Oncorhynchus nerka (sockeye salmon): 115110789
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Entry
115110789 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: glial fibrillary acidic protein-like
KO
K05640
glial fibrillary acidic protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115110789
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115110789
Membrane trafficking [BR:
one04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
115110789
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
115110789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Myosin_tail_1
DUF1664
TPR_MLP1_2
GAS
DUF7491
TolA_bind_tri
KLRAQ
DUF4515
CENP-F_leu_zip
Fib_alpha
BLOC1_2
T2SSF
VPS11_C
Motif
Other DBs
NCBI-GeneID:
115110789
NCBI-ProteinID:
XP_029492549
LinkDB
All DBs
Position
LG26:complement(25334167..25343067)
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AA seq
457 aa
AA seq
DB search
MESQRVLSSYRKRFGPQGAGSVGGGVRLSSLSSSRFSXPWDPRHLTHSSTISRLSLGSAG
GALLLGTPGNRLDFSADSLLKAQYRETRTNEKVEMMGLNDRFASFIEKVRFLEQQNTVLV
TELTQLRGKEPSRLGDIFQEELRELRRQVDGLSAGKARLEIERDNMASDVATLKQRLQDE
MVLRQDAESNLNAFRQDVDEASLNRVQLERRIDALQDEIAFLKKIHEEELRELQEQLMAQ
QVHVDVDVSKPDLTAALRDIRVQYESVASSNIQETEEWYRSKFADLTDAATRNADALRLA
KQEGNEYRRQLQAMTCDVEALRGTNESLEQQLREMEDRFSVETAGYQDTVGHLEEEIQTL
KEGMARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITVPMQSFSNLQFRETSMDTKF
SPEAHVKRSIIVRTVETRDGEIIKESTAERKEIPDSP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcagagagtcctgtcgtcttacaggaagcgtttcgggccccagggggccggc
agcgtgggtgggggcgtgcggctcagcagtctctcctccagccgcttctccnctccatgg
gacccccgccacctgacccactccagcaccatttcccgtctctccctggggtcggctgga
ggggccctgctcctggggacccctgggaaccggctggacttctcggctgactcactcctc
aaggcccagtaccgtgagacgcgcaccaacgagaaggtggagatgatgggtctgaacgac
cgcttcgccagctttatagagaaggtgcgcttcctggagcagcagaacacggtgctggtg
acggagctgacccaactgagggggaaggagcccagccgtctgggggacatcttccaggag
gagctgagggagctgcgcaggcaggtggacggactcagcgctgggaaggcccggctggag
atagagagggacaacatggcatctgacgtggccacactcaaacagagactgcaagatgag
atggttcttagacaggatgcagagagcaacttgaacgcctttagacaggacgtggatgag
gcgtctctgaaccgtgtccagttggagaggaggatagacgcgctgcaggatgagattgcc
ttcctcaagaagatccacgaggaggagctgcgtgagctgcaggagcagctgatggcccag
caggtccatgtggatgtggacgtgtccaagccagacctgaccgctgctctgagggacatt
cgggtccagtatgagtccgtggcctcctcgaacattcaggagacggaggagtggtaccgc
tccaagtttgccgacttgaccgacgcagctactcggaatgcagatgccttgcgattggcc
aaacaggagggcaacgagtaccgccggcaactccaggccatgacctgtgatgtggaggcg
ctccgtggaacaaacgagtctctggagcagcagctgcgtgagatggaggaccgtttctcc
gtggagacggctggttaccaggatacagtgggtcatctggaggaggagatccagactctg
aaggaggggatggccagacacctgcaggagtaccaggacctgctcaacgtcaaactggcc
ctggacatagagatcgctacctacaggaagctgctggagggagaggagagcaggatcact
gttccaatgcagagcttctccaacctgcagttcagagagaccagtatggacactaagttc
tctccagaggcccatgtcaagaggagcatcatagtgcggactgtggagactagagacggg
gagatcattaaggagtctacggctgagaggaaggagattcctgacagtccttaa
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