Oncorhynchus nerka (sockeye salmon): 115111272
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Entry
115111272 CDS
T07952
Symbol
sema6a
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
115111272
NCBI-ProteinID:
XP_029493011
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Position
LG27:complement(3261230..3357798)
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AA seq
1012 aa
AA seq
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MRSEALLLYFTLLQIAGAGFPEDSEPISISHGNYTRQYPAFVGHKPGRNNTQRHKLDIQL
VIIMNRTLYIAARDHIYTVDTDTANSEEIFFSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQNDDSLFVCGTNAFNPSCRTYKMDTMDAVGEDISGMARCPYDAKHSNVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKCLKEPYFVQAVNYGEFIYFFYREIG
MEYNTMGKVVFPRVARVCKNDKGGSQRVLEKQWTSFLKTRLNCSIPGDSHFYFNILQAVT
DVIHINGRDIVMATFSTPHNSIPGSAVCAYDMADVANAFTGRFKEQKSPDSTWTPVPEEK
VPKPRPGCCAGTPSLEKYKVSNEFPDDTLNFIKQHPLMDEAVPSITNRPWFLKTMVRYRL
TRIAVDSAAGPYRNHTVVFLGSEKGIILKFLAKMNSGFLNDSLFLEELNVYNPEKCSIDG
VDDKRIVSMQMDSQGHSLFVAFSSCVVKVPLSRCEKHDKCKKSCIASRDPYCGWVSEGAC
RQVVLDPKSAFEQDVEHGNTDGLGDCQNAFVALNDVQSSPHSHERPRHGHPTLPFPTTAH
PQAGGPLGRGGMVEQADPPMPSDKRDPYMAVPSQTQQDATGVIRESYQKGRDQLVPVTLL
AIAVILAFAMGAILSGILVYCVCDHRRRDVELTRRKDKDHVHDRRGSMNSVTKLTGLFET
GVKDGHPEAILTPLMHNGRLTNGKMLIKADQHHLDLAGMPTPESTPMQPRRKPSWGSREW
ERNQNLINACTKDLPPMGSPVISPDLALRASPGHIPSVVVLPQHQHQKAYQHEYVEQPHR
SDLSQMSMDDQGATLEYKALKSPCHGLNLVESDGLPPRVPQREASLTIPPAVPQMGKRLE
VHSSVYGHEFKRGYPMSAQKGSALKKHNTNSSNSSHMSRNPSFNRVEMPPPAPQRVDSMH
MTSQGMSLSRQPSISSYGSLPRTGVKHLKPDVPPKPSLVSLSTSVKSNDSCT
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaggccttgttgctgtatttcacgctactgcagattgccggggctggcttc
ccagaagactcggagccaatcagtatttcacatggcaactatacaaggcagtatccggct
tttgttggacacaaacctggaagaaacaatacacaacggcacaaactggacatccagctg
gtcattattatgaaccgaacgttgtatatcgctgccagggatcacatatacacggtggat
acagacaccgccaactccgaggagatctttttcagcaagaaactgacatggaagtccaga
caggcagacgtggacacctgccgaatgaaggggaagcacaaggacgaatgtcacaatttc
atcaaggtcctcctacagcaaaacgatgactccttgtttgtgtgtggaacaaatgctttc
aacccctcctgtcgaacttacaagatggacaccatggatgctgtaggggaggacatcagt
gggatggcacggtgcccatatgatgccaagcactccaacgttgccctgtttgctgatgga
aagctctactccgcaacagtaacagatttcctagcgatcgatgcagtcatttatcgtagc
cttggtgacagcccaacgttgcgcactgtcaagcacgactccaagtgtctcaaagagccg
tatttcgtacaggcagttaactacggtgaattcatctacttcttctatcgcgaaattggc
atggagtacaacacaatgggaaaggtggtgttcccccgggtggccagggtgtgtaagaac
gacaagggcggctcccagagagttctggagaaacagtggacttccttcctgaagacccgt
ctcaactgctccatcccgggagactcccacttctatttcaacatcctgcaggccgtcacc
gacgtcatccacatcaatggtcgcgatatcgtcatggcaaccttctccacacctcacaac
agcatccctgggtcggccgtctgcgcctatgacatggctgatgtggccaatgcgttcaca
ggacgttttaaagagcagaagtcccctgattccacctggacacctgttcctgaggagaag
gttccaaaaccaaggcccgggtgttgcgctggcacgccatccttagagaagtacaaggtg
tccaacgagttccctgacgacaccctgaacttcatcaagcagcaccctctcatggatgaa
gctgtgccctctatcactaacaggccctggtttctcaagaccatggtgcgataccggctg
acccggatcgctgtagacagtgcagctggaccctatcggaatcacaccgtcgtttttctg
ggatcagagaaggggatcattcttaaattcctggccaagatgaacagtggtttcctgaat
gacagtctcttccttgaggagctcaacgtgtataacccagagaagtgcagcatcgacggt
gtggacgacaagcggatcgtcagcatgcagatggacagccagggacactctctgtttgtg
gccttttcctcctgtgtggtcaaggtgccgctttctcgctgcgagaaacatgacaaatgc
aaaaaatcatgtattgcctccagggatccctactgcggctgggtgtccgagggagcgtgc
aggcaggtggtgctcgacccaaaatcggccttcgagcaggacgtggagcatggcaacaca
gatggactgggagactgccaaaatgcgttcgtggccctcaacgacgttcagtccagtcct
cacagtcatgaaaggcctcgccatggccatcccaccctcccattccccaccacggcccac
ccccaagcaggaggacccctgggtcggggcggcatggtggagcaggcggacccccccatg
ccctcagataagagggacccctatatggcggtgccctctcagacccagcaggacgccact
ggggttattcgtgagagttaccagaaggggcgtgaccagctggtccctgtcacactgctg
gccatcgctgtcatcttggccttcgccatgggcgccatcttatctggtatcctcgtgtac
tgtgtgtgtgaccaccggcggcgagatgttgagctgaccaggcgtaaagacaaggaccac
gttcacgataggaggggatccatgaacagcgtgaccaagctgacgggtctgtttgagacc
ggggtcaaggacggtcacccagaggccatcctcaccccgctcatgcacaacggccgcctc
accaatggcaagatgctgatcaaagccgaccagcaccacctggaccttgccggcatgccc
actccagagtccacccccatgcagcctaggcgcaagcccagctggggaagccgcgagtgg
gagaggaaccagaacctgatcaacgcctgcaccaaggacctgccgcccatgggctcccca
gtcatctcccctgacctggctctgagggcctccccgggccacatccccagtgtggtggtg
ctgcctcagcaccagcaccagaaggcctaccagcatgagtacgtggagcagccccaccgc
agtgacctcagtcagatgagcatggatgaccagggggccacgctggagtacaaggccctg
aagagcccctgccacggccttaacctggtggagagcgacgggctgccgcctcgcgtgccc
cagagggaggcctccctcaccatcccccccgccgtgccgcagatgggcaagcggctggag
gtccactcctctgtctatggccacgagttcaagcgaggctacccgatgagtgcccagaaa
ggatctgccctcaaaaagcacaacaccaactcatccaactcctcccacatgtccagaaac
cccagttttaaccgtgtggagatgccgccccccgccccacagagagtggactccatgcac
atgacttcccaggggatgtccctctcccgacaacccagcataagctcttacggttcgttg
ccccggaccggggtcaaacacctcaagcccgacgtcccgcctaaaccctctttagtgtcc
ctctcgacgagcgtcaagtccaatgactcctgcacataa
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