Oncorhynchus nerka (sockeye salmon): 115110914
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Entry
115110914 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: zinc phosphodiesterase ELAC protein 2-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115110914
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
115110914
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
115110914
Prokaryotic type
115110914
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
115110914
NCBI-ProteinID:
XP_029492687
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Position
LG26:complement(23777961..23789098)
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AA seq
805 aa
AA seq
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MFSMTKVSLPCKSIAWLFVRHTSTSRQQSFACSEHRFPRTIFQFLRTMSTNTTDNQHRGS
KKPRAPKETLRHVKSREQRKRGVDVHGPATVYAQVVGAGSRDNGASLYVFSEFNRYLFNC
GEGTQRLMQEHKLKAARLDNIFLTRMSWENVGGLSGMILTLKDTGVPEVVLSGPPQLEKY
VNAIRVFSGPLEEIKLAVRPYTEKQYTDDTMTVSQIPIFAQLREDGPKCSPNSGRSSPSS
SPQRRELWRPEDSEDTSTDSRKERATSPGGKARATRDPSLVVAFICKLHPKKGNFLVAQA
KNLGLPVGTAAIGPLIAALKDGKSVTYEGREIHPEEVCTPTDPGPAFIVVECPSEEFVRP
ICIDQQLSRYQRGGTEDPAALVVHMSPESVLKTDEYKQWMERFPSTTEHLILNEQVCTVH
NVRSHKIQTQLNLIHPEIFPELQHYTTKETQAALHVPNVRAECLLKFQLRPKIEWQRDAI
PSCDTEEFVKEAAEAPNFLQEVEECKRFRATDAAVLSGRADKYPEVVFLGTGSALPMKIR
NVSGNLVNISATQSVLLDCGEGTFGQLCRHYGDSVDETLAKISTVFISHMHADHHTGLLS
LLFQRERALVSREFPFFSDFKMSPFLEREARSAVPCSSLVIHVCHCVFKGKNATLLIHEA
TLEDGLEDEAVEKRHSTTSQAIGIGMKMNAEFIMLNHFSQRYAKIPLFSEDFNDRVGISF
DHMRIRFGDFRILPRLIPPLKALFAEEIGEMEERRGRRELKQMKGVIAVSNEEQRTPNEG
ETGKGAKREPEEPTQDVGSKRLKTN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtatgactaaagtgtctctaccctgtaaatctattgcatggctattcgtgaga
cacacatctacaagtcgccaacaaagcttcgcatgcagtgaacatcgttttccccggact
attttccagtttctgcggacaatgtctacgaacacaacagacaaccaacaccggggatca
aagaaacccagagcacccaaagaaacattgcgacatgtgaagtctagagaacagaggaaa
cgtggagtggatgtgcatggaccagccactgtctacgcgcaggtcgtcggggcagggagc
cgagataatggcgcatcactttatgtcttctctgagttcaataggtacctcttcaactgt
ggtgagggaacacagaggctgatgcaagagcacaagttaaaagctgctcgcttggacaat
attttcctcactagaatgagctgggagaatgttggtggtctatcagggatgatattgaca
ctgaaagacactggtgtccctgaggttgttctctctggaccaccacaactggagaaatat
gtgaatgccatcagagtattttctggaccactggaagaaatcaagctagctgttcgacct
tacaccgagaaacaatacacagacgacacgatgacagttagtcaaataccaatatttgcc
cagctcagagaggacgggccaaagtgctcccctaactcagggaggagcagcccctccagt
agtccccagaggagggagctgtggaggccggaagactctgaggacaccagcacagacagc
aggaaggagagagcaaccagcccaggtggaaaagcaagagcaacaagggatccgtcttta
gttgtggcattcatttgtaagcttcatcctaagaaggggaacttcttggttgctcaagca
aaaaaccttgggttaccagtaggcactgcagctattggtcctctcattgcagctctgaag
gatgggaaaagtgttacctacgaaggaagagagatccatcctgaggaggtgtgcactccc
actgatccaggaccagccttcattgttgtggagtgtccctctgaggagtttgttcgacca
atctgcatcgatcagcagctgagcagataccaacgtggaggaacagaggaccctgctgcc
ttagtagtccacatgagcccagagtctgtgctgaaaacagatgaatacaagcaatggatg
gaaaggtttccatctaccacggagcacctgatcctgaatgagcaagtttgcactgttcac
aacgtcaggagccacaagattcaaactcagctcaatctgattcatccagagatatttcca
gagctccagcactatacaacaaaggagacccaggctgccctgcatgtccccaatgtcaga
gccgagtgtcttctgaagttccagctcagacccaagattgaatggcaaagagacgccatc
ccctcttgtgacactgaagagtttgtgaaagaggctgcagaggcccctaacttcctccaa
gaagtggaggagtgcaagcggttccgtgcgactgatgctgcagtgctgtctgggcgggca
gacaaatacccagaggtagtctttttaggaactggatcagctcttcctatgaagatcagg
aatgttagtggtaacttggtcaacatcagtgccactcagtcagtgctgctggactgtgga
gagggcacctttggccagctgtgccgacactatggggacagtgtggacgagactcttgca
aagatctcaaccgtcttcatctctcacatgcacgcggaccatcacacaggattgttgagt
ttgctgtttcaaagagagagagccttggtcagtagagagtttccctttttttcagatttt
aagatgagtcctttcctagaaagagaggctagaagtgctgtgccatgcagcagtcttgtg
attcatgtttgtcattgtgttttcaaaggaaagaatgcaactttacttattcatgaagcc
acattggaagatggattggaggacgaggctgtggagaagagacatagtaccacctcccag
gccatcggtattggcatgaagatgaatgctgagttcatcatgctgaaccacttcagccag
cgctatgccaagatccccctcttcagtgaggacttcaacgacagagtgggaatatctttt
gaccacatgaggattcggtttggagactttagaatcctccccagactcatcccgcccctc
aaagccctgtttgccgaggagatcggagagatggaggagaggagggggaggagggagctt
aaacagatgaaaggagtcattgctgtaagcaacgaagagcagaggacacccaatgaaggc
gagacgggcaaaggtgccaaacgagagccagaggaaccaacacaggacgtgggaagtaag
agactcaaaacaaactaa
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