Oncorhynchus nerka (sockeye salmon): 115110669
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Entry
115110669 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: xylosyltransferase 2-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
one00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
one01100
Metabolic pathways
Module
one_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115110669
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
115110669
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115110669
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
115110669
Glycosyltransferases [BR:
one01003
]
O-Glycan biosynthesis
Glycosaminoglycan
115110669
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
115110669
NCBI-ProteinID:
XP_029492358
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All DBs
Position
LG26:21750450..21767515
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AA seq
884 aa
AA seq
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MNTRIGKMVASVRVQKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGEAERKTRRSKLP
DHNSQDPKREAVAWERQNVLSGRSGARWNSRLERTGATAASALRRGTKRRGKHTIRVKVP
LGQGVAVDGVPPHDPSSSRNFTDTRGGGEGVARLPPPVMPGEPGSVEGAPQAPSSDFVPK
CDIMGKDALSALHRAGSRQCRQEIANIVCQHQAGQLMPRALPQFCPLHGFSSPVQTADEL
DNDLAKVENPVRVAFVLVVHGRAIRQLKRLIKAIYHRDHFYYIHVDKRSNYLHREVQQIA
QQYPNVRATPWRMVTIWGGASLLKAYLHSMQDLLSMLDWNWDFFINLSATDFPTRTNDEL
VAFLSQHRDQNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERTIPEGLEVSGGSDW
FSLTRRFVEYVINSQDELVAGLKQFYTYALLPAESFFHTVLGNSPMCDSLVDNNLRVTNW
NRKLGCKCQYKHIVDWCGALPNDLKPQDLVRIQQLTRPTFFARKFESTVNQEAIHILDTH
LYGHYAPGTVAIKAYWESLFELVDGVGSLSDVALTAYSSFFRLGLRSLESSQTSLETCRY
EPIGYPVSVHLYFYDERFQGYLVRQEVQKVGSRVRETVEVWAVPQATMQLENNLREFERL
KNLEVGTEWDPKERIFRNFGGVIGPLDEPVAVQKWVRGPNLTATIVWIDPAQTVAASYDI
SVDVDAEYTQYKPPLQRPLRPGAWTVRVLRLWERVAEARFLVMPLAFKGREPLRQEEDSW
LHAGPPGNLYLEQGFQQLRSVLKLPPQEPALQEAQQRAQLVGKPLEAWVDRTVGAFWVTG
DLCSTLPSPGPCPSLGPCTKSTWSSLAPDPKSELGPVKGDGRIR
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaacactagaattggaaaaatggtggccagcgtcagagtgcagaagctcctccgacga
tacaaactagcgattgccgccgcgttaacgattcttctgattcaagggctagtagtatgg
agtctgagaagtctcgaagagggcgaggcggagaggaaaacgcggcggtctaagctacct
gaccacaacagccaggaccccaaaagggaggcggtggcctgggagagacagaacgtcttg
tctgggaggagcggggcccgatggaacagcagactggagaggacgggggccacggctgcc
agcgccctccggaggggcaccaagcgccgggggaagcacaccatcagggtgaaggtgccc
ctgggccaaggggtagcagttgatggcgttcccccccatgacccctccagcagccgtaac
ttcactgatacccggggtggaggggagggggtggccagactaccccctccagtcatgcca
ggggaaccgggcagcgtggagggggcgccccaagcccccagcagcgactttgtgcccaag
tgtgacatcatgggcaaggacgccctgtcggccctgcaccgcgcaggctcgcggcagtgc
cggcaggagatcgccaacattgtgtgccagcatcaggccgggcagctcatgccaagggca
ctgcctcagttctgcccgctgcacggtttttccagcccggtccagacagctgatgagctg
gacaatgacctggccaaggtggagaacccggtcagggtggccttcgtcctggtggtccac
ggccgggccatcaggcagctcaaacgcctcatcaaagccatataccaccgagaccacttc
tactacatccacgtggacaagcgttccaactacctgcatcgggaggtgcagcagattgcc
cagcagtaccccaatgtgcgtgccacgccctggcgcatggtgaccatctggggtggtgcc
agcctgctgaaggcctacctgcacagcatgcaggacctgctctccatgctggactggaat
tgggacttcttcatcaacctcagtgccactgacttccccaccaggaccaacgatgaactg
gtggcttttctgtcacagcacagagaccagaacttcctcaagtcacatgggcgggagaac
gcgaggttcataaagaagcagggtctggaccggctgttccatgagtgtgacaaccacatg
tggcggctgggtgagcggaccatcccagagggcctggaggtgtctgggggctctgactgg
ttctccctcaccaggcgcttcgtagagtatgtcatcaactcccaggatgagctggtggcg
ggcctgaaacagttctacacctacgccctgctccccgctgagtccttcttccacacagtg
ctgggaaacagtcccatgtgtgactctctggtggacaacaacctgcgtgttaccaactgg
aacaggaagttgggctgtaagtgccagtacaaacacatagtggactggtgcggcgctctc
cccaacgaccttaaaccacaggaccttgtcaggatacagcaactgacccggcccacgttc
tttgcccgaaagtttgagtccacggtgaaccaagaggctatacacatcctggacacccac
ctgtatggacactacgccccagggacagtggccatcaaggcctactgggagagcctgttt
gagctggtggacggggtgggctccctcagtgacgtggccctcacggcctactcttccttc
ttccgcctgggcctcaggagcctggagagcagccagaccagcctggagacctgcaggtat
gagccaataggctacccggtgtcggtgcacctgtatttctacgacgagcgtttccagggc
tacttggtccgtcaggaggtgcagaaggtggggtcaagggtcagggaaacggtggaggtg
tgggccgtgcctcaggccaccatgcagctggagaacaacctccgggagtttgagaggctc
aagaacctggaggtgggcacagagtgggaccccaaggagagaatattccggaacttcggt
ggtgtgatcgggccgctggacgagccggtggcggtacagaagtgggttcgggggcccaac
ctcactgccaccattgtgtggatcgaccccgcccagacggtggcggcgtcttatgacatc
agtgtggatgtggacgcagagtacacacagtacaagcccccgctgcagcggccgctccgc
cccggggcctggacagtcagggtgctgaggctgtgggagcgtgtggctgaggctcgcttc
ctcgtcatgcccctggccttcaaaggacgagagccactacgccaagaggaggacagctgg
ctgcacgcggggccaccaggcaacctgtacctggagcagggcttccagcagctgagatct
gttctgaagctgcccccacaggagcccgccctgcaggaggcccagcagagggcccagctg
gtgggcaagcccctggaagcctgggtggaccgcacagtgggggccttctgggtgaccggg
gacctgtgctccactctgccctccccgggcccctgcccttcccttggcccctgtaccaag
tccacctggagctccctcgccccagaccctaagtcagaacttggccctgtcaaaggtgac
ggccggatcaggtag
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