KEGG   Oncorhynchus nerka (sockeye salmon): 115110693
Entry
115110693         CDS       T07952                                 
Name
(RefSeq) telomere-associated protein RIF1-like isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:one03032]
    115110693
DNA replication proteins [BR:one03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    115110693
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 115110693
NCBI-ProteinID: XP_029492411
LinkDB
Position
LG3:42867270..42892950
AA seq 2558 aa
MMAMVPPTSSGLLPLLESLEDSTAGQPEQTEAYLTIANRLSGDDGTQFLPAVVKHFPRLG
KTFQTHISSQNAELSQAALQALGFCVFHVHVVSAISANFAEEILSALSSLVVKSTDKNTC
TRALWVISKQNFPTEVVAKKVPEILRALECVRTREDIQSVVMEHESLNVVISLLEQASAQ
MGEDAVQWAKLVIPLVVHSASKVRLRAAAALEMGLPLLLEKQKEVAAILEPLMSSKLIPE
LQKLFSTKNETNVLKLWPLFVRLLGKLLHRGGPFINSLLGLEELGFRSSSPNIKKIAFIA
WKSLIDNFALNPEILCSAKRLKLLLQPLRSIQVRTEALLLTKLEVWWYLVVKLGANLPAH
FEQVGVPLLQCTLGLDSALPATPSRSSSQCSAVGTTTPKSGSPAFSGTMVPRLNLNTSVV
VAQAYPSIQLLGLEMLLHYFLGSEVTTAAAKNKLALSLEPISHPFLSSPFSFTKHAPLLI
TAVHDSFICIGKDAPDALLSLIWKNLVSFVSTTIDAAGNKKERQGSEVLTLLLQALQGII
SSEALPANRALSLLELTVKGIPQRVLGSASYQVGKMDVLNGTPALFLILLFYNHSLVAGF
VEDERFFLCLETLVSCGLSGPTSPLAFGEAVLAVVGRSAGTLENKEQLWRMWSLVVNPLT
DTITQTNEVNQGDALEHNFTAVLTALMFPIIHLLPGKVLPQMTQKSMLGTWCRLYKVFAR
CSALVATAEENVCCEELCVKMAAILDRKALKVPATLHAVANILLVIAESADFSPYTSQFQ
QKMKSPHTHLTWVRKKSKALGNLYTFQTLLVQSLETFNALEAPETAPNGTGLALVSILSI
LFSNLSLGTAIQEALASLSHPLVALYEQAGRTPNEQRKCTSSLGAQLEKLLSDVLGCLQI
RSALAYDDELLSLLSPLLCVLFLHRRKQVRSLATQFWNATFANTLVLVYPEELKPVLSQV
KQNTPIILPGFQSVEVPDELSGQYSSESSQLETKLSGVQVTSGVKRDSLLPRAEEIKDRN
SKTSTKPVPTKLDFGSHKLPRREELEEQASIDFVFIPPETKERVLTEHQKEVKRTKRVDI
PAMYNNLDASLDTTVFTQYTQSQEESLDKLPADEQPEDAAKDEVKAEGNVERDEASEVLA
KDTQEYISPTNEMAEPAMEEEPPEEVLPESADVSMEDANEDVPLEDSDVAMESREEGTSP
IVSGGSDIISGTPKKHNSRRQSFITLEKYAEGKPASPASVVKFTGPLTRTLNSQEQEPAS
QKPSAEIEADTDRQDSQETEQVRHKSSRSESFLKEGEEHESSENKKESEVEIIAEKQSSE
TTEDDVIPDTQTQVEVLKEVPVPAVEEVMGNNSQEEEESKGLLEDSTSSQSTLSQGEPRR
SGRRRSRPLRPGEDTEERDDLDKQRKKSQPGEDVSQTDSPKTTPSLASPNDSQSQGRASR
RSKLAVEEDGGKDKLRKRSHKEVSELSQSNSQLATPSPAGDSNSLSQGWRSNKLVRESKE
LVKDKRKRRGVAKEELSQRDSLTVTDNDSQSQSRRSQRSKLAVEVEDDGNQKRKGGRAQK
EKPSQTDSHVAKPSQLESQSQGGTSRSKAVSDSEEFDLPDKVEKQDPTEEEQSQRDSQMA
TLSPAAQTGDEQSQGISSGGSKLVTQSEEQGKDKQRRVGTENTLSQIDSKITTPSATPKD
SQSQGRASRKSKVPLEVAELEDKTSPNVATDSAAAPEMSQTDSQVTPSATRQTDSQPRLR
GRSSKRSKLEEQLKASSSPMPTPIETHSSQVADQAGTQESPRGSRRTTRRRASQGLLSSN
VESDTSETREDAQKPKKRGRNPKSTVDLQSPLATVGSGEPGAYLEIPMDLSESSLKSESE
KSDLQNPLSEALEVKIPQDVDETIKSINSLKPVMDVLKLPLITKNNIGEDNTEMVDIEGE
CENTKLPSQLIDSSFKSDLEQLKSQHFCISPRKNLKTVSSQEGVHSDFGCEGPTQLQNKL
LTDSEQANSPVPSADGNSFSGYESVLLEPNKLCTPPISNGLPTDTSPSEAAEEKLSLSLQ
VAESSGEKLVDVPKPVTVSSEEVTEEQMGEDKENRHPESTNNVLEEDQPEEDVFMSIVHT
QPEGFNALDQEEQYTCIKEGQPESDNTSTRTRENDTEPQANDVQDFTPLQERAKMDTVPS
LECEEEDGEETRLDNNDLALHPLDSVAPLTFDTREAPVPLHHPSTSKDVLCQDSPPKQKG
LEAMMGLEVGQSPSSGRIRGMWTPSASPSTSILKKGQKRPIEEESSSPFTKSRRVSFADP
IQHQELADDIDRRSPIIRSNSPRAKTASSSITQPKYITTPTKGLMILSPRNLCSPGYKSS
KKCLISEMSQEPRPIPKDCVYPALVSCSTPVEAVLPQITSNMWPRGFGHLVRARNIKTVG
DLSALTPSEIKNLPIRSPKISNVKTALKTYHEQQRKGRSDELKSFEEMENMTSELEEPTL
PQNQEEEDKTPGEALATEMLDEPVSMEQGPEERPDHQRPEGDLLLEVESLGARLAGEELS
RCSPDQLVQLHDQLGRMMKNVVVQLQGRLLSQNEDSGP
NT seq 7677 nt   +upstreamnt  +downstreamnt
atgatggcgatggtgcctcctaccagctcaggtctccttcctctgctggaatctctggag
gatagcacagctggacaaccggagcagactgaagcctacctcactattgccaatcgtctc
agtggagatgatggaacgcaattcctccctgcagtagtaaagcactttccacgtttgggt
aaaactttccagacccatatctccagtcagaatgcagagttgagccaagctgccctgcag
gccctggggttctgtgtgtttcatgtccacgttgtctctgctatctcagctaattttgca
gaggagatattgtcagcactttcctctctggtggtgaagtccacagacaagaacacatgc
acacgagcattatgggtcatttccaaacagaacttccctacagaggtggtggccaagaag
gttccagagatcctgagggccctggagtgtgtgcggacgagagaagacatccagtctgta
gttatggagcacgagtctctgaatgttgtcataagtttgttggagcaggcctcggcccag
atgggtgaggatgcagtacagtgggccaagctggtcatccccctggtggtccactctgcc
tctaaggtgcgcctgcgggcggcagcagccctggagatgggcctgcctctacttctggag
aaacagaaggaggtggccgccatcctagaacctctcatgtcctcaaaactcatcccagag
ctccagaaactgttctccacgaagaacgagaccaacgtgctaaaactctggccgttgttt
gtcagactcctggggaagctgctccatagaggtggtcccttcatcaactccctgcttggc
ctggaggaactgggcttccgtagctcctccccaaacatcaagaagatcgccttcatcgct
tggaagagcctgattgacaatttcgcgctcaacccagagatcctgtgcagtgccaagcgt
ctaaagttgctgctccagcccctccgctccatccaggtgaggactgaggccctgctgctc
accaagctggaggtctggtggtacctggtggtcaaactgggagccaacctgcccgcacac
tttgaacaggttggtgttcctctcctccagtgcaccctgggcctggactcggccctgcca
gccactccttccaggagctccagccagtgcagtgctgtggggaccactactcctaaatct
ggttccccagcgttctctggcactatggtgccccgtctgaacctaaacaccagtgtggtg
gtggcccaagcctacccctccatccagctgctgggactagagatgttgttgcactacttc
ctggggtcagaagtcacaaccgccgcagccaagaacaagctggcgctcagcctggaacct
atttctcaccccttcctgtccagccccttctccttcaccaagcacgcccctctgctgatc
actgctgtgcacgacagcttcatctgcatcggcaaagacgccccagatgccttgctttcc
cttatatggaagaaccttgtcagtttcgtaagcacaacgattgatgctgcaggcaataag
aaggaaaggcaaggctctgaggtgctgaccttgctgctacaggctctacagggcatcatc
tcctcagaggccctccctgcaaacagggctctgagtctgctggaattgacagtgaagggt
atccctcagagagtactgggatctgcctcttaccaagtgggcaaaatggatgtactgaat
ggaaccccagctctgttcttgattctcctgttctacaaccacagtctggtggcaggcttc
gtagaggatgagaggttcttcttgtgtttggagacactggtgagctgtggcctgtccggc
cccacgtcccccctggcgtttggggaggcggtcctggcggtggttgggcgcagcgcgggg
actctggagaacaaagaacagctttggaggatgtggagcctggtggtcaacccgctgact
gacaccatcacacagaccaatgaggtgaaccaaggggatgctctggagcacaacttcact
gctgtgctcactgccctgatgttccccatcatacacctgctacctggcaaggttctgcca
cagatgactcagaagtccatgctgggtacgtggtgcaggctgtataaggtgtttgcccgc
tgctctgccctggtggccaccgccgaggagaacgtctgctgtgaggagctgtgtgtcaag
atggctgccatattggacagaaaggctctgaaggttccagcaacgttgcatgcggttgct
aacatcctcctggtcatcgctgagagtgcagacttctctccctacacatcacagttccag
