Oncorhynchus nerka (sockeye salmon): 115111248
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Entry
115111248 CDS
T07952
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115111248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115111248
Domain-containing proteins not elsewhere classified [BR:
one04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115111248
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GFIT
Motif
Pfam:
LIM
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
115111248
NCBI-ProteinID:
XP_029492973
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Position
LG27:1458851..1485013
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AA seq
521 aa
AA seq
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MVKHKRYDQGVWLYHVPQLFHSSSSSHLTPLEGDGDLGEIQAIGSDWEASDVHHNDDSSA
TDQIHTAPLSPIHSSSPVQPLTHLSPVSAVQPLLSPKPVRYGIHTNLLYPNVLISVKSAA
PFPLFYGCRRELLLNPLEFLPRGGPCPPALTPSAPTLAIRSHSTVIGLQARTPHRSPEGT
VSQSLLDALLITPITTLPPLRLRKKKRRSVSALHLPNNKRVSWHQSVTDLGDPNLSSPVN
AVYIFSEEVEEPDTSSHMLSAVKTMTKGPAGSPSNSITFTTTQGSGFPKPGLQTCFGVRG
NGTTNVLPKGPVPERPAPQPHPKDQDTLVQMAEHIPAGTRTPMCGHCNMDIRGPFLVAMG
KSWHPEEFNCAHCRISLADIGFVEEQGSVYCEHCYEDFFAPSCSRCQMKILGEVINALKQ
TWHIHCFLCASCQQPIRNNTFHLEDGEPYCERDYYSLFGTGCHGCEFPIEAGDKFLEALG
FTWHDTCFVCVICCTTLEGQAFFSKMDKPLCRKHAHSVVKI
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcacaaacgttatgatcagggcgtgtggctctatcatgttccacaacttttt
cattcctctagcagttcccatttgacaccactagagggcgatggtgacctaggagagatt
caagccattgggtcggattgggaagctagtgatgtccatcacaatgacgactcctctgct
acagaccaaatacatacggctcctctctcacctattcacagctcctctccagtacagcca
ctgacacatctttctcctgtgtctgcagtacagccactactctccccaaagccagtgagg
tacgggattcataccaatctactctatcccaatgtccttatcagtgtaaagtctgctgcc
ccctttcctctgttctatgggtgcaggcgagagctcctgttgaacccactggagttcctc
cctcgaggtggtccctgcccaccggccctcacccctagtgcaccgactctggctatacgg
tcccattctactgttattggtttacaggccagaaccccgcacaggtcacctgaggggacg
gtctctcagtccctattggatgccttgctcattacacctatcaccaccctcccgcccctc
cgcttgaggaagaagaagcgtcggagtgttagtgccttacacctgcccaacaacaagaga
gtctcctggcaccaatcagtcactgatctgggtgaccccaacctctcctctcctgtcaat
gctgtctatatctttagtgaggaggtggaggagccagacaccagttctcacatgttgtct
gcagtcaagaccatgaccaaaggacctgctggcagccccagcaactccatcacctttacc
accactcagggttcaggtttccctaaaccaggccttcagacatgttttggggtgaggggg
aacggcaccaccaatgttctccctaagggccctgtcccagagaggccggccccccagccc
catcccaaagaccaggacactctggtgcagatggccgaacacattcctgcagggacacgc
acgcccatgtgtggccactgcaacatggacatcagaggcccattcctggtggccatggga
aagtcctggcaccccgaggagtttaactgcgcccactgccggatctccctggcagacatt
ggcttcgtggaggagcaaggctcggtctactgtgaacactgctacgaggacttcttcgca
ccttcctgtagccgctgccagatgaagatcctgggggaagtgatcaatgccctgaaacag
acctggcacatccattgtttcctgtgtgcatcgtgccagcagcccattaggaacaacacc
tttcacctggaggatggagagccctactgtgaaagagactattactccctttttggtacc
ggttgccatggttgcgagttccccatagaggcaggggacaagttcttggaggctttgggc
ttcacctggcatgacacctgttttgtgtgtgtgatctgctgcaccactctggaaggtcaa
gccttcttctccaaaatggacaagcctctgtgcaggaaacatgcacatagtgtggtgaaa
atctga
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