Oncorhynchus nerka (sockeye salmon): 115110671
Help
Entry
115110671 CDS
T07952
Name
(RefSeq) xylosyltransferase 2-like isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
one00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
one01100
Metabolic pathways
Module
one_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115110671
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
115110671
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115110671
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
115110671
Glycosyltransferases [BR:
one01003
]
O-Glycan biosynthesis
Glycosaminoglycan
115110671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
115110671
NCBI-ProteinID:
XP_029492361
LinkDB
All DBs
Position
LG26:22421577..22433638
Genome browser
AA seq
877 aa
AA seq
DB search
MVASVRVQKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGEAERKTRRSKLPDHNSQDP
KREAVAWERQNALSGRSGARWNSRLERTGATAASALQRGTKRRGKHTIRVKMPLGQGVAV
DGVPPHDPSSSRNFTDTRGGGEGAARLPPPAMPGEPGSVEGAPQAPSSDFVPKCDIMGKD
ALSALHRAGSRQCRQEIANIVCQHQAEQLMPRALPQFCPLHGFSSPVQTADELDNDLSKV
ENPVRVAFVLVVHGRAIRQLKRLIKAIYHRDHFYYIHVDKRSDYLHREVQQIAQQYPNVR
ATPWRMVTIWGGASLLKAYLRSMQDLLSMLDWNWDFFINLSATDFPTRTNDELVAFLSQH
RDQNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERTIPEGLEVSGGSDWFSLTRRF
VEYVINSQDELVVGLKQFYTYALLPAESFFHTVLGNSHMCDSLVDNNLRVTNWNRKLGCK
CQYKHIVDWCGCSPNDFKPQDLVRIQQLTRPTFFARKFESTVNQEAIDILDTHLYGHYAP
GTVAIKAYWESLFERADGVGSLSDVALTAYSSFFRLGLKSLDSSQTSLETCRYEPIGYPV
SVHLYFYDERFQGYLVRQEVQKVGSRVRETVEVWAVPQATMQLENNLREFERLKNLEVGT
EWDPKERIFRNFGGVIGPLDEPVAVQKWVRGPNLTATIVWIDPAQTVAASYDISVDVDAE
YTQYKPPLQRPLRPGAWTVRVLRLWERVAEARFLVMPLAFKGREPLRQEEDSWLHAGPPG
NLYLEQGFQQLRSVLKLPPQEPALQEAQQRAHLVGKPLEAWVDRTVGAFWVTGDLCSTLP
SPGPCPSLGPCTKSTWSSLAPDPKSELGPVKGDGRIR
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcgtcagagtgcagaagctcctccgacgatacaaactagcgattgccgcc
gcgttaacgattcttctgattcaagggctagtagtatggagtctgagaagtctcgaagag
ggcgaggcggagaggaaaacgcggcggtccaagctacctgaccacaacagccaggacccc
aaaagggaggcagtggcctgggagagacagaacgcattgtctgggaggagcggggcccga
tggaacagcaggctggagaggacgggggccacggctgccagcgccctccagaggggcacc
aagcgccgggggaagcacaccatcagggtgaagatgcccctgggccagggtgtagcagtt
gatggcgttcccccccatgacccctccagcagccgtaacttcactgatacccggggcgga
ggggagggggcggccagactaccccctccagccatgccaggggaaccgggcagcgtggag
ggggcgccccaagcccccagcagcgactttgtgcccaagtgtgacatcatgggcaaggac
gccctgtcggccctgcaccgcgcaggctcgcggcagtgccggcaggagatcgccaacatt
gtgtgccagcatcaggccgagcagctcatgccaagggcactgcctcagttctgcccgctg
cacggtttttccagcccggtccagacagctgatgagctggacaatgacctgtccaaggtg
gagaacccggtcagggtggccttcgtcctggtggtccacggccgggccatcaggcagctc
aaacgcctcatcaaagccatataccaccgagaccacttctactacatccacgtggacaag
cgttccgactacctgcatcgggaggtgcagcagatcgcccagcagtaccccaatgtgcgt
gccacgccctggcgcatggtgaccatctggggcggtgccagcctgctgaaggcctacctg
cgcagcatgcaggacctgctctccatgctggactggaattgggacttcttcatcaacctc
agtgccactgacttccccaccaggaccaacgatgaactggtggcttttctgtcacagcac
agagaccagaacttcctcaagtcacatgggcgggagaacgcgaggttcataaagaagcag
ggtctggaccggctgttccatgagtgtgacaaccacatgtggcggctgggtgagcggacc
atcccagagggcctggaggtgtctgggggctctgactggttctccctaaccaggcgcttc
gtagagtatgtcatcaactcccaggatgagctggtggtgggcctgaaacagttctacacc
tacgccctgctccccgctgagtccttcttccacacagtactggggaacagtcacatgtgt
gactctctggtggacaacaacctgcgtgttaccaactggaacaggaagctgggctgtaag
tgccagtacaaacacatagtggactggtgcggctgctctcccaacgacttcaaaccacag
gacctcgtcaggatacagcaactgacccggcccacgttctttgcccgaaagtttgagtcc
acggtgaaccaagaggccatagacatcctggacacccacctgtatggacactacgcccca
gggacagtggccatcaaggcctattgggagagcctgtttgagcgggcggacggggttggc
tccctcagtgacgtggccctcacagcctactcttccttcttccgcctgggcctcaagagc
ctggatagcagccagaccagcctggagacctgcaggtatgagccaataggctacccggtg
tcggtgcacctctatttctacgacgagcgtttccagggctacttggtccgtcaggaggtg
cagaaggtggggtctagggtcagggaaacggtggaggtgtgggccgtgcctcaggccacc
atgcagctggagaacaacctcagggagtttgagaggctcaagaacctggaggtgggcaca
gagtgggaccccaaggagagaatcttccggaacttcggcggtgtgatcgggccgctggac
gagccggtggcggtacagaagtgggttcgggggcccaacctcactgccaccattgtgtgg
atcgaccccgcccagacggtggcggcgtcttatgacatcagtgtggatgtggacgcagag
tacacacagtacaagcccccactgcagcggccgctccgccccggggcctggacagtcagg
gtgctgaggctgtgggagcgcgtggccgaggctcgcttcctcgtcatgcccctggccttc
aaaggacgagaaccactacgccaagaggaggacagctggctgcacgcggggccaccaggc
aacctgtacctggagcagggcttccagcagctgagatctgttctgaagctgcccccacag
gagcccgccctgcaagaggcccagcagagggcccacctggtgggcaaacccctggaagcc
tgggtggaccgcaccgtgggggccttctgggtgaccggggacctgtgctccaccctgcct
tccccgggcccctgcccttccctgggcccctgtaccaagtccacctggagctccctcgcc
ccagaccctaagtcagaacttggccctgtcaaaggtgatggccggatcaggtag
DBGET
integrated database retrieval system
