Oncorhynchus nerka (sockeye salmon): 115111033
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Entry
115111033 CDS
T07952
Name
(RefSeq) leucine-rich repeat LGI family member 3-like
KO
K19999
leucine-rich repeat LGI family member 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115111033
Membrane trafficking [BR:
one04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
115111033
SSDB
Ortholog
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GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRRCT
LRR_1
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
115111033
NCBI-ProteinID:
XP_029492775
LinkDB
All DBs
Position
LG27:16860622..16876556
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AA seq
550 aa
AA seq
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MLDAGSRRVPEWLRLLAGLSLLLCLVGETGAKRVPKIPRCPVTCSCTKDSAFCVDTKAIP
KSFPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTVVADDAFAGLAHLQYLFV
ENNDVQALSKHTFRGLKSLTHLSLSNNNLQFLPRELFKYLDILTDLDLRGNSFRCDCKIK
WLVDWMEKTNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVYETFPFQSVSVESY
EFNNNQFVAFAQPDTGFCTLFVWDHVEMVFRMYHNITARSAVYCKPVVINNTLYMVVAQL
FGGSHIYKWEEDPQRFVKIQDIDTTRVRKPNFVETFQLDDEWYFAVADSSKAGSTSIYRW
NSNGFYSHQSLHPWHRDTHVEFLDVEGKQRLILSSASQPPVVYQWNRSLRQFAFHSQITE
TFDVQMVKHFWVRNVLYLCLTRFIGDSKILRWEGQRYVEIQTLPSRGSMAVYPFTVGPRQ
YLLLGSDFSFSRVYLWDDLTQRFQPFQELNMRAPRAFSLVSVDNKDMLLAASFKGNTLAY
QHLIVDLSAK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgccggatcgagaagggtcccggaatggctgaggctgttggccggcctaagt
ctgcttctctgcctggtgggggagacaggggccaagagggtccccaaaatcccccgttgt
cctgtcacctgctcctgcaccaaagacagtgccttctgtgtggataccaaggctatcccc
aagagctttccccctgggatcatctctctgacaatggtgaatgcagccttcactacaatc
ccagagggagccttctcccacctgcacctgctgcagttccttcttctgaactccaatacc
ttcactgtggtggctgatgatgcctttgcaggtctggcacacctgcagtacctatttgta
gagaacaatgacgtccaagccctgtcaaagcataccttcagagggcttaaatccttgact
cacctttctctgtcaaataataacctgcagttccttccacgagaactcttcaaatatctt
gatattttgacagacttagatctgcggggtaactcattccgctgtgactgtaaaatcaag
tggctggtggactggatggagaagaccaacacctctgtccctgccatctactgtgccagc
ccatttgagttccaaggtcgcagaatccatgatctcaccccacgagacttcaactgtatc
agtgcagactttgccgtttatgagacttttcccttccagtctgtgtcagtggagtcctat
gaattcaacaacaatcagtttgtggccttcgcccagcctgatactgggttctgtacactg
tttgtatgggatcatgtggaaatggtcttccggatgtaccataatataacagctcgctcc
gctgtctactgcaagcctgtggtcataaacaacactctttacatggttgtggctcaactt
tttggaggatcccacatctacaagtgggaagaggacccacagcgatttgtgaagattcag
gacattgacaccacacgtgtgaggaaacccaactttgttgagaccttccagctggatgat
gagtggtactttgccgtggcagacagttccaaggcaggctctacgagcatataccgctgg
aacagcaacggtttctactcccaccaatcccttcatccctggcatcgtgacacccatgtg
gagttcctagatgtggaagggaagcagcgtctcattctctccagtgcctctcagccccca
gtggtttaccagtggaaccgcagcctgcgccagtttgcctttcattcccaaatcactgag
actttcgacgtgcagatggtcaagcatttctgggtgcgcaacgttctctacctttgcctt
acacgcttcattggtgactccaagattctccgatgggaggggcagcgctatgttgagatt
cagaccctgccctcacgtggctccatggctgtgtatccattcactgtgggcccccgccag
tatcttctcctagggagtgatttctccttctctcgagtttacctgtgggatgacctcacc
cagcgcttccagcccttccaggagctcaacatgagagcaccccgggccttcagcttggtg
tctgtggacaacaaagacatgctgctagcagccagctttaaaggcaacaccctagcctac
cagcacctaatagtggatctcagtgccaaatag
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