Oncorhynchus nerka (sockeye salmon): 115111283
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Entry
115111283 CDS
T07952
Symbol
cps1
Name
(RefSeq) carbamoyl-phosphate synthase [ammonia], mitochondrial
KO
K01948
carbamoyl-phosphate synthase (ammonia) [EC:
6.3.4.16
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00220
Arginine biosynthesis
one00250
Alanine, aspartate and glutamate metabolism
one00910
Nitrogen metabolism
one01100
Metabolic pathways
one01200
Carbon metabolism
one01230
Biosynthesis of amino acids
Module
one_M00029
Urea cycle
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
115111283 (cps1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
115111283 (cps1)
00220 Arginine biosynthesis
115111283 (cps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115111283 (cps1)
Enzymes [BR:
one01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.16 carbamoyl-phosphate synthase (ammonia)
115111283 (cps1)
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
115111283 (cps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
Peptidase_C26
Motif
Other DBs
NCBI-GeneID:
115111283
NCBI-ProteinID:
XP_029493053
LinkDB
All DBs
Position
LG3:complement(46730761..46817964)
Genome browser
AA seq
1518 aa
AA seq
DB search
MTKILTACNVVKSLRQGWLAARRSSNPACLRSARLFSVKAQIAHLVLEDGTRMKGFSFGD
ERSAAGELVFNTGLVGYPEALTDPSYRGQILTLTYPIVGNYGVPNTQELDELGLRRNIES
DRIQVSGLLVQDYSHEYSHWNSVKSLGQWLQEEKVPALFGVDTRMLTKIIRDKGTVLGKI
EFEGHPIEISDPNQQNILAEVSTKETRVFGKGNPIKVVAVDCGIKHNIIRLLVKRGAEVH
LVPWNQDLMSLEYDGLFISNGPGDPSLAGDLIQNVRKVLESDRPQPVFGICMGNQITALA
AGAQSYKLPMGNRGQNQPVLNVMTGQAFITAQNHGYGIDSTSLPPGWSPLFVNANDGTNE
GIMHDTKPVFTAQFHPEAKGGPTDTEFLFDVFISLIKNGKEANIVSVMPKKPAIPPRTQV
SKVLVLGSGGLSIGQAGEFDYSGSQAVKAMKEENVRTVLMNPNIASVQTNEVGTKQADSV
YFLPVTPQFVTEVIKTERPDGILLSMGGQTALNCGVELFQSGVLQKYGVKVLGTPVESIM
ATEDRQLFADKLNEINEKIAPSFAVETVADALKAADQIGYPVMLRSAYSLGGLGSGFCAN
KDKLEETARKALAMSCQILVEKSLMGWKEVEYEVVRDIANNCVTVCNMENFDPLGIHTGD
SIVVAPSQTLSNEEYHMLRETAIKVVRHLGIVGECNIQYALHPGSLEYCIIEVNARLSRS
SALASKATGYPLAFVAAKLALGIPLPEIKNTVSEKTTACFEPSLDYIVTKIPRWDLDRFQ
GMSREIGSSMKSVGEVMAVGRTFEESMQKALRMCHPSVDGFMPRLPLNKPWSAQQDLHQE
LAVPSSTRVFSLAKALHSGVTVDHIHHLTAIDKWFLHKLRRITELEQHLSQFNSATLPQT
LLLKAKQDGFSDRQVGQALGSSEGEARVLRLAQNIKPWVKQIDTLAAEYPAVTNYLYCTY
HGQEHDLEFKDQGVMVLGCGPYHIGSSVEFDWCAVSSIRALRQMGMRTVVVNHNPETVST
DFDECDRLYFEELTLERILDITQQEGCTGSIVSVGGQIPNNLAMPLHLNGVKILGTNPQQ
IDRAEERSVFSTILDELGVAQAPWKALSSLEDAFAFANKVGYPCLLRPSYVLSGSAMNVA
YGEEEMRGFLDEATQVSQEHPVVITKFIRGAREVEVDAVAKMGKVLCHAITEHVEDAGVH
SGDATLMLPTQSISQGALEKVKSATRKIAKAFEISGPFNTQFLVKGNDVMVIECNLRASR
SFPFVSKTIGVDFISVATRVMVGEPQDEAALPSLENPIIPVDYVGIKAPMFSWPRLRDAD
PVLRCEMASTGEVACFGPNIYSAFLKAMLSTGFKLPTKGILIGIQHSFRPNFLATAHQLN
EEGFKLFATEATSAWLSVNDVPATPVAWPSQEGGDASLPSIIRLINEGHIDLVINLPNNN
SKFLRDNFLIRRMAVDHGVPLITNYQVVKLFAEAIKYASELDTTSLFHYRQRDADRQRDA
DLEKEADRLRDAAAGLQS
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatattgacagcctgcaacgtcgtcaaatcactgaggcaaggatggctcgca
gccagaagaagcagcaaccctgcttgtttgaggtctgctagactcttcagtgttaaggcc
cagatagcccacctggtcctggaggatggtacccggatgaagggcttctcctttggggat
gaacgatctgctgctggggagctggtcttcaacactggcctggtggggtacccagaggct
ttgactgaccccagctacagaggtcaaatcctgaccctgacctaccctatagtggggaac
tacggcgttccaaacactcaggagctggatgagctgggcctgaggaggaacattgagtca
gaccgtatacaggtatctggactcttggtgcaggattacagtcatgagtacagtcactgg
aactctgtcaagtccctgggacagtggctacaggaggagaaggtccctgcattgtttgga
gtggatactaggatgctgaccaagatcatcagagacaagggtacagtgttggggaagata
gagtttgagggccatccaatagagatatcagaccctaaccagcagaacattttagcagaa
gtctcaacaaaggagaccagagtgtttgggaaaggtaaccccatcaaagtggtggctgtt
gactgtggcatcaagcacaacatcatcaggctgcttgttaagcgtggtgctgaggtccat
ctggtgccctggaaccaggacctgatgagtctggagtacgatggcctgttcatctccaac
ggccctggggatccctctctggcaggagacctcatacagaacgtccgcaaggttctggag
agtgaccggccacagcctgtctttggtatctgtatgggcaaccagatcacagcactggct
gcaggggcccagtcctacaaactgcccatgggtaacagaggtcagaaccagcctgtactc
aacgtgatgacgggtcaggccttcatcacagcccagaaccatggttatggcattgacagc
acctctctaccacctggatggagcccgctgtttgttaacgccaacgacggaaccaacgaa
ggtatcatgcacgacaccaagccagtcttcacggctcagttccacccagaagctaaaggt
ggacctacagacactgagttcctatttgatgtgttcatatccctgataaagaatgggaag
gaggccaacattgtgtcagtcatgcccaagaagcctgctatcccacctaggactcaggtt
tccaaggtgctggtgctggggtctggaggtctgtccattggtcaggctggggagtttgac
tactctggatcacaggccgtcaaagccatgaaggaggagaacgtgaggacggtgctgatg
aatccgaacatagcatcggtgcagaccaacgaggtggggactaaacaggctgactctgtc
tacttcctgcctgtcacgcctcagttcgtcacagaggtcattaagaccgaacgacctgac
ggaatccttctgtctatgggaggacagaccgctctaaactgtggagtggagctgttccag
agtggggtactgcagaagtatggggtgaaggtgttggggacccctgtagagtccattatg
gctactgaagacagacagctgtttgctgacaagctcaacgagatcaatgagaagatcgct
cccagcttcgctgtggagacggtggcagatgccctgaaggcagcggatcagataggctac
cctgtcatgctacgttctgcctattccctgggcggactgggctcaggattctgtgccaac
aaggacaagctggaggagaccgctcggaaggccctggcgatgagctgtcagatccttgtg
gagaagtctctgatgggttggaaagaggtggagtatgaagtagtcagggacatcgctaat
aactgtgtcactgtctgcaacatggagaactttgaccccctcggcattcacacaggtgac
tctattgtggtggcccccagccagactctgtccaatgaggagtaccacatgctgcgtgag
acggccatcaaggtagtgcgtcacctgggcatcgtgggggagtgtaacatccagtacgcc
cttcaccctggctctctagagtactgcatcatagaggtcaacgctcgcctctcacgcagc
tctgccctcgcatccaaggccaccgggtacccccttgcgtttgttgcagccaagctggct
ttgggcatccctctgccggagatcaagaacactgtgtcagagaaaaccacagcctgtttc
gaaccaagcctggattacattgtcacgaagatccctcgctgggaccttgaccgattccag
ggcatgtcccgagaaataggcagctccatgaagagtgttggagaggtgatggcggttggg
cgtacgtttgaggagagcatgcagaaggctctgagaatgtgccacccctctgtggatggg
ttcatgccccgcctgcccctcaacaagccttggtctgctcagcaggacctacaccaggag
ttggctgtaccctccagcacacgggttttctccctggccaaggcccttcacagtggtgtg
actgtagaccacatccaccatctcactgccatagacaagtggttcctacacaagctacga
cgcatcacagagttggagcagcacctgagccagttcaacagtgcaacattaccccagacc
ctgctgctgaaggctaaacaggacggcttctcagaccgccaggtgggccaggcccttggt
tccagcgagggggaggccagagtgttgaggctggctcagaacattaaaccctgggtgaaa
cagattgacacccttgctgcagagtaccctgctgtgaccaactacctgtactgtacctac
catggacaggaacatgacttggagttcaaggaccagggtgtcatggtgctgggatgtggt
ccctatcacattgggagcagtgtggagtttgactggtgtgcagtgtccagtatccgagcc
ctgcgtcagatgggcatgcggacagtggtggtaaaccacaaccctgagactgtcagcacg
gactttgacgaatgtgaccgcctgtactttgaagagttgactctggaacgcattctggac
atcacacagcaagagggctgtacaggcagcatcgtgtctgtagggggtcagatccccaat
aacctggccatgcctctgcacctgaacggggtcaagatcctaggaaccaacccccagcag
atcgaccgagccgaggagaggtcagtgttctccaccatcctggatgaactgggggtggcc
caggccccgtggaaggccctcagctcactggaagatgcctttgcctttgccaataaagtg
ggctacccctgtctcctacgcccctcttacgtactcagtggctcagcaatgaacgtggca
tacggtgaagaagagatgaggggcttcttggacgaggctactcaggtgtctcaggagcat
ccagtggtcatcaccaagttcatccgtggagccagagaggtggaggtggatgcagtggcc
aagatgggaaaagtgctgtgccatgctataacagagcatgtggaggatgctggggtccac
tctggagatgccaccctcatgctacctacccagagcatcagccagggggccctagagaag
gtgaagagtgccacacggaaaattgctaaggcgtttgagatctctggtccattcaatact
cagttcctagtgaaaggcaacgatgtcatggtgatagagtgtaacctgcgagcatcacgc
tccttccccttcgtatctaagaccatcggtgtggacttcattagtgtggctacacgggtc
atggtgggtgaaccccaggatgaggctgctctgccttctctggagaaccccatcatcccc
gttgactatgtgggaatcaaggctcctatgttctcctggcctcgccttcgtgatgccgac
ccagtcctgcgctgtgaaatggcttccacaggagaggtggcttgttttggaccaaacatc
tactctgccttcctcaaggctatgctatctactggcttcaagctgcctacaaaaggaatc
ctcatcgggatccagcattcgttccggcccaacttcttagccacagcacaccagctgaat
gaagaaggctttaagctctttgctacagaggccacctcggcctggctctctgtcaatgac
gtgcccgccacccctgtggcatggcccagccaggagggaggagatgccagcttgcccagt
attatcaggctgatcaatgagggccacattgacctggtgataaaccttcccaacaacaac
agcaagttcctcagggacaatttcctgatccgcaggatggctgtggaccacggggtgcct
ctcatcaccaactaccaggtggtcaagctgtttgctgaggccataaagtatgccagcgag
ttggacaccaccagcctgttccactaccgccaacgggacgctgaccgccaacgggacgct
gacctcgaaaaggaagctgaccgccttagggacgctgccgccggactgcagagctag
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integrated database retrieval system
