Oncorhynchus nerka (sockeye salmon): 115110918
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Entry
115110918 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 17-like
KO
K19945
TBC1 domain family member 17
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115110918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115110918
Membrane trafficking [BR:
one04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115110918
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
115110918
NCBI-ProteinID:
XP_029492690
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All DBs
Position
LG26:complement(24398156..24405288)
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AA seq
612 aa
AA seq
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MEPKSETSHKLVFEKEGVYLHTNAKRSNQDTTIPGFIRVCLCLQGGEPALEWSALEDEDR
NTAAVFYTKKDGEGGVEDTNFDPGYEPDWAVISTVKRDQSQRAPPCQRDKYWSFSLPLSE
LYSLRRSRFSLGRNFLVFTSRGGHPLPPLHFHRGGTRELLRALQRYIILAPSPVDGRLFL
AYPHDSGALSQSFDELHLFDDGSSDLVSRFIQDPYATTFGGFSKVTNFFRGALRPPDSPF
HSRGPQDHHGPSSADDEPGFELITCGVELGPKPDVTRGQPLDKWEEFLDPEGRVKDPQQI
KELVFRGVKTLRKDVWEVVLLVCYRXIVLEKEREEHRRMKTDEYFRMKVQWKSVSEEQEM
KNSLLRGYRSLIERDVSRTDRHNTFFSGNDNPGLTLLNDVLMTYCMFNFDLGYVQGMSDL
LAPLLFVTQNEVESFWCLTGFMEMVHQNFEESQEAMKHSSFSSALLMKALDPELLDYLDS
QDSGSLCFCFRWLLIWFKREFSFEDILSLWEVLWTRLPCENFHLLMAASILESQRGEFIG
SDHDFNTILKHINELTMKLDLQTVLRGAEANYLQLACCKELPVKVQEVIGLYVPPSPDDE
TSPESESHERRQ
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaagtctgagactagtcacaagctggtgtttgagaaggagggggtttacctt
cacaccaatgccaagaggagcaaccaggacaccacaatcccaggattcatccgtgtttgt
ctatgtttacagggtggggagccagctttggagtggagcgcactagaggacgaggaccgc
aatacggctgctgtattctacactaaaaaggatggagaaggaggggtggaggacaccaac
tttgaccctggctacgagccagactgggcagtcatcagcacagtgaagagagaccagagt
cagagagcacccccctgtcaaagagacaagtactggtcgttctccctgcctctgtcggag
ctgtactctctgcgacggtcccgtttctccctggggcgtaactttctggtttttactagc
aggggtggccaccccctccctcctctgcacttccatagggggggcaccagggagctgttg
agggccctgcagcgttacatcatcctggccccatcacctgtagatggtcgtctcttccta
gcgtatccccatgactctggggctctctctcagtcctttgatgagctgcacctctttgac
gatggaagctccgacctcgtctctaggtttatccaggacccttatgccaccacctttggg
ggattctccaaggtcaccaatttcttcagaggggctctacgaccaccagattcccccttc
cactctcgtggccctcaggaccaccatggcccctcctcagctgatgacgaaccaggcttt
gagctcatcacctgtggggtggagcttggccctaaaccagacgtaaccaggggacagcct
ctcgacaaatgggaggagttcctggatccagaggggcgtgtgaaggacccacagcaaatc
aaagagctggtcttcaggggggtaaagaccttacgaaaggacgtgtgggaagttgtcctg
ctggtgtgctatcgctgaatcgtactggaaaaagagagggaggaacatcggaggatgaaa
acagatgagtatttcagaatgaaggttcagtggaagtcagtcagtgaagagcaggagatg
aagaactccctcctcagaggataccgcagtctgatagaaagggacgtgagtcggacggac
agacacaacaccttcttctctggcaacgacaacccaggcctgactcttctcaatgacgtg
ctgatgacatactgcatgttcaactttgatctgggctatgtccaggggatgagtgacctc
ttggctcctctcctttttgtcactcagaacgaagtggagtccttctggtgtctgacaggt
tttatggagatggtgcaccagaactttgaggagtctcaggaggccatgaagcacagctcc
ttcagctcagccctgctgatgaaggctctggaccctgagctccttgactacctggactcc
caggacagtggctctctgtgcttctgtttccgttggttactgatatggtttaagagagag
ttctccttcgaggacatcctgtccctttgggaggttctttggactcgtctgccctgtgaa
aacttccatctgctgatggccgcttccattctggaatcacagaggggggagttcatcggc
tctgaccacgacttcaacactattttgaagcacatcaatgaactgaccatgaagctggat
ctgcagacagtcctacgaggagcagaagctaactacctacagctggcctgctgcaaagag
ctgccggtgaaggtgcaggaggtcattggtctgtacgttccccccagccctgatgacgag
acaagcccagaatcagagtcacatgagagacggcagtag
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