cagaagatgaaatctccccacacccatctaacctgggtgcgtaagaaaagcaaggcgctg
gggaacctgtataccttccagaccctgctggttcaatcccttgagaccttcaatgcactg
gaggcccctgagacggcccctaatggtacaggcctagccctggtctccatcctctctatc
ttgttctctaatctgtctctgggtacagccatccaggaggccctggcctctctctcacat
cccctcgtagccctctatgaacaggctgggaggactccaaatgagcagcgcaaatgtacc
tcaagtcttggagcacagctggagaagctcctgagtgatgtcttggggtgcctgcagatc
cgttcagccctggcctatgatgatgagctgctctccctgctgtcccccttgctctgtgtc
ctgttcctccatcggcgcaagcaggtccgctccttagctacacagttctggaatgcaacc
ttcgccaacactctggtcctcgtctatccagaggaactcaagccggtgttgagccaggtg
aagcagaacactcctatcattctacctggatttcagtctgttgaagttccagatgaactc
agtggacagtactcgagtgagagctctcagctggagaccaaactgagtggagtacaggtc
acttctggggtgaagagggactctctactgcccagggctgaggagataaaggacaggaac
tccaagacctctaccaagcccgtccctacaaaacttgactttggttctcacaagctgcct
cgtagagaggaactggaggagcaggcctcgatagactttgtgttcatcccccctgagacc
aaggagagagttctcactgagcaccagaaagaggtcaagagaaccaaaagggttgacatc
cctgccatgtacaacaacctggatgcttcccttgataccacagtcttcacccagtacaca
cagagtcaggaggaatcactggacaaattaccagcagatgagcaacccgaagatgccgct
aaagatgaggtcaaagcagagggtaacgtggaacgggatgaagcttctgaggttttggca
aaagacacccaggaatatatcagtccaaccaatgagatggcagaaccggcaatggaagag
gagcctcctgaggaagtacttcctgagtctgcagacgtttccatggaggatgccaacgaa
gatgttccattggaggactccgatgttgccatggagtctagagaagagggcaccagtcca
attgtttctggtggctctgatatcatctcagggacacctaagaaacacaacagtcgccgc
cagtccttcatcactctggagaagtatgctgaggggaagcctgctagtcctgccagtgtg
gtgaagtttacaggccccctcaccaggaccttgaacagccaggagcaggagcctgcctct
cagaaaccatcggcagagattgaggctgacacagaccgacaggactcccaggagactgaa
caagtaagacacaaaagctccaggagtgagtctttcctaaaggagggagaggaacacgaa
tcttcagaaaacaaaaaggaatctgaagttgagataatcgctgagaaacagtcaagtgaa
accacagaggacgatgtcatcccagacactcagactcaggtggaagtactgaaggaagtt
ccagttcctgcagttgaagaagtaatgggaaacaacagtcaggaagaagaggaatctaaa
ggtcttttggaagattctaccagctcccagtccactctgagccaaggtgaaccaaggcgg
tccggacggcggaggagcaggccgctgagaccaggagaggacacagaggaacgagatgat
ctagacaaacagaggaagaagtctcaacctggagaggatgtgagtcaaactgattcacca
aagactactccctctcttgccagtccaaatgatagtcagtcacaaggtagagccagtagg
agaagtaagctggctgttgaggaggatggtggaaaagacaagctgagaaagagaagtcac
aaggaagtgagtgagttgagtcaatcaaattcacagcttgccacaccttcacctgctggt
gatagcaacagcctatcacagggttggaggagcaacaaattggtcagggaatcaaaggag
ctggtaaaagacaaacggaagaggagaggtgttgcaaaggaagagctcagtcaaagggac
tccctaacggtcactgataatgatagccaatcacagagtagacgtagtcagaggagtaag
ctggctgtggaagtagaggatgatggcaatcagaaacgaaagggtggtagggctcagaag
gagaagccaagtcaaacagattcacatgtagccaaaccatctcaactagagagtcagtcc
cagggtggaacaagcaggagcaaggccgtcagtgattcggaggagtttgatctcccagac
aaggttgaaaagcaggatcctactgaggaggagcaaagccaacgtgattctcagatggcc
acactatctcctgctgcccaaacaggagatgaacaatcacagggtatatcaagcgggggg
agtaaattggtcacacagtccgaagaacagggtaaagacaaacagagaagagttggcacg
gaaaacacactcagtcaaattgactcaaagatcaccacaccttcagccactccaaaagat
