Oncorhynchus nerka (sockeye salmon): 115111168
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Entry
115111168 CDS
T07952
Name
(RefSeq) snRNA-activating protein complex subunit 4-like
KO
K09453
snRNA-activating protein complex subunit 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115111168
03021 Transcription machinery [BR:
one03021
]
115111168
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
115111168
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
115111168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SLIDE
Motif
Other DBs
NCBI-GeneID:
115111168
NCBI-ProteinID:
XP_029492898
LinkDB
All DBs
Position
LG27:complement(7269988..7284467)
Genome browser
AA seq
1337 aa
AA seq
DB search
SPGNLEAERERIQREIEELESTLGPGAFNAEILSDVDGQGSSTELSEEDSAEELDLPQNT
DTCLQINLVYQEVLKEKLEYLEQLLTDNQQQQKEITSQLSGTGTPQATTSGEPTLKLFLG
SFLKPYFRDKVTFLGPPANPETREKMSKRIRPTHDIKMKKWEGWQKTLLINAVVKDSMKR
MIQPKLSKVEYLTQKMAKAEDVEKLILRKQITAIEKDIEAISALKEDELMGGRYDDHDWQ
KISNIDFEGIREAEDIKSFWQNYLHPSINKASWKEDEIEMLKKVAVKYGHHNWDQIADKL
GTNRTAFMCLQTYQRYICTDFKRRMWCGVEDDILRELVEKMRIGNYIPYTQISYFMEGRD
SCQLMYRWTQVLDPTLTKGHWSKEEDEMLLRAVAKHGAGNWWKMRQDVPGRNDSQCRDRY
VDVLIGNVKKGPFDEEEKAQLRQLVEKYGCKWAKIAAEMPNRIDSQVLQQWRRMTGYKPR
PRRDRSRRGLQRRKAVAVRSIKSRLKKLDNDVHSSADEEESVKMEFMDSDDEKKQKFSEL
YGSDQESDIFEDYTQPDMEQWIPMREKQFEGMVRSVMVEWPSKYTTQEQAATDSQAAARK
FMVVRSTVLDRFGEPAATVIGQNPPILAKKDCNSDLAMLQVCYGEVRNLITWKKTNATKH
KSSGSTSSDQGTPHNCSRQKYSSANSETYTTLNYSLQLAVTPWVGNVLMPPPISSNKLSE
ADMVRERSESIGLTKTPVFLFFLQVLRVDAEGCKQIITMRNKQAVLTGHRSWEAKQALLK
KTTERHGPRTVASMLKRKGNEQQNSQKQNSQLVMMIPQTFVIGQPVVQSTPHPMVPFTPT
SRQQLMPSPLTQPGPSTPSRPIPTTPGQPLPSTPSQPILPAPVQSSIIIDRVNVQINENL
SAKKHNLKPTEKSQAPKEVKDAAIAKKSVEQSPKRKKARTQSPPKGNLVGQLSNIILSPP
QTAWVLTRDGLVPISGIGIQMTPQNLPANAFAPACPSPVIINQQVPLTLNAAAAQASSNV
THVCPSPSVSSIAQGTASPSVFSSPSASTTFISNTAPRMTNPVNSMRMTNPVLQTVATTC
PQLNAVSPVLSVPKNTVISAPIRPQTGPPQAFVLNVPPGSLPASFPQGAFRIVQLYPPKR
VPPPRNPEVIQFDPNLIFMEDPAKVSEWLNGKNGIALPELDVTLPYLPPFVSSLDTLSSL
LKCKTTLAISAMMVLHPEEKENQEEEQQVAAVRSLVAERFIHNPGYLLLKARFLSCFTMP
ALLATINPVKFPMSPTPDHSDVEEEPFRNPPGMQIYTLYEQQTTLQAPLLSTDGTGSPAT
FFSGITTRNKSRDLDME
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
tctccggggaacctggaggcagagcgggagcgaatacagagggagattgaagagttggag
tccactcttggtccaggtgcatttaatgctgagattctgtcagatgtggatggccaagga
agttcaacagaattgagcgaagaggacagtgctgaggagctggacctaccccagaacaca
gatacatgtctgcaaattaacctggtttatcaggaagtgttgaaagagaaattagagtac
ctggaacaactgttaacagacaatcaacagcaacaaaaagagattacgtctcagctatct
ggcacaggaactccccaggctaccacatctggagaacccacactgaagcttttcttgggg
agctttctgaagccctatttcagagataaagtcacatttctgggcccacccgctaatcca
gaaaccagggagaagatgagtaaaagaatcagacctactcacgacatcaagatgaaaaaa
tgggaggggtggcagaagactctgctgataaatgctgtggtcaaagacagcatgaaacgc
atgatacagcccaagctgtccaaggttgaataccttacacagaaaatggccaaagctgaa
gacgtggaaaagctaatcctgcggaaacaaatcactgcaattgaaaaggacattgaggcc
atcagtgcactgaaggaggatgagctgatgggtggccgctatgatgaccatgactggcaa
aagatttccaatattgattttgaaggcatccgtgaagctgaggacataaaaagcttttgg
cagaactacctgcatccatccattaataaagccagttggaaggaagatgaaattgagatg
ctcaagaaagttgctgtgaaatatgggcaccacaactgggatcagattgctgataaactt
gggaccaacaggacagccttcatgtgtctccagacataccaacgctacatctgcactgac
ttcaagaggaggatgtggtgcggagtggaggacgacatccttagagagctggtggagaag
atgcggatagggaactacatcccttacacccagatctcctatttcatggaaggccgggat
tcatgccagctgatgtatcggtggactcaggttctggaccccaccctcacgaaaggccat
tggtctaaagaagaagatgagatgctactgagagcagtggctaaacatggggcggggaac
tggtggaagatgcgtcaggatgtgcctggcagaaatgatagccagtgtagggacaggtat
gtggacgtcctgattgggaacgtgaagaaggggccatttgacgaggaggaaaaggcgcaa
ctccgacaattggtggagaaatacggatgtaaatgggctaagatagctgctgaaatgcct
aacagaattgacagccaggtccttcaacagtggaggagaatgacagggtacaagcccaga
cctcggagggacagaagtagaagaggattgcagaggagaaaggcagtggctgtgaggagc
atcaagagtaggctgaagaagctagacaatgatgtgcactcaagcgccgatgaagaggag
agcgtcaagatggaatttatggacagtgacgacgagaagaaacagaaattctctgaactg
tacggatctgatcaggaaagtgacatttttgaagactacacccaaccagacatggagcaa
tggatccccatgcgagagaagcagtttgaagggatggtgaggagtgtgatggttgaatgg
cccagcaagtacacaacgcaagagcaggcagcgacggacagccaggccgcagcacgcaag
ttcatggtggtccgctccaccgtcctggaccgctttggcgagcctgcggccactgtcatt
ggacaaaaccccccaatcctggcaaagaaggattgcaacagtgacctggccatgctccag
gtatgctatggagaggtgaggaacctgatcacttggaagaaaacaaatgccacaaaacat
aaaagcagtgggtctacaagcagtgaccaggggacgccccacaattgctcaaggcaaaag
tactcctctgccaacagtgaaacctacaccactctcaactattcccttcagttggcagtc
actccctgggtgggcaatgtgcttatgcccccaccaatctcttcaaacaagctcagtgaa
gctgacatggtgcgagagagatcagagagcattggactcaccaagaccccagtgttcttg
ttctttctgcaagtcctccgtgtggatgctgagggctgtaagcagataattacaatgcgt
aacaaacaagcggtactcacgggacacagatcttgggaagcgaaacaggctttattgaaa
aaaacaacggaacggcatggtcccagaacggtagccagtatgctgaaacggaagggaaac
gagcagcagaacagccagaaacagaacagtcaacttgtgatgatgatccctcagaccttt
gtcattggacagcctgtagtacagtccaccccacatcctatggtcccattcactccaact
tccagacaacaactcatgccttctccacttacccaacccggaccctctacccccagccga
cccatacctaccacccctggtcaacctttaccctcaacccccagccaacctatactccct
gctcctgtccaatcctcaatcataatagacagggtcaatgttcagataaatgagaatctt
tcagcaaagaaacacaatctcaaacctactgagaaatcacaggcccccaaagaggtcaag
gatgctgcaattgcaaaaaagtcagtggaacagtcgcctaaacgcaagaaagcccgtacg
caaagtcctcccaaaggaaacctggttggccaactttctaacataattctgtcccctcca
caaactgcctgggtcctgacgcgcgatggacttgtgccaatcagtggcattggcattcag
atgacacctcagaatctaccagcaaatgcttttgcacctgcttgtccatcacctgttatt
atcaaccagcaagtccctctaacactaaatgctgctgcagcacaggcctcctccaatgtg
acccatgtctgcccatctccctctgtatcatccatagcacagggaactgcctccccatct
gttttctcctctccctccgcctccactaccttcataagcaacactgctccaaggatgacc
aacccagtgaacagcatgagaatgactaacccagtcctgcagactgtggcaaccacttgt
ccccagctcaatgcagtgtcacctgttctctctgttcccaagaacacggtcatctcggct
cccattagaccacagactggcccgccacaggctttcgtcctcaacgtccctccaggctct
cttccagcctcattccctcagggagccttccgaatcgtgcagctttatccccctaaacgt
gtccctccaccccgcaatccagaagtaatacagtttgatcccaacctgatattcatggag
gacccggccaaagtgagcgagtggttgaatggcaagaatggaattgcgcttccggagttg
gatgtcactctaccctaccttccaccctttgtcagcagcctggataccctgtcgagtctc
ctgaaatgtaaaacaacattggcaattagtgccatgatggtcctgcacccagaggagaaa
gagaaccaggaagaggagcagcaggtagcggcagtgcggagcctcgtggcagagcgtttc
atccataacccaggctacctcctcctgaaggctcgcttcttgtcttgtttcaccatgcct
gctcttctggctactatcaatccagtcaaattccccatgtctcccaccccggaccacagt
gatgtggaggaggaacctttcaggaaccctccagggatgcagatctatactttgtatgaa
cagcaaacaacactccaggcccctctgctaagcactgatggaacaggatctcctgccacc
ttcttctctggaatcaccacaagaaataaaagccgtgacctagacatggagtaa
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