Oncorhynchus nerka (sockeye salmon): 115111071
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Entry
115111071 CDS
T07952
Symbol
rnf180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115111071 (rnf180)
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115111071 (rnf180)
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115111071 (rnf180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
Nop53
RING_XB3-XBAT31
zf-RING_6
zf-ANAPC11
FYVE
Motif
Other DBs
NCBI-GeneID:
115111071
NCBI-ProteinID:
XP_029492817
LinkDB
All DBs
Position
LG27:complement(30845756..30854071)
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AA seq
379 aa
AA seq
DB search
MEAPEGQGRLQRGLPSPGQPHASYQRSSTTLRSPRQASGSISPTLLRPSIRIRTSTLSPR
RLLQRMDITETRCGMYTVREPGAFWVEPGIGIGQLSPRRRTRTRLFSHSSLELEEEEEGE
EEEEEEGGEAGGSGVIGVVTQTLTRAVPLSPVPAAMDRRMTKRERNRVKSLRKRQRRRER
WRQSQLLENRQSSTGNPSSSSEEEDDDVSAGDREGFICAVCLDVYFSPYMCHPCNHIFCE
PCLRTLAKNSPTNTPCPLCRTTITHVFFQTELNHTARTFFPKEYFSRKQTFQKASCAKWP
LPSCRKLFRIFGGFQRQASPIARRQFPHGGYRLDAMDFEDNSRGWRFDIDMVIIYIYSVN
WVIGFIIFCFLCYFFFPSF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccagagggtcaggggagactgcagagaggactaccctcacctggacaaccc
cacgccagttaccaacgatctagcaccaccctcaggtctccacgccaagcctccggctcc
atctctcccaccctactccgcccatccatccgaatcagaacctccactctgtcaccaagg
agactgttgcaaaggatggacatcacggaaacgcgatgtggcatgtacacggttagagag
ccaggtgcattctgggtagagccagggattgggattggccaattgtccccgagaagaagg
actcggacacgcctcttctcccacagcagcttagagctggaagaggaagaagagggagaa
gaagaggaagaggaggagggaggagaggcagggggtagtggtgtgataggggtggtgact
cagacgctgactagggctgtgcccttgtcccctgttccagcagcgatggataggaggatg
actaaaagagagaggaacagggtgaagagtctgaggaagaggcagaggaggagagagaga
tggagacagagccagctgctggagaatagacagagttcgacggggaacccatcgagcagc
agtgaggaggaggatgatgatgtgagtgccggggacagagagggcttcatttgtgctgtg
tgtctggatgtttacttcagcccctacatgtgccacccctgtaaccacatcttctgtgag
ccctgcctccgtaccctggctaagaacagcccaaccaacaccccttgcccactctgcagg
actaccatcactcacgtcttcttccagacggagttgaaccacacagcacggacgttcttc
ccaaaggaatacttttcccggaaacaaactttccagaaggcaagctgtgcaaaatggccg
ctcccaagctgcaggaaacttttccgtatttttggaggtttccagaggcaagctagtcca
atagccaggcgtcagtttccccacggggggtaccgtctagacgccatggactttgaggac
aattctcgcggctggcgctttgacattgacatggtcattatctatatctattctgtcaac
tgggtcatcggcttcatcatcttctgcttcctctgctacttctttttcccttctttctaa
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integrated database retrieval system