agccagtcacagggtagagcaagcaggaaaagcaaggtgccccttgaagtggctgagttg
gaggacaaaacaagtccaaatgtggccactgattcagcagcagcacccgagatgagccag
actgattctcaggtcactccttccgccaccagacaaacagacagccagccgaggctcaga
ggaagatccagtaagagaagcaagttagaggaacagttgaaggccagcagcagccctatg
ccaacccccatagagacgcatagctcccaggtggcagaccaggctggaacacaggaatcc
ccccgaggaagcagaaggactacgagacggagagcttctcagggcttactgtcctccaac
gtggagtcagacacttcagagacccgggaggatgcccagaaacccaagaagagaggcagg
aatcccaaatccacagtagatcttcaaagcccacttgctactgttggatcaggagagcca
ggggcttacctagagatcccaatggatctttctgaatcttctctaaagtctgaatctgaa
aagtcagacttgcaaaacccattgagtgaggccttagaagttaagattcctcaggatgtg
gatgaaaccattaaaagtatcaactcccttaaacctgttatggatgttctgaaacttcct
ctgataacaaagaacaatataggggaggataacactgagatggtagatatagagggtgag
tgtgagaataccaagctgccttctcaattgatcgactcttcattcaaatctgatctagaa
caacttaagagtcagcatttttgcatatccccacggaagaacctcaaaacagtctcttct
caggagggtgtccatagtgactttgggtgtgaagggccaacacagctccaaaataagctc
ctcactgactctgagcaggccaactctccagtgccttccgctgatggaaattcattctcg
ggatatgaaagtgtattacttgaaccaaacaaactatgcacccctcccatctccaatggt
ctccccacagatacttcacccagcgaagctgcagaggagaaactgagcctgagtcttcag
gttgctgagtcttcaggggagaagcttgtagatgtgccgaagcctgtgactgtgtccagt
gaggaggtgacagaggagcagatgggagaagacaaggagaaccgacatccagagtctact
aacaatgttctagaggaggaccaaccagaagaggatgttttcatgtctattgtgcatacc
caaccagagggtttcaatgccttagatcaggaggagcagtacacatgtattaaagaaggc
cagccagaatctgacaacacctctactaggaccagagaaaatgacacagagcctcaggca
aacgacgttcaagatttcactcctctccaagagagggcaaaaatggatacggttccaagt
cttgagtgtgaagaagaggacggtgaagaaactcggctagacaataatgacctagctcta
catcctctagactctgttgcccctctgaccttcgacactcgcgaagcaccagtgcctcta
catcatccaagtacttctaaagacgtgttgtgccaagattcgcctcccaagcagaagggt
ttggaggctatgatgggtttggaggtgggccagagccccagcagtggcaggatcagggga
atgtggaccccctcagcctccccctccacctctatactgaagaagggacagaaaagacca
atagaagaggagagttcttcacctttcactaagtctcgacgagtatcatttgccgaccca
atccaacaccaggagctggcagatgacattgaccgtcgcagccctatcatccgatccaac
tccccaagagccaaaactgccagcagtagcatcactcagcctaagtatatcacaacacca
acaaagggcctaatgatccttagtccacgcaatctctgcagcccagggtacaagagctcc
aagaaatgcctgatctcagagatgagccaggagccgaggcccatccctaaggactgtgtg
tacccggccctggtcagctgttctacgccagtggaggcggtactgcctcagatcacctcc
aacatgtggcctcgtggttttggtcatcttgtgcgtgcccgtaatatcaaaacggttgga
gacctcagtgctctcacacccagcgaaatcaagaaccttcccattcgctccccaaagatc
tctaatgtgaagacagcacttaaaacataccacgaacagcagcggaagggccgtagtgat
gagttgaagagttttgaagagatggagaacatgacatcagagctggaggagccaaccctt
cctcagaaccaggaagaggaggacaagactcctggagaggccctcgccacagagatgttg
gatgagccagtgtccatggagcagggtccagaggagaggcctgaccaccagaggcctgag
ggggatcttctgttggaggtggagtccctgggagctcgtctagctggggaggaactgagc
cgctgctcccctgaccagcttgttcagctccatgatcagctgggaaggatgatgaagaat
gtagtggtgcagctgcagggcagactactttctcagaacgaggacagcggaccctga

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