Oncorhynchus nerka (sockeye salmon): 115111166
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Entry
115111166 CDS
T07952
Name
(RefSeq) myocyte-specific enhancer factor 2C-like
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115111166
04371 Apelin signaling pathway
115111166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115111166
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
115111166
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
115111166
NCBI-ProteinID:
XP_029492896
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Position
LG27:complement(5984751..6083914)
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AA seq
472 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEEKYRKI
NEDIDLMISRQRLCVSTTLPGPSSHSPLPSLSFFSFLSFSLFPSVRLMSFRWDLSSNGLL
LFSLFLFTPFHLSGGLMGADLTTGAGTSAGNGYGNHHRNSPGLLVSPGSMNKSMQAKSPP
TMNLGMNSNRKPDLRVLVPPGVKNNMPSINQRINNSQSAQSLATPVVSVATPTLPGQGMG
GYPSAMSTSYGTEYSLSSADLSSLSGFNSGSSLHLGSMSGWQQQHLQNMQQHSALSQLGN
CNSNHLCHNSNLSLPSAQSLHIKSEPVSPPRDRTSSTPGGYGVPQQQNPSSRQDSGRSPV
DSLSSCSSSHEGSDRDDHRNEFHSPLGMSRPALDGCESPSVKRVRLSEGWAT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagatcacgcggattatggatgaacgcaacagacaggtgacg
tttacgaagaggaagtttggcctgatgaagaaggcgtatgagctgagcgtgctgtgtgac
tgtgagattgctctcatcatcttcaacagcaccaataagctgttccagtacgccagcacc
gatatggacaaggtactgctcaagtacactgagtacaacgagccccacgagagcaggacc
aactctgacattgtggaaacattgagaaagaagggcctaaatggctgtgacagccctgac
cccgacgcagacgactccgtcggccacagccctgagtctgaggaaaagtacaggaaaata
aatgaagacattgatctgatgatcagcagacagagactgtgtgtgagtacaacacttcct
gggccttcctctcactctcctctcccctctctctctttcttttcttttctttctttctct
ctttttccttccgtccgtctgatgtcctttcggtgggatctctcctctaatggtttactt
ctcttttctcttttcctcttcaccccctttcatctttcaggtggcctcatgggtgctgac
ctcaccactggtgcgggcaccagtgctggcaatggctacgggaaccaccaccgtaactcg
cctggtctactggtctctccgggcagcatgaacaagagcatgcaggccaagtctcccccg
accatgaacctgggaatgaacagcaaccgcaagcctgacctgcgggtgcttgtcccccct
ggagtcaagaacaacatgccctccatcaaccagagaataaacaactcccagtctgcacag
tcattggccacccctgtggtttcagtagcaacgcccaccctacctgggcaaggaatgggc
ggttacccatcagccatgtccacttcatacggtactgaatactcgctgagcagtgcagac
ctgtcctccctgtccggctttaacagtggtagctccctccacctgggctccatgagcgga
tggcaacagcaacacctccagaacatgcagcagcactctgccctcagtcagctaggaaat
tgcaatagcaatcacttatgtcacaattcaaatctctccctgccttctgctcaaagcctg
cacatcaagtccgaacctgtttctcctcctagagatcgcaccagcagcacaccggggggc
tacggcgtcccgcagcaacagaacccctcgtctcgccaggactcagggcgctcccctgtc
gacagcctgagtagctgcagcagctcccacgagggcagcgaccgcgacgatcacaggaac
gagttccactctccactgggaatgtcccggcccgccctggacgggtgcgagagcccctcg
gtcaaacgcgtgcgcctgtccgagggatgggccacatga
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