Oncorhynchus nerka (sockeye salmon): 115111206
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Entry
115111206 CDS
T07952
Name
(RefSeq) nodal homolog
KO
K04666
nodal
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04060
Cytokine-cytokine receptor interaction
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115111206
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115111206
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
one04052
]
115111206
Cytokines and neuropeptides [BR:
one04052
]
Cytokines
Transforming growth factors (RSTK binding)
115111206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
115111206
NCBI-ProteinID:
XP_029492926
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Position
LG27:complement(20125156..20127125)
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AA seq
409 aa
AA seq
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MVDLAPLVFCAFLVCFFRLCSSEKLLHHSRHYKSSPESSLGYLNSYHPHRYPLYMMQLYR
SIKTAADNSPSPHDSDSVLSLIAKGCHQVGEKWTITFDMSSISASDDVQLSELRIRLPAF
SASKHVTLDIYHSRKQDCESDTELCSEERLLLGSFGASPSDTRSQWNVFNVTALLKYWMH
QGDTVTQSQEERVLVIEKEHESGAPDDGEEIDTAYIGHLTHKKIKVHHPTDERVMMVVFS
KHNLPRDGESAPTLIRTVEHSKYAILDKVSREAQGRRHKRNRMERVRMAGGIAANATGSA
AEAVQRPLCRKIDMWVDFDHIGWNEWIVYPKRYNAFRCEGECPTPVDESFSPTNHAYMQS
LLRLYHPDRVGCPSCVPTRLSPLSMLYYGDEDVVLRHHEDMIVEECGCH
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggtagacttggcaccgctcgtcttttgcgcgttcctcgtctgctttttcaggctttgc
agttcggagaaactgttgcaccattcccggcattacaagagctcacccgagtctagttta
ggatatctgaattcgtaccatccccataggtaccctctatacatgatgcagctgtaccgc
tccatcaagaccgcagccgataacagcccctctccacacgattctgattcagtcctcagt
ctgattgcaaaaggatgccatcaagtgggtgagaaatggaccatcactttcgacatgtcc
tccatctctgcgagtgacgacgtccagctgtcagagcttcggatcagactaccagcgttc
tccgcttccaaacacgtcacactggacatttatcactcacgaaagcaggactgcgagtct
gacactgaactgtgcagcgaggagcgccttctcttgggcagctttggcgcatcgcccagt
gacaccaggtctcaatggaacgtgttcaatgtgacagctctgctcaaatattggatgcac
cagggagacacagtgacgcaaagccaagaagaaagagtccttgtgatagagaaagaacac
gagagtggggcaccggacgacggagaggaaattgacacggcctacatcgggcatcttacg
cacaagaaaatcaaggttcaccatccgacagacgaacgggttatgatggttgtcttctcc
aagcacaacctgccccgagatggcgagagcgcacccactctcatccgtactgtggagcac
tccaaatacgcaattttggacaaagtcagccgtgaagctcaagggcgacgccacaagaga
aaccgaatggagagagtgcggatggctggcggaattgcagctaatgctactgggtccgcg
gctgaagccgtccaacgcccactctgtcggaagattgacatgtgggtagatttcgaccac
atcggctggaacgagtggattgtgtatccaaaacgctacaacgccttccgctgcgagggc
gagtgccctactccggtagatgaatccttcagtcccaccaaccacgcatacatgcaaagc
ctgttgagactgtaccatccggatcgcgtgggttgtccgtcctgcgtgcccacgcgcctc
agcccgctgtccatgctgtactacggggacgaagacgtggtgttgcggcatcacgaggac
atgatcgtggaggagtgtggctgtcactga
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