KEGG   Oncorhynchus nerka (sockeye salmon): 115110718
Entry
115110718         CDS       T07952                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115110718
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115110718
Spliceosome [BR:one03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115110718
 Complex B
    115110718
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer Zip Dsh_C
Other DBs
NCBI-GeneID: 115110718
NCBI-ProteinID: XP_029492442
LinkDB
Position
LG26:complement(23992725..24000339)
AA seq 473 aa
MIVYSYQKLGLCSILSLPTDIEREKESRKKRSGSGSQSRSEKHRSWSKDRGNRSREKRSR
SRDRKSREQRSTSRDHKKHSYSPRRTRRKRTCRYWDVPPPGFEHITPLQYKAMQAAGQIP
TIALLASSAMSGLAVTPTQVPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAG
LSQAPSIPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPG
ISEQPAFHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATS
LSKGYAFCEYVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTAIIETPVTLQVP
GLQGLQNSGLPTGVLCLLNMVMPEELVEDEDYEEILEDISEECCKYGSVRSIEIPRPVEG
VEVPGCGKIFVEYVSTADCQKAMQALTGRKFANRVVVTKYYDPDMYHRQEFSG
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgatcgtatatagctaccaaaagcttggcttatgttccatcctttctcttcccaccgac
atagagagagagaaggagagccgcaagaagaggagcggcagtgggtctcagagccgcagt
gagaaacatcgcagctggagcaaagaccggggcaaccggagccgagagaagcgaagccgc
agtagagacaggaagagccgggagcagaggagcacctcgcgggatcacaagaagcacagc
tattctccacgaagaacaaggaggaaacgaacctgcagatactgggatgtgcctccccct
ggctttgaacacatcacaccattgcagtacaaagctatgcaagcggctgggcagataccc
acaatagccctgctggcatcatctgccatgagtgggttggcagtaacacccacccaagtg
cccatagttggcagtcagatgactaggcaggctcgacgtctctatgttggcaatattccc
tttggagtaacagaggagtccatggcagaattcttcaatgcccaaatgaggcttgcaggc
ctatcacaagcccctagcatccctgtgcttgctgtgcagataaatcaggataaaaacttt
gcattcctagagttccggtctgtcgatgagaccacacaggccatggctttcgatggaatc
attttccaaggtcagtcgttgaagataagacgaccacatgactaccggcccctacctggc
atttcagagcagcctgcttttcatgtcccaggtgtcgtgtccacagtggtaccagactcc
ccacataaactgtttattggaggcctacccaactatctcaatgatgatcaggtgaaggag
ctcttgacatcattcggaccactcaaagctttcaaccttgtcaaggacagtgccacgtca
ctttccaaaggttatgccttttgtgaatatgttgacatcagtgcgactgatcaggcggtg
gctgggctcaatggcatgcaactgggtgacaaaaagctcatcgtccagagagcaagtgtg
ggagccaaaaacgccaatccgactgccatcatcgagaccccggtgacgctgcaggtgcct
gggctgcagggacttcagaactctgggctgcccacgggggtgctgtgcctgctcaacatg
gtgatgcctgaggagctggtggaagacgaggactacgaggagatcctggaggacatcagt
gaggagtgctgcaagtacggcagcgtgcgctccatcgagattccccggcctgtcgaagga
gtggaggtccctggctgtggcaagatctttgtggagtatgtttctactgcagactgtcag
aaagccatgcaggccctcactggccgcaagtttgccaacagagtggtggtaaccaaatac
tatgatccagacatgtatcacagacaggagttctcagggtag

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