Oncorhynchus nerka (sockeye salmon): 115110664
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Entry
115110664 CDS
T07952
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115110664 (recql5)
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115110664 (recql5)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
115110664 (recql5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SRI
Helicase_C
RecQ5
RecQ_Zn_bind
TFIIS_M
ResIII
KIX_2
Motif
Other DBs
NCBI-GeneID:
115110664
NCBI-ProteinID:
XP_029492352
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All DBs
Position
LG26:complement(21703554..21718356)
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AA seq
1048 aa
AA seq
DB search
MTSIKKALKTHFGFDKFRSQKQEDVVKAVVKGDRDVFVCMPTGAGKSLCYQLPAVLAKGI
TLVISPLIALIQDQVDHLRDLNIPACSINSKLPAGERRLILADLESESPMLKLLYITPEM
VASSAFQPCLTGLLSRSLLSYLAVDEAHCVSQWGHDFRPDYLKLGSLRARLPGIPCVALT
ATAPQKVQEDIAKSLRLRSPLSFATPVFRSNLHYEVVYRELLEDPYKHLHAFIREALTLG
EGPKGQGCGIVYCRTRDGCETVAHQLTKLGVLAKPYHAGLKAGDRTEAQTDWMQGKVLVI
VATISFGMGVDKSNVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRTYYSPKDREQLNF
LIRKEVARKQAKRGSEKDQDKAAITDFEAMVSFCEQEGCRHATISKFFGDQKPDCAGACD
YCRDPKAVRAQLEKGATLCTKTGAAWSTQPRGPFGFDRDLYAGGRKGYGFERHDEEGWES
GGDDDGSEHRRKEFGDLFKKQMNLRKVSEGHKDSFIPPDDNCPLREASSQKIPRLTVKAR
EHCVALLQEALNNHQVAAADTHRSETLSLAVDIEHEVFKITKSSNLYKAAVLKRVSEMKK
GGAASAGGGGREGTSGSGESTEIKTESKDEAASSSSSLTEEQQGFTPASQIYSLKRKRIG
AGLRGSSNPFQTASELLRASNCEGSTTGPGANSGTGSGGPDCLAGSGESAGEEERGKRKE
TNTGDTAPTISSSIRAKANAVSAFLNSPTKTGGKALSKKQMLAEAAKNSRNITQYFGKKP
IEKSQEVEIRTNDVSSQAFSIPPQSLPTQEITPGTVSMDTIPMDTSPMEIFPMETIPIET
IPMDTIPTEINNLDNNDDEEVKEEAKLDLDSITVQNAHESKAKSLLKLRLCVDSEESEAL
PSAKRSCPLQDSRKKVTFNPKVQETVLEPGSPSNAPKPVSLKEVADIVVRCLDPFYTQGK
FATKELFKSFARYLSHLLAEGRSRGRGQVKMQARNLIKKFFSSVKRCESEADWKHLKGPH
STETSEHRGMGGGGTMNRKVEEDNNLGV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgacttccattaaaaaggcgttaaaaacccattttgggttcgataagttccgatcccag
aagcaggaggacgttgttaaagcagttgttaaaggtgaccgggatgtttttgtgtgcatg
cccaccggggcagggaagtccctctgctaccagcttcccgcagtgttggctaagggtatt
accttggtcatatcccctcttatcgctctcattcaggaccaagtggaccacctaagggac
ctgaacattcctgcatgctccatcaactccaagctccctgcaggggagcgccgtctgatc
ctggccgatctggagagtgagagccccatgttgaagctgctttacatcaccccagagatg
gtggcctcctctgccttccagccctgccttacaggcctactctcccggagcctcctctcc
tacctggctgtggacgaggctcactgtgtctcccagtgggggcatgacttcagaccagac
tacctcaaactgggcagtctgcgtgcccgtcttcccgggataccctgcgtggcgctgacg
gccacggcaccccagaaggtgcaggaggacatagcaaagtccctgaggctgcgatcaccg
ctgtcctttgccacacctgtgtttcgcagtaacctgcattatgaggtggtgtacagggag
ctactagaggacccctacaagcacctacatgccttcatcagggaggccctgaccctgggg
gaaggccccaaaggacagggttgtggaattgtgtattgtcggaccagagatggctgtgag
acggtggctcaccaactgactaagctgggagtcctggccaagccttaccatgcagggttg
aaggcaggagatcgcacagaggctcagactgattggatgcagggtaaggtgcttgtcatt
gtggccaccatcagctttggcatgggggtggacaaatctaatgtcaggtttgtggcccat
tggaaccttgccaagtcactagccagttactaccaggaatctgggcgtgcggggcgagac
ggcctgccctcttcctgcaggacgtactactcccccaaggacagggagcagttgaacttc
ctcatccgcaaggaggtggcccgcaaacaggcaaagcgtggctccgagaaagatcaggac
aaggctgccatcacagacttcgaggccatggtgtcattctgtgagcaagagggctgccgc
catgccaccatctccaagttctttggggaccagaagccagactgtgcgggggcctgtgac
tactgtcgtgaccccaaggctgtgcgggcccagctggagaagggggccactttgtgcacc
aagactggagcagcttggagcacacagcccaggggcccgtttgggtttgaccgtgacctc
tacgccggggggaggaagggctacggctttgagaggcatgatgaggagggctgggagagt
ggtggtgatgatgatggctccgagcatcggaggaaggagtttggagatctcttcaagaaa
caaatgaacctgcgcaaggtgtctgagggacacaaagattcatttatccccccagatgat
aactgcccactcagggaggccagcagccagaaaatccccaggctcactgtcaaggcccgg
gagcactgtgtggccctgttacaggaggctctgaacaaccaccaggtggcagcagcagac
acacacagatctgaaacactctccttggcagtggatattgaacatgaggtcttcaagatc
accaagtcttccaacctgtacaaagcagctgtcctgaagagagtatcagagatgaagaag
ggaggggctgcctctgcaggaggaggaggaagagaagggaccagcggctctggggaatcc
acagagataaagactgaatccaaagacgaagcagcctcctcctcttcctccttgactgag
gagcagcagggcttcacgcctgcctcacagatctactcactaaagcggaagagaatagga
gcaggtctgaggggctcctccaaccccttccagactgccagtgagctgctgagggcctct
aactgcgagggctccactacaggtccaggggccaacagtgggacagggagcgggggccct
gactgcctggctgggtctggagagtcagccggtgaggaggagagggggaagaggaaggag
acaaatactggagatacagcaccaaccatcagctcctccatcagagctaaagccaatgca
gtctctgccttcctgaacagtcccaccaagacaggaggcaaggccctgagcaagaagcag
atgctagcagaggctgctaagaactcccgcaacattacccagtactttgggaagaaaccg
attgaaaagagtcaagaggtggagataagaaccaatgatgtgtcatctcaggccttttca
ataccaccccagtcactccccactcaggaaatcacacctggtactgtctccatggatacc
atccctatggacactagtcccatggaaatcttccccatggaaaccatccccattgaaact
atccctatggacaccatccccacagaaatcaacaacttggataataatgatgatgaggag
gttaaagaggaagctaaactggacttggactctatcacagtgcaaaatgcacatgaaagc
aaggctaaatcgttgctaaaactaaggctatgtgtggacagtgaagagagtgaggccctc
ccctcagccaagcgcagctgccccctacaggacagcaggaagaaggtgacttttaacccc
aaagtccaggagactgtactggagccagggagcccaagcaacgcccccaagcctgtgtct
ctgaaggaggtggctgacatcgtggtgcgctgtctagaccctttctatacgcagggcaag
tttgccaccaaggagctgttcaagtcatttgcccgctacttgtctcatctactagcagag
gggaggagtaggggaagaggtcaagtgaaaatgcaggccaggaatctgataaagaagttc
ttcagcagtgtgaagcgctgtgagagtgaagcagactggaagcacctgaagggaccacac
agcactgagacctctgaacacagagggatgggaggaggcgggactatgaacagaaaggtg
gaggaggataacaacctgggggtctga
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