Oncorhynchus nerka (sockeye salmon): 115111340
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Entry
115111340 CDS
T07952
Name
(RefSeq) ARF GTPase-activating protein GIT2-like isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115111340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115111340
Membrane trafficking [BR:
one04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
115111340
Endosome - Golgi transport
Arf GTPase associated proteins
115111340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank
Ank_5
Ank_4
Shugoshin_N
Ank_3
TTRAP
Motif
Other DBs
NCBI-GeneID:
115111340
NCBI-ProteinID:
XP_029493139
LinkDB
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Position
LG27:complement(7911498..7946943)
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AA seq
768 aa
AA seq
DB search
MSKRLRNSELCADCSVPEPRWASVNRGVLICDECCSVHRSLGRHSSQVRHLTHTPWAPTQ
LQMVQMLYNNSANSIWEHSLLDPASVMSGKRKANPQDKVHPNKTEFIKAKYQMLAFVHRM
PCRDDDSFTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQV
FQAELLTVYGADPGAPDTSAKTPIDYARQAGYHDLADRLVEIQYELTDRLAFYLCGRKPD
HKNGQHFIVPQMADRNISLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVW
LATQNHSTLVTDTTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQL
GNSTMSPKENVELILKSVSIRRGSEGLDNDQPDYDSVASDEDTDQEPPSGKDRTKSLDSD
LSDGPVTVQEFLEVKHALSASEAKIKQLMKVNSNLSGELRLMQKKLHSLQSENTSLRRQG
PTTHIYQVPISSGSEYTDPPSSSPSAMKRRQSARASRPMSMSIYETGSGLKPYLPKGETP
YPEEGIPTLQPFLPPHMGRGAFVTSSSLPSFPSTLSWSRDESAQRASKMEKQSSMSDGDY
DNTTNDSELEDSGVGRRGRLRSSGWLGEGSSIPELDDLEAEPDSALPSTEDVIRKTEQIT
KNIQDLLRAAQENKHDSFIPCSERIHVAVMEMAALFPKRPRSETVRGPLRLLTSSAFRLQ
GECQKAVPSEGGPGPDLQLVTQQVIQCAYDIAKAAKQLVTITTKENSN
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgattaaggaatagtgagctatgcgcggattgcagtgtgccggagcctcgt
tgggcttctgtgaacaggggcgtgttgatctgcgacgagtgctgtagtgttcatcggagt
ctgggcagacacagctcccaagtgcgtcacctgactcacacaccatgggctcctacacag
ttacagatggttcagatgttatacaacaacagtgcaaattcgatatgggaacactctcta
ctggacccagcatctgtgatgagtgggaaacgcaaggccaaccctcaggacaaagtacac
ccaaataagacagagttcataaaggccaaataccaaatgctggcttttgtccaccggatg
ccttgtcgagatgacgacagcttcactgccaaggacttaagcaagcaacttcactccagt
gtccgaactggtaacctggaaacatgtctgaggttactctctctgggagcccaggccaac
ttctttcacccagaaaaagggaatacgccgctgcatgtggctgccaaggcaggccaggtg
tttcaggccgagctgctgacagtctacggggccgaccccggcgcccccgacaccagcgcc
aagactcccattgactatgcaaggcaagctggctaccatgacctggctgataggctggtg
gagattcagtatgaacttaccgacagactggctttctatctctgtggaagaaagcctgat
cataaaaatggccaacacttcatcgtcccacagatggccgacaggaacatcagtttagat
ttatcagaactggcaaaggcagccaagaagaaactccagtctctcagtaatcatