Oncorhynchus nerka (sockeye salmon): 115111035
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Entry
115111035 CDS
T07952
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00061
Fatty acid biosynthesis
one00071
Fatty acid degradation
one01100
Metabolic pathways
one01212
Fatty acid metabolism
one03320
PPAR signaling pathway
one04146
Peroxisome
one04216
Ferroptosis
one04920
Adipocytokine signaling pathway
Module
one_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115111035
00071 Fatty acid degradation
115111035
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115111035
09143 Cell growth and death
04216 Ferroptosis
115111035
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115111035
03320 PPAR signaling pathway
115111035
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115111035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115111035
Enzymes [BR:
one01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115111035
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115111035
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of breast milk
115111035
Exosomal proteins of breast cancer cells
115111035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115111035
NCBI-ProteinID:
XP_029492778
LinkDB
All DBs
Position
LG27:complement(17293517..17308122)
Genome browser
AA seq
717 aa
AA seq
DB search
MHFQEWLQSLRTSGGVRGPENKDFWSLVPSLPLSSSFSFSSLSLSPSSLLGIGALASFTA
YWLVTRPRPMRPPCDLNAQSIPVQGEPNWRRSALLKDDVLLEFYYDDTRTAYDMFQRGLR
VAGDGPCLGFRKPGEPYQWISYTEVAEQAQVLGSGLLGKGCQPNPEQLVGIFAQNRPEWI
ISELACYTFSMAVVPLYDTLGEEAMVHILNLAEISLVICDKEEKADSLLGNKEKGVTPTL
SCLVLFNPCSDAIVERGKNCGVEILELTQLMELGRQNLKDPAPPQPQDLAVVCFTSGTTG
KPKGAMITHGNIASNSSSVIKILEGSFVIQQEDVSISYLPLAHMFERMIQVSMLCHGARV
GFYQGDISLLMDDIKTLKPTFFPVVPRLLNRIYDKILGSVTSPLRRAVLHYAVRRKQAEL
SSGVVRNNSLWDRLVFNRIQANLGGNLRFILTASAPISPTVLSFLRATLGCLIFEGYGQT
ECTAGCTFSMPGDWSAGHVGAPLPCAMVKLIDIPDMNYYAKNGEGEICIRGHSVFRGYLK
DEEKTTEALDRDGWLHSGDVGQWLPNGTLRIIDRKKHIFKLSQGEYIAPEKIENVYMRCV
PVLQVFVHGDSLQSHLIGIVVPDPEVFIDWVKKRGIVGSYEELCQNPDVKKEVLEDMTAV
GKEAGLKSFEQVKDLHLHPEMFSVSNGLLTPTLKTRRVDIHRVFQEQITNMYSTTAI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcaggagtggttacaatcccttcgtaccagtgggggggttcgaggacctgaa
aacaaagacttctggagccttgtcccctctctccctttgtcgtcctctttctccttctcc
tccctctctctatccccgtcctctctgctgggtataggggctctggcctccttcactgca
tactggctggtgactcgccctcggcccatgcgccccccttgtgatctgaatgcccagtct
atccctgtacagggagagcccaattggaggcgttcagctttgctcaaggatgatgttctg
ttggagttctactatgatgacaccaggacagcctatgacatgttccagagaggactgaga
gtggcaggggatggcccatgccttggcttcaggaaacctggggaaccttaccagtggata
tcctacactgaggtggctgaacaggcacaggtgctgggctctgggcttttgggcaaaggc
tgccaaccaaaccctgagcagttagttggaatatttgcccagaacaggccagagtggatc
atttcagagctggcctgctacaccttctcaatggctgtggtgcccctgtatgacacactt
ggagaggaggccatggtgcatatcctcaacctggctgagatctccctggtgatctgtgac
aaggaggagaaggcagactcccttctggggaataaggagaagggtgtgactcctactctc
tcctgtctggtgctcttcaatccctgcagtgatgccatagtggagagggggaagaactgt
ggagtggagattcttgaactcacacagctcatggaacttggacgacagaacctcaaagat
cctgcgccaccccaaccccaggacctggcagtcgtgtgcttcaccagtggaaccacagga
aagcccaagggagccatgatcacccacggcaacatcgcctccaattcctcctctgttatt
aagatcctggaggggtcatttgtaattcagcaagaggacgtgtcaatatcctacctgcct
cttgcccacatgtttgagaggatgattcaggtgtccatgctatgtcatggggccagggta
ggattctaccagggggatatctccctgctcatggatgatattaagactctgaaacccacc
ttcttcccagtggtgcctcgcctactcaaccgcatctacgacaagatcttaggctccgtg
acgtccccattgcgccgggcagtgcttcactatgcagtgaggaggaagcaggctgagctc
agcagtggggtggtacgtaacaacagtctgtgggacaggctggtgttcaacaggattcag
gctaatttaggaggtaatctgaggttcatcctgaccgcctcggcccccatctcccccacc
gtgctctccttcctcagggccaccctcggctgtctgatctttgagggctacgggcagact
gaatgcacagcaggctgcaccttctccatgccaggtgactggagtgcaggccatgttggt
gctccattgccctgtgccatggtgaagttgattgacattcctgatatgaactattatgcc
aagaacggagaaggagagatctgtatccgtggccacagtgtgttccggggatacctgaaa
gatgaggagaaaacaacagaggccctggaccgtgatggctggctgcacagtggagacgtg
ggccagtggttaccgaatgggacacttcgcatcatcgacaggaagaagcacatcttcaag
ctgtcccagggagagtacattgcccctgagaagattgagaatgtctacatgcgttgtgtc
cctgtgctacaggtctttgtgcacggagacagcctacagtctcacctgattggtattgtt
gtgccagacccagaagtgttcattgactgggttaagaagaggggaatcgttggatcctat
gaggaactctgccagaatccagatgtgaagaaagaagtgttagaagacatgacagccgtg
gggaaggaagctgggctgaagtcatttgagcaggtgaaggacctgcacctgcatccagag
atgttcagcgtgagcaacggtctcctcacccccactctgaagaccagacgagtggacatc
cacagggtcttccaggaacagatcacaaacatgtatagcacaacagccatctag
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