Oncorhynchus nerka (sockeye salmon): 115111156
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Entry
115111156 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, delta-2-like
KO
K05207
glutamate receptor delta-2 subunit
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115111156
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115111156
Ion channels [BR:
one04040
]
Ligand-gated channels
Glutamate (ionotropic)
115111156
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
115111156
NCBI-ProteinID:
XP_029492886
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All DBs
Position
LG27:complement(2281828..2828210)
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AA seq
983 aa
AA seq
DB search
MGLWAIFDESARKDDEVFRMAVADLNLNNEILETEKITISVEFVDGNNPFQAVQEACELM
NRGILALISSVGCMSAGSLQTLADAMHIPHLFIQRAPAGTPRSSCPLVSRGRQDDYTLFV
RPPVYLNDVILQVVNEYSWQKFIIFYDQEYDIRGIQDFLDKTSQQGMDVSLQKVESNINM
MITSMFRTMRVEELHRYRDTLRRAVLFMSPVTAKAFITEVVETNLMAFDCHWIIINEEIS
DQDVQELVMKSIGRLTLIRQTFPLPQNTSQRCVKHNHRINTSLCDPKDPKAQTLEITNRY
IYDTVLLLANTFHRKLEDRKWHSMASLTCIRKNSKPWQGGRPMLDNVKKSGVSGLTGFLE
FTDNGTNPNIYFEILGTNYGEDRGRGVSKLATWDPVHGLNGTLTDRKLENNMRGVVLRVV
TVLEEPFVMVSENVLGKPKKYQGYSIDVLDSLSNYLGFKYEIYVAPDHKYGSQQSDGVWN
GLMGELVAKRADVGLSALTITPERESAVDFTTRYMDYSVGVLLRKAERTVDMFACLAPFD
LSLWACIAGTVLLVGILVYLLNWLNPPRLPMGAVSSTTFYNSMWFVYGSFVQQGGEVPYT
TLATRMMMGVWWLFALIVISSYTANLAAFLTITRIENSIQSLQDLSKQTELPYGTVLDSA
VYEQVRSKAMNPFERDPMYSQMWRMINRTGGAENNVDESKEGIRKVKYGRFAFVWDSAVL
EYMAINDEDCSFYTVGSNAPDRGYGFAMQHGSPYRDIFSQRILELQQNGDMDILKLKWWP
RDSPCDLYSAVHTKHRGSALDIHSFAGVFCVLAAGVVLSCVIAMVETWWTRRKGSRVPSK
EDDKEIDLEHLHRRVNSLCAEDDSPHKQFSTSSIDLTPLDMDSMPAARQALEQISDFRNT
HITTTTFIPEQIQTLSRSLSTKAQQGFAFGPVQDHRTGGTFRQRAPNGGFFRSPIKTMSS
IPYQPTPQPNFSYGNDPDRGTSI
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgggcctctgggccatctttgatgagtctgccaggaaggacgacgaggtgttccgcatg
gccgtggcggacctcaacctcaacaacgagatcctggagactgagaagatcaccatctct
gtggagtttgtggatgggaacaaccctttccaggcagtccaggaagcctgtgagttgatg
aacagggggatcctggctcttattagctcagttggctgtatgtcggcgggctccctgcag
acgctggcggacgccatgcacatcccgcacctgttcatccagcgtgcccctgccggcacc
cctcgctccagctgtcccctcgtcagccgcggtcgccaggacgactacaccctcttcgtt
cgcccgcccgtctacctcaacgacgtcatcctccaagtggtcaacgagtacagctggcag
aagttcatcatcttctacgaccaggaatacgatatccgtgggatccaggacttcctggac
aagacgtctcagcagggcatggacgtgtcgctgcagaaggtggagtccaacatcaacatg
atgatcaccagcatgttcagaaccatgagggtggaggagctccaccgctaccgggacacg
ctgcgccgggccgtgctcttcatgagtcccgtcaccgccaaggcctttatcactgaggtt
gtggagacgaatctcatggcattcgactgtcactggatcatcatcaatgaggaaatctca
gaccaggacgtccaagaactggtgatgaagtcaattgggcgtctgaccctgatcaggcag
accttccccctgccccagaacaccagccagcgctgtgtcaagcacaaccaccgcatcaac
acctccctctgcgaccccaaggaccccaaagctcagacactggagatcaccaaccgctac
atctacgacacagtgctgctattggccaacactttccacaggaagctggaggacagaaag
tggcacagcatggccagcctcacctgtatccgcaagaactctaagccctggcaaggagga
cggcctatgctggacaatgtcaaaaagtctggagtgagtggtctgactggcttcctggag
tttacagacaacggaaccaaccccaacatctactttgagatcctggggaccaactatggc
gaggacaggggcaggggtgtcagtaagctggccacctgggacccagtgcacggcctcaac
ggaacgctgacagacaggaagctggagaacaacatgaggggcgtagttctgcgagtggtc
actgtcctggaggagccctttgtgatggtgtcagagaatgtccttgggaagcctaagaag
taccaaggttactccatcgacgtactggattccctctctaactacctgggcttcaagtac
gagatctatgtggcccctgaccataagtacgggagccaacagtccgacggggtctggaac
ggactgatgggagagctggtcgccaagcgggcagacgtgggtctctcggctctcaccatc
acgccagaacgggagagtgcggtggacttcaccacacgctacatggactactcggtgggt
gtgctgctcaggaaggccgagcgtaccgtggacatgttcgcctgcctagcgccctttgac
ctgtcgttgtgggcgtgcattgcgggcaccgtgctgctggtgggcatcctggtctaccta
ctcaactggttgaacccgccgcgcctgcccatgggtgcggtctcctccaccaccttctac
aattccatgtggttcgtctatggatccttcgtccagcagggtggtgaggttccgtatacc
accctggccacgaggatgatgatgggggtatggtggctctttgctctaatcgtcatctcc
tcctacacggccaacctggctgccttcctcaccatcacccgcatcgagaactctatccag
tctctacaagacctttccaagcagacagagttgccgtacgggacggtgttggactcggct
gtgtatgagcaggtgcgcagtaaggccatgaacccctttgagagggaccctatgtactcc
cagatgtggcgcatgatcaaccgcaccggaggggccgaaaacaacgtggacgagtccaag
gagggcatccgcaaggtgaagtacgggcgttttgcctttgtgtgggattcggcggtgctg
gagtatatggccatcaacgacgaggactgctccttctacactgtggggagcaatgcacca
gatcggggctacggcttcgccatgcagcacggcagtccatacagggacatcttctcccag
aggatcctggagctgcagcagaacggggacatggacatcctgaagctgaagtggtggccc
cgggacagcccatgtgacctgtactcagcggtgcacaccaaacaccgcggcagcgccctg
gacatccacagcttcgccggcgtgttctgcgtgctagcggccggagtggtgctctcctgt
gttattgccatggtggagacctggtggactaggaggaagggctcacgagtcccctccaag
gaggacgataaggagatcgacctggagcaccttcaccgccgggttaacagcctgtgcgcg
gaggacgacagcccccacaagcagttctccacctcctctattgacctgacgcccctggac
atggactctatgccggctgcccggcaggccctggaacagatcagcgacttccgcaacaca
cacatcaccaccaccaccttcatccccgagcagatccagaccctcagccgcagcctgtcc
accaaggcccaacagggcttcgccttcggtcccgtgcaggaccaccggactgggggaacc
ttcaggcagagagcccccaacggtggcttcttccgcagtcccatcaagacaatgtcctcc
ataccctaccagcccactccccagcccaacttcagctacggcaacgaccccgatcggggt
acatccatatga
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