Oncorhynchus nerka (sockeye salmon): 115111273 Help Entry 115111273         CDS       T07952                                  Symbol dmxl1 Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04142   Lysosome Brite KEGG Orthology (KO) [BR:one00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     115111273 (dmxl1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:one04131]     115111273 (dmxl1) Membrane trafficking [BR:one04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     115111273 (dmxl1)  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     115111273 (dmxl1)    RAVE complex     115111273 (dmxl1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_HPS5 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_SPT8 Motif Other DBs NCBI-GeneID:  115111273 NCBI-ProteinID:  XP_029493014 LinkDB All DBs Position LG27:3389392..3446125 Genome browser AA seq 3030 aa AA seqDB search MNLHQVLTGAVNPGDNCFSVGSINNQPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV GCVDSSLQGGQVAASYGSIVCVFEPVQLMNQKDRTSAELSYQWQKSGQFVLQSIVRNLAW DPTGTRLLTGSASLQLWSNISDGFDEAGEQTDMTIGDPQCPWRCIWHCKTASPIQLMKFS PDGEFFATAGQDDCLVKVWYGTSKWQSGVTKLFTPPEHNAQGELDFSFVYLAHPRTVTGF SWRKTSKYMPRGSVCNVLLTCCKDSVCRLWAETLLPSDSLLSGHTLSHVNNNGQSSDSLK SSSSKKTPSRIKTQDRNSLELNLQESWRAPLRGVAQPSLTGRLPTQQNSHHNHKTNSVPH ANSLCHFHIAASINPATDIPLLPSITSLCGGDDEEPGGPFTVHWLNNKELLLTLAMEVFL QQLRGSVEQNHSENSQEELDYEEVEEASRRAAEGGPDVASTQLPAAAVEHQVEVLLEDWN RGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLSRSVV MYACNKNVDLAIQHGRQRPAGLPHSSSVLIPYGQSKATSYSSSLRLSIFTPNVLMISTHS DGSLNQWAVSFAEESAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRTP DVDSVPAPSTTLSQPFGGGPSRVSLGAVSQDPNAIYSELILWRVDPVGPLSFSGGVSELA RINSLHSSAFSNVAWLPTLIPSNCLGVYCNSPSACFVASDGHSLRLYQAVIEAKKLLSEL SNPDISKYVGKVFNIISQQSTAKPGCIIELDAITDFQGKETQLLHVFEEDLILGSERREA TQEAPAIETASSQPGFSARFFLVVVEFTQTGRSFLHMWHLQLAAGQITMDETGAPPEKEN MTSSPINSSFSFETFSSPSAQKNKPCTSNLQSASRLTLATHRLYSQELALPDGVEVISVT PSAGHLSASSLQPAGGAPYLLATSCSDGKVRFWRCRVAAVEPDTKELTYTWEEWPLLVEE GLGNSSAVTVSGRPVTVSCCHTSRIAVAYRHNPSPHLSPNHLSPNPQQGVREPLVHVGLF QCESTGGSHWVLEQTLVLDASTPTGNNNNNMESGVKDLNVENNNLDIYLPNDDCLGTSGK SLVHLDWVSREDGSHILTVGIGSKLYMYGLLSGKPPELGLSEGPREQSSSRLVLLRSVDL VSSVEGSLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPALAKSTASNTTTTDMGSVSSL LAAMKQSHEEGLNPTPPKKSLTRSMTSLAQKLSGKRTVYDLPAEMEDYGLFEAAHHLFPT LPQYHPVQLLELMDLGKVRRAKAILSHLVKCIAGEIVALKDNGTNQDKRLRSRTISAGGS TSRDPKLFSKGESSDYTEIDSIPPLPLYALLAADEDCSPKPKDKVVSLSGDSGHGSSQTD AYDELFQSSGVGVDDLEHMDSDQEDGGAKVIDLSQYSPTFFGPEHAQVLSSHLLHSSLPG LTRMEQMSLMALADTIATTSTDIRESQSRGKGGETLDECGLKFLLAVRLHTFLLTTLPPA HRAQLLRQGLSTCHYAWAFHSEAEDELLHMLPALQKGDPTWPELRAMGMGWWLRSTNKLR RCIEKVAKASFQRQNDPLDAAIFYLAMKKKAVVWGLYRSQKNAKMTTFFSNNFGEERWRR AALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETSS TYKRILQRHVLGQDRQLPAHQDPFLRSTAYWVLEDYSRALDTLLEQPAAPNLASSTQAGH TTQPGSTSSTSLCSPEVFNFYTYLRTHPLLLRRHFGSSEKTRVGLTAEGRMANSISLVER RLFFTAAYAHLQAGCPMLALEVLSKMPKVVKRSKLPQDDTTNPDLSETKKEQASDLDWSQ PALNGFESVSDSLSNSQSDSVLSFDWGQPSVSVQDEALELKWDSDKEEEEEEEEDDDEPQ GLAMKSADNTSSVFQDAISPLTETLLDEGDFLMPSEDILAAQLKFSACLKILTTELRTLS TGYELDGGKLRYQLCQWLEREVVALQRCCSYKPCLPELALGMAGPGGEEEAQAHPGEAQR TRRHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESQQDDGVQSAVAPYLHH ASIPLLLACTASAKTVVANPIVHLTNLTHDILHTINALDSPPHPDVVNNEIYVMHTLAAS LSACIYQCLCDGHNHSHVNQFTGIVYQSILSFQHHSVRTVSMEETVLPNTHPAQWPGIST LIRLLNSAGEESQPGLAVLLCEILTAVFLSLFVHGLATHSSNELFRIVAHPLNSKLWVAV FGGGARTPITEKPSKAKSPPAANEEFDRKPRRFKLLSSSPRSASREGPETPSPTSPVVEQ ETSIFKEHFVPPELSIWDYFIAKPFLPPSESRVEYDSEESQGSQDEDDDDDEDEFGDFDP NSPSREHSNPNSYSWCLMRLAMVQLVLGNLKSFYPMAGHDLLDLPVGSPLCHAVLKTLQR WEQVLLKRLEIFGGPPSKYISTHPLDETAASGPAILRHKALFEPSNTPFRSSHHSALPVK RLWQYLVKQEEVQETFIRNIFTKKRNQNESVEDLNENDKCSGMEEPSCNQSEADLGYPGG KARIIHKDSDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDDTEAEAKG DDFLVIQARDDFNTLHGTTPYTHSSLGTPINMPWLGGLQTGRGAAVLIKRNINNVRRMTS HPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGALR LWQTNTTGNTPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTDNRNVCLWDTLVNPMNS LVHAFSCHESGATVLSLAPRQQLLITGGRKGWISVLELPHRHQRQSFQAHDSPVKALAVD PTEGSFISGSAEGNIKVWSLSTQCLLHQFPNEHARQSLFRNLGTGVMQIEVGPANHIFSC GADGTMKMRILPDRFSVNNGNLKNDVKFII NT seq 9093 nt NT seq  +upstreamnt  +downstreamnt atgaatcttcaccaagtccttactggggccgtcaacccaggggacaattgtttttctgta ggtagcataaacaaccaaccattcacggcatatgcctctggctgtgacgttgtgattttg ggcagtgactttgaaaggctacagatcatcccaggagcgaagcatgggaacatccaagtg ggctgtgtggacagctcactacagggaggccaggttgcagcttcctatggaagtattgtc tgtgtctttgagccggttcagctcatgaaccagaaggacaggacatcagcagaactgagc taccagtggcagaagagtggacagtttgttttgcagtctatagtgcgtaacctggcctgg gaccccacaggcactcgtctcttaactgggtccgctagcctgcagctgtggtccaatatc agcgatggttttgatgaggcaggggaacagacagacatgacaattggtgaccctcagtgt ccctggaggtgtatctggcactgcaaaaccgcctccccaattcagctcatgaagttctct ccagatggagaattctttgctactgccggacaggatgactgtctggtcaaagtgtggtac ggcacgagcaaatggcagtctggcgtgaccaagctgttcaccccaccggagcacaacgct cagggcgagctcgacttctcttttgtctacctggcacacccacgcactgtaacaggcttc tcctggaggaagaccagcaagtacatgccacggggttcagtgtgcaatgttctactgaca tgctgtaaggacagtgtgtgtcgcctgtgggccgagaccctgcttcccagtgacagcttg ctgtccggacacacgctcagtcacgttaataataacggacagagcagcgactcactgaaa tcgtcaagcagcaagaagactccctctcgtatcaaaacacaggacaggaattccctggag ttgaatctgcaggagtcgtggagagcccccttgagaggtgtggcccagccctccctaacc ggccgcctcccgacccagcagaacagtcaccacaaccacaagaccaacagcgtgccccat gccaactctctctgccacttccacatcgctgccagcatcaaccctgctacagatatcccc ctgctgccctctatcacgtcgctgtgtgggggagatgacgaggagcctggcgggcccttc accgtgcactggctcaataacaaggagctgcttctcaccctggccatggaggtgttcctg cagcagctcagaggcagtgtggagcagaaccactcggaaaactcccaggaggagcttgac tatgaggaggtagaagaggcttctaggcgagcggcagagggaggacccgatgtggcgtcc acccagctgcctgctgcagcggtggagcaccaggtagaggtgctactggaggactggaac agaggggcagacatgctgttcagtatccaccccatggatggctctctgctggtgtggcat gtggactggctggatgaataccagcccggcatgttccggcaggtccaggtgtcctttgtg tcccggattcctgtggccttccccacgggcgacgccaactccctgagccgcagcgtggtc atgtacgcctgtaacaagaacgtggacctagccatccaacatggccgccagcggcctgcc ggcctgccacattcctcgtcggtgctgattccctacggccagagcaaggcgacctcctac tccagcagcctccgcctcagcatcttcacccccaacgtgctcatgatctccacgcactcc gatggctccctcaaccagtgggcggtcagctttgcagaggagtcggccttctccactgtg ctcagcgtgtcccacaagtcacgctactgcggccaccgcttccacctcaacgacctggcc tgccactccctgctgcccctgttgctcaccacctcacaccacaatgctctgcgcaccccc gatgtggacagtgtccccgccccctcgaccaccctttctcaaccctttgggggcgggccc agccgggtgtccctgggcgctgtgtcgcaggaccccaacgccatctacagcgagctcatt ctgtggagggtggatccagtgggacctctgtccttctctggaggggtgtctgagctggcc aggatcaactctctccactcctccgccttctccaatgtagcctggctgcccacacttatc cccagcaactgccttggtgtctactgcaactctcccagtgcctgcttcgtggccagtgac ggtcactcgctgaggctttatcaggctgttattgaagccaagaaactactcagtgagctc tccaacccagatatttcaaaatatgtcggaaaagtttttaacatcatcagccagcaatcg actgctaaaccaggttgtatcatcgagctagatgccattactgacttccagggaaaggag actcagctgctgcatgtgtttgaagaggatctaattctgggcagtgagcggagagaagcc actcaggaagctcccgctatagagactgcctccagccagccaggcttctccgcccgcttc ttcctggtggtggtagagttcacccagactggcaggtctttcctgcatatgtggcacctg caactggcagctggccaaatcactatggacgagaccggcgctccgcctgaaaaggagaat atgacctcgtcgccaataaacagctcctttagctttgagacgttcagctccccctcggcc cagaagaacaagccttgcacgtccaacctgcagagtgccagtcgcctcaccctggccact cacaggttgtacagccaggagctagctcttccagatggtgttgaggtgatcagtgtcacg ccctccgcaggtcatctgagcgcgtcctccctgcagccggcaggtggcgctccctatctc ctggccacttcctgttcagacgggaaggtgaggttctggaggtgcagggtggctgcagtg gagccagacaccaaggagctgacatacacctgggaggaatggcctctattggtggaggag gggctgggcaacagcagtgccgtgaccgtgtcaggcagaccagtcacagtcagctgttgt cacaccagccgcattgcagtggcctaccgacacaaccctagccctcacctgagccctaac cacctgagccctaaccctcagcagggtgtcagggaaccactggtccatgtagggttattc cagtgtgagtccacaggtggctcccactgggtgctagagcagaccctcgtcctggatgcc tccactcccactggtaacaacaacaataacatggagagtggtgtcaaggacctgaatgtg gagaataataacctggacatctatctgcccaatgacgactgcctggggacctctggtaag agtctggtccacctggactgggtctccagggaggacggctcccacattcttactgtgggg attggttccaaactctacatgtatggcctgctctctggcaaacctcctgaactgggcctg tctgagggccccagggagcagagctcttcccgcctggtcctcctgcgctccgtggacctg gtctcctccgtggaaggctccctgcccatccccgtctccctgtcctgggtgagagacggc atcctggtggtgggcatggactgtgagatgcacgtgtactcccagtggcagcccccggcc ctggccaagtccacggcctcgaacaccaccaccacagacatgggcagcgtgtcatctctc ctggctgcaatgaaacagagccatgaggagggcctgaaccccactcctcccaagaagagc ttgaccaggtccatgaccagcctggcccagaagctgagtgggaagaggacagtgtacgac ctgcctgcggagatggaggactacgggctgtttgaggcggcacaccacctgttccccacc ctgccccagtaccacccggtacagctgctggagctcatggacctggggaaggtccggcgg gccaaggccatcctctcccacctcgtcaaatgcattgccggggagattgtggccctcaaa gacaacggcaccaaccaagacaagcgtctccgctcgcgcaccatcagcgccggcggcagc acctccagagaccccaagctcttcagcaagggcgagagctcggactacacagagattgac tccatccctcccctgcccctgtatgcgctgctggcggccgacgaggactgctcccccaag cccaaggacaaggtggtcagcttgagtggagacagtggccacgggtccagtcagacggac gcctacgatgagctcttccagagcagcggggtgggtgtggacgacctggagcatatggac agcgaccaggaggacggcggtgctaaggtcatagacctgtctcaatatagccccaccttc tttgggccagagcacgcccaggttctgtccagccacctgctccactccagcctaccgggc ctgacccgcatggagcagatgtccctcatggccctggctgacacaatcgccaccacaagc actgacatccgggagagccagagcaggggtaaaggtggagaaactttggatgagtgcggt ctgaagttcctgttggctgtgaggctccatacgttcctgctgaccaccctgcctcctgcc catcgcgctcagctgcttcgccaaggtctgtccacctgtcactacgcctgggccttccac tccgaggctgaggacgagctgctccacatgttacctgccttgcagaaaggagaccccacc tggcccgagctccgcgccatgggcatgggctggtggctcaggagcaccaataaactccgg aggtgtatagaaaaagtcgcaaaagcgtcttttcaaaggcagaacgatcctctggacgcc gccatcttctatctcgctatgaaaaagaaagcggtggtctggggactgtacaggtctcag aagaatgctaaaatgactacgttcttcagcaacaacttcggtgaggaaaggtggaggagg gctgccttgaagaacgccttctctctgctggggaagcagcgcttccagcactctgcagcc ttctttcttttggcaggctccctcaaggacgctgtggaggtttgcctggagaagatgcag gacctgcagctggccctggtgatctcccggctctatgagtccgagtttgagacgtcctcc acctacaaacgcatcctgcagaggcacgtgctgggccaagaccgccagctccccgcccac caggaccccttcctgcgtagcacggcttactgggtgctggaggactacagccgggccctg gatactctgttggagcagcctgctgccccaaacctagcgtcctctactcaggctggccac acaactcaaccaggtagtacctcgtccacgtccctctgtagcccggaggtcttcaacttc tacacctacctccgcacacatcccttactgctgcgccgccattttggctcgtctgagaag accagggtgggtctgacagcggagggtcgcatggcaaactcaatcagcctggtggagagg aggctgttcttcaccgcagcctacgctcacctgcaggccggctgccccatgctggccctg gaggtcctctccaaaatgcccaaagtcgtcaaaagatccaagctcccccaggacgatacc accaaccccgacctgagcgagacgaaaaaggaacaggcgtcagatttggactggtctcag cccgcgttgaacggcttcgagtctgtgtcagacagcttgtccaatagccaatcggactct gtgctgagttttgactggggccagccctctgtgtcggttcaggatgaagccctggagttg aaatgggacagcgacaaggaggaggaggaagaggaggaggaggacgacgacgaaccacag ggcttggccatgaagagtgccgacaacaccagtagcgtctttcaagacgccatctctcca ttgacggagacgctgctggacgagggtgacttcctcatgccctctgaggacatcctggcc gctcaactcaaattcagcgcctgcctaaagatcctgaccacggagctgcggactctgtcc acgggttacgagctggacggggggaagctccgttaccagctgtgccagtggctggagagg gaggtggtggccctgcagaggtgctgcagctacaagccctgcctgccagagctggccctg ggaatggcagggccgggtggagaggaggaggcccaggcccaccctggtgaggctcagcgc acccgcagacactggctccagagcaaccagcctctcctgcgcatgttcctcagctactgc agcttacacggctcccacggaggaggcctggcctcggtgcgcatggaactcatcctgctg cttcaggagtcccaacaggatgacggtgtccagtcagccgtcgccccctacctgcaccac gcctccattcctctcctgctggcctgcactgccagtgccaagacagttgtggccaacccc atcgtccatctgaccaacctcacccacgacatcctgcacaccatcaacgcactggactcc ccgccacacccagacgtcgtcaacaacgagatctatgtgatgcacacactggcagcctcg ctgtccgcctgcatataccagtgtctctgcgacggccacaaccacagccatgtgaaccag ttcactgggatagtgtaccagagtatcctctccttccagcaccactcggtacgcactgtg agcatggaggagactgtactgcccaacacccacccagcacagtggccaggtatcagtacc ctgatccgcctgttgaactctgctggtgaggagagccagccaggcctggccgtgttactg tgtgagatcctgacggccgtcttcctcagcctgtttgtgcacggcctggccacccactcc agcaacgagctgttccgcatcgtggcccacccgctcaacagcaagctgtgggtggctgtg ttcggagggggggcgcgtacccccatcacagagaagcccagtaaggccaagtcacctcca gcagccaatgaggagttcgataggaagcccaggcgcttcaagctgctgtcgtcatcgcca cgcagtgcctccagagaggggccagagacccccagcccaaccagccctgtggtggagcaa gagacctccatcttcaaagagcactttgtccccccggagctcagcatctgggactacttt atcgcaaagcctttcctccctccgtcagagagcagggtggagtacgactcggaggagagc cagggcagtcaggacgaggatgatgatgatgatgaagacgagtttggagactttgacccc aactctcctagccgagaacattccaatcctaactcctacagttggtgtctgatgcgtctg gccatggtccagctggttctaggcaacctgaagtcattctaccccatggcaggacacgac ctactagatctacctgtgggctctcctctgtgtcacgcggtgctgaagaccctccagcgg tgggagcaggtgttgctgaagaggctggagatcttcggggggccgccctccaagtacatc tccacacaccctctggacgagacggctgcctcgggccccgccatcctcagacacaaagcc ctgtttgagccctccaacacacccttcaggtccagtcaccactctgccctgcctgtgaag aggctgtggcagtacctggtcaaacaggaagaggtgcaggaaacgttcatccgcaatatt ttcaccaagaaacgaaaccaaaacgagtcggttgaggacctcaatgaaaatgacaaatgt tcagggatggaggagcctagctgtaaccagagtgaggcagatctgggctaccccggaggc aaggcccggatcatccacaaggactcggacatcattaccgccttcgccatcaacaaggct aatcggaactgcttagtcatggcctccactcatgacatccaggagctggacgtgtcctcc atcttggccactcagattctgacgtggatcgatgacgatacggaggccgaggccaaaggt gatgacttcctggtgatccaggcccgggacgacttcaacaccctccacggcaccaccccc tatacccacagcagcctagggacgcccatcaacatgccctggctcgggggcctgcagacg gggagaggcgctgccgtgctcatcaaaaggaacatcaacaacgtgagaaggatgacctcc cacccaaccttgccttactacttaacaggagcgcaggacggaagtgtccggatgtttgag tggggccactctcagcagatcatctgcttccgaagtccaggcaattccagagtcacacgg atacgattcaaccaccaaggaaacaagtttggtatcgttgacgctgacggagccctacgt ctatggcagaccaatacgactgggaacacccctaaaccctacctgacattgcagtgccat aataagacagctcatgactttgtgttcgtgggctcatcctccctcatagccacagcaggg ctgtcaacagacaacaggaatgtgtgtctttgggatacattggtgaatccaatgaacagt ctagtacacgcctttagttgtcatgagtcgggggccacggtgctgtcgctggcccccagg cagcagctgctgatcacaggtggtaggaagggctggatcagcgtgctggagctcccccac aggcaccagcgccagagcttccaggcccacgactcccctgtcaaggccctggctgtggac cccaccgagggcagcttcatcagcggctctgccgagggcaacatcaaggtgtggagcctg tccacgcagtgcttactgcatcagttccccaacgagcacgctcgccagtccctgttccgg aatctgggcacgggcgtgatgcagatcgaggtgggcccggccaaccacatcttttcgtgt ggcgccgacggtaccatgaagatgaggattctccctgaccgcttcagcgtcaacaatggc aacctgaagaacgacgtcaagttcatcatttag

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