgaagtccacatggcagac
ctggagtatctgactgaggaattcatcaagctgaaattttctcaagaggaactgaaagag
ctgaaagagcaaatggcaagctctacaggcggtgtgagtgtgagagatggaagaggctgc
gacaacgcggaccgtggggaatgtgactgtggccagcgtgccacgcgggcagagctgaac
ctgctggccctgcagtatgcgatgtgccaacggcattgctggagacgctactacacctca
cctgagggagaccgtctggtccaggggactgagggccctcctgagagcctggtgacagtg
ctgcagctcctggaggtagactacagagagatgaggagacgggtcctgtcaggtataccc
ctggaccagctcaggcccctgtctgtcgactcccagaggatcacctcagggaccagctat
gtcccccaacatataattgacgagtctttgggaaatgctctgtctgatgcctcaggtagg
atctcccagcagttgcaggtagaggatgcccgtgtcgacgacgccagtgcaggtggtgat
ggagagttaaacagacccagtctgtcccagtctgttttatcagtccttggacaggatgat
gggatggttggcaggatcaaggcagaagtgcccgttggtaacccaaaggctgaggactgc
agatctgtgaaagcggtcatccacctcccccagcagcctgtggtcaaccggaggcccagg
ccaggtggaaccaaagaccacaactccagcgaggcgtggttcgatgcagaggaggacctt
gagcctgatggtgtagagctgaaggaaggaggtctggctgaggtcctggtggaggaagga
aatggcaagaatagggttgagggggaaaagccgcatgacagacatacccctaaagatttt
tcgttcacgggagtcgttggggagaaggatcagagctccttcctgtgcgtcacagacctt
cccagtgatgtaacggagagagaagttatgctctggtttgagaagtatcaggcttctgaa
gtgagcatttccaccttcagcaacaacctccgagttgctatagtgactgtgagtggtcca
aagatggctgacagtgcagtgagtgagatggacgggtgcagtatgcatggacagacagtg
catgtggcgcacatctgcagcccaagccacactggtaaccagagccagggtcaggggcgg
caaacccagcagcagcatagtccctcagccagcaccaaggcagggccctctggagacact
ccatgcccccaagactccaagaggagaaacacccatatcaccaccccactgatgcccctg
cagctcagcctccagaagaggaccaccgtgtgtgactcccccacggcgtcggggacctgt
gtgccccagcactacgccaccatgggtagcttcgatacactgatggcccatttgtcattg
cgccacccagaggcagggaggcaaaggattgtagatgccctgctggacctgagggccaaa
caccaggggttcctcagtggcctgcctctcaagaccattgtaaacatgacctctgacctg
ctgacacgataa
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integrated database retrieval system
