Oncorhynchus nerka (sockeye salmon): 115111024
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Entry
115111024 CDS
T07952
Name
(RefSeq) sphingomyelin phosphodiesterase 4-like
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00600
Sphingolipid metabolism
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115111024
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
115111024
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Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
115111024
NCBI-ProteinID:
XP_029492771
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Position
LG27:15097511..15105770
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AA seq
714 aa
AA seq
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MSSSDHLKTDWTIKSLPQQCTEMTKDIDDKPVKELCVIFPWMVERVVGSLDGSTVGWSLS
SLQAHSSDYSNVLEFLQPSGPMLKLVYKLQAEDYNFEIQVANLPGVISNRRIFLNKLPSQ
NHQRLSLNAFEYFMFYFATSVITQRDHHSGQQTSISNSVYFALVDAYFKHFLPTEGSPHS
DVKGTLTSHIPRSSRYSETSKGLLKCQCPVNAETTNQSIWRSGTMLQIFLEIWLPHFPLE
THQKLNEVSVITEEHILVVRQLVKHMHALSGKTKLDQSDILPSAHSETYLSEDFKRVVTS
EYVQRLYLLLLHCFKQWPMETSFRAVLETWLSYIQPWRYQKHVYSENKEKWASFIQENIL
MYTRLFSFFLKRFAHVDLVNVDNATMVFRMTKVFAQTSLPELIENGEKLLLHQGPILPST
LMASQVPPTEIAALLKTHINNKKLQMFGVEMRAEVLKLVQRLMQAQQTAKTTLDPPANVS
VGQFLCSWKRLILKTNSESGGGDMIKSDMKTVELLKKTVDHLNQVFNLNTGHLSQMMMNM
GSVEESKQLPDCIHSENGLILTDLGRMQIINGLRRFDIEYQGDPQLQPVRSYENAVLVQL
MFWIATLINNKLEGHMNDLCSQQNLLGRLGQHYLITSTVKVRFPRSTVTQQSQDDYHLRP
RLTLRTFASYRTLLILLLLYSLGSLFSISPLFSTCLILILSFLYGLCMTVYVGK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcggatcatctgaagacagattggacaatcaagtcactcccacagcaatgc
acagagatgacaaaagacattgatgataaacctgtcaaggagctatgtgttatcttcccc
tggatggtggagagggttgttggcagcctggatggcagcactgttggttggagtctttct
tctctgcaagcccacagcagtgactacagcaatgtactggagttcctacaaccaagtggc
ccaatgctgaaacttgtttataaacttcaagctgaagactacaactttgagatccaagtc
gccaatttacctggggtcatttcaaatagacggattttcctcaataaattaccctctcag
aatcatcagagattgtcactcaatgcctttgagtacttcatgttttattttgccacaagt
gtcattacacagagggatcaccactcagggcagcaaacctccatctcaaacagtgtctac
tttgccttggtggatgcatatttcaaacacttcctccctacagaaggatcccctcactca
gatgtcaaaggcaccttgacctcacacattccaaggtcctctaggtatagtgaaacaagc
aaaggcctgttgaaatgccagtgccctgttaacgctgagacaaccaatcagagtatctgg
agatcagggactatgctacagatatttttggagatatggctgccacatttccccttggag
acgcaccagaaacttaatgaggtctctgtcatcacagaggagcacatactggtggtgaga
cagctggtgaagcacatgcatgccctctctggaaaaacaaaactagaccagtctgatatc
ttaccttctgcccactcagaaacctatctctcagaagattttaaaagagtggtcacatca
gaatatgtacagaggttgtaccttctcttgctgcactgcttcaaacagtggcctatggag
acatccttcagagcagtattggagacgtggcttagttacatccagccctggagataccaa
aaacatgtgtacagtgaaaacaaagagaaatgggcctctttcattcaggagaatattctc
atgtacaccaggctattcagcttcttcttgaaaagatttgctcatgtcgacctcgtcaac
gtcgacaatgcaaccatggttttcaggatgacaaaagtatttgcccaaaccagtcttcca
gaattgattgaaaatggagaaaaattgctattgcatcagggtcccatcctcccatccact
ctgatggcatctcaggtgcctcccactgaaatagctgccctgctcaagactcacatcaat
aacaagaaactacaaatgtttggggtagaaatgcgagccgaggtgctgaaactggtccag
agactaatgcaggcccaacagactgcaaaaaccacattggatccgccagccaatgtatca
gttggccagtttctctgttcctggaagaggttgattcttaaaaccaattcagaaagtggg
gggggtgacatgatcaagtctgacatgaagacagtggagctactaaagaaaactgtggac
cacctcaatcaggttttcaacctcaacacaggtcatctatctcagatgatgatgaacatg
gggtcagtggaggaatccaagcagctccctgactgtattcacagtgaaaacgggctgatc
ctgacagaccttggcagaatgcagattatcaatggccttcgcagatttgatattgagtat
caaggggacccacagctgcagcctgtgagaagctatgaaaacgcagtcttggtgcagctt
atgttttggatcgccacactaatcaataacaaacttgaaggacacatgaacgatctgtgc
tcacaacagaacctcctaggaaggctgggacaacactaccttatcacctccactgtaaaa
gtaaggttcccaaggagtacagtgacacagcaaagccaggacgactaccacctgcggcca
cgccttaccctgcgcacatttgcgagttatcgcacattactcattctcctgttactctac
tcgctgggatctctgttttctattagcccactgttcagcacatgcctcatcttaattttg
agctttttgtatggactgtgcatgactgtctacgtgggaaagtaa
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