Oncorhynchus nerka (sockeye salmon): 115111320
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Entry
115111320 CDS
T07952
Name
(RefSeq) rap guanine nucleotide exchange factor 1-like isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115111320
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
115111320
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
115111320
NCBI-ProteinID:
XP_029493110
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Position
LG27:7173797..7231010
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AA seq
1072 aa
AA seq
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MSGKIESKPDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKVSKPPLEHGVKTAEKPANKSL
SRLEEQEKDVVSALRYFKTIIDKMAVDKKVLEMLPGSASKVLEAILPLVQVDARIQHSSG
VSSCLNRVYQSLGNLIRWSDQVMLEGVNLEDKETIVTVTTVIKAVLDGVKELVKLTIEKQ
EHPSPTSPVKPVPVATPPESAAEPPANEKESLDKSSATSQSMEALTEPTGEEEEEEVVAP
PKPPLPGLKMAEHNPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPMGIGLHKQEYEV
DALQRRFSGGSHYYGGESPRISPCNSMGKLSKSDGQLSWTMDSGQCSRNTSSEALDTTDH
YDPDYDFLHQDLSSLEQMTPVPVGACLSPLPESHSESSCPGPGPPLAQLHFSSLQGCSVT
SALPPPALPEKKRRGGACSGFSDGSYSGSSWCVSFERHPSQYDNLMEEDLPPVPPFPLFT
PDILPLCHTAGGFVSEFSGSETTDVPQSPPPLPEKKSRHILKYMQFVEDYSEPQPSVFYQ
MPQSKSIYEQRNKHFQEVYGFNDSFSSSDSVHEPLPPPALPPKQRQLSESANEEGGEGEY
VNLYTSSQANGDGLSRRDSSAIDDSLEDTASENPLCNNKDMSDDRRRQKSSEDGRSSEET
DELSLIDHMEIMSRLTLKQENDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRT
FITPEDLIKKLHYRYTRFCHCPDTFKKKVSKNTFFVLVRVVDELCLVEMTEDILMQLMDL
VFRLVCNGELSLARVLRTNILDKVEQRKLLRYTYSLKPLAARGVAARPGTLHDFRSHEIA
DQLTLLDAELFYKIEIPEVLLWAKEQNEEKSANLTQFTEHFNNMSYWVRSIIILQEKAQD
REKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKTTSEGLEEYCTLIDSSS
SFRVYRAALADVEPPCIPYLGLILQDLTFVHLGNPDQINGKVNFSKRWQQFNILDSMRRF
QQVHYDLKHNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagtaaaccagactcccaacgctcccatttgtcttccttcacc
atgaagcttatggacaagttccactctcccaaaatcaaaaggactccctcaaagaaagtc
agtaagccgcctttagaacatggcgtcaagactgcggagaaacctgctaacaagagtctg
agtcggttagaggagcaagagaaagacgtggtcagtgccttgcgttacttcaagaccatc
attgacaagatggcggtggacaagaaggtgctggagatgttaccaggctctgccagtaag
gtcctggaggccatcctgcctttagtccaagtggatgcaaggatccagcacagctcgggg
gtgtcctcctgtctgaaccgtgtgtaccagagtctgggcaatctcatccgttggtctgac
caagtcatgctggagggggtcaacctggaagataaagaaaccatcgttaccgtcaccact
gtgatcaaggcagtgcttgatggtgttaaggagctagtgaaactgaccatagagaaacag
gagcatccttcccccacgtctcctgtcaaaccagtgccagtggccaccccacccgagagt
gctgctgagcctcctgccaatgagaaggagagtctggacaagagctcagccacgtcccaa
tctatggaagccctgactgaacccactggagaggaggaggaggaagaggtggtggcccca
ccaaaaccccctctccctggcctcaagatggctgaacacaatcctcctgctctgcctcca
aagaagcgccagtctgccccctcacccacccgggtggcagtagtggcccccatgagccgt
gccaccagtggctccagtcttcccatgggcatcggcctccacaaacaggagtacgaggtg
gatgccctgcagcggcgcttctctgggggcagtcattactatggaggggagtcgccgcgc
atatccccctgcaatagcatgggcaagctgagcaagtccgacgggcagctgtcctggaca
atggacagtgggcagtgctcacgcaacaccagcagtgaggctctggacaccacagaccac
tacgacccggactacgacttcctgcaccaggacctgtccagcttggagcagatgactcct
gtgccagtgggagcgtgcctcagccccctgcctgagtcccacagcgagtcttcctgccct
ggccccggtccgccgctggcacaactccacttcagctccctccagggctgttccgtgact
tccgccctgccgccccctgccctgccagaaaagaagcgccgaggtggcgcctgctcaggt
ttttccgacggctcctactcgggctcatcctggtgcgtttcctttgagcgccacccatcc
cagtacgacaacctcatggaggaggacctaccgcctgtgcccccctttcccctgttcacg
cccgacatcttgcccctgtgccacaccgccggggggtttgtgtctgagttcagcggaagc
gagacgacagacgtacctcagagtccaccgccactccctgagaagaagagccgtcacatt
ctgaaatacatgcagtttgtggaagactactcggagccccagccctcagttttctaccag
atgccacagagcaagagcatctatgagcaacgcaacaagcacttccaggaagtctacggc
ttcaatgactcgtttagcagcagcgactctgtccacgagcccctcccacccccggcactg
ccacccaaacagaggcagctgagcgaaagcgctaacgaggaaggcggggagggagagtac
gttaatctgtacacatccagccaagccaacggagatgggctctcccgccgagactcgtct
gccatagatgactcactggaggacactgcctcagagaacccactgtgcaataacaaggac
atgtccgatgaccgccgaagacaaaagtcgtctgaagatgggcggagtagcgaggagacg
gatgagctttccctcatcgatcacatggagatcatgtcccggttaacactaaagcaggag
aacgatgacggtccagatgtccgagccggatcgggggatattttattagtccacgccaca
gaaacggaccgcaaagatcttgtcttgtactgtgaggctttcctgacgacgtacagaacg
ttcataaccccagaggaccttatcaaaaagctgcactacagatacaccaggttttgtcac
tgcccagataccttcaagaagaaagtcagcaaaaacaccttctttgttcttgtccgtgtg
gtggacgagctgtgtctggtggagatgacggaggacatcctgatgcagctgatggacttg
gtgttcaggctggtgtgtaacggtgagctgagcctggcccgcgtcctccgcacaaacatc
ctggacaaggtggagcagaggaagctgctgcgctacacctactcgctcaaaccactggcc
gcaagaggtgtcgccgccagacctgggaccctgcacgacttccgaagtcatgagatcgcc
gaccagctaactctcctggatgcagagctcttctacaaaattgagatccctgaggtgttg
ctttgggctaaggagcagaacgaggagaagagtgccaacctcacacagttcacagagcac
tttaacaacatgtcctactgggtacggtccataatcattctgcaagagaaagcccaggac
cgagaaaagctcctcctcaaatttatcaaaataatgaagcacttacggaagctaaataat
ttcaactcatatttggcaatattatctgcgttggattcagctcccatccgaagactggag
tggcagaaaacaacctcagagggcctagaagaatactgcacgttaatagacagttcctcg
tcgttccgggtctaccgagcggcactggcagacgtggagcccccatgtataccatatctg
ggtcttatcctccaggacttgacctttgtccatctgggcaaccctgatcaaatcaacggg
aaggtcaacttctccaagcgctggcagcagttcaacatcctggacagcatgaggcgcttc
cagcaggtgcattatgatctgaaacacaacgacgatattgtctccttcttcaacgacttc
agcgaccacctggcagaggaggctctgtgggagctgtctttgaagatcaaacctcggaac
attacgcggcgcaaaacagagcgcgaagaaaagacatag
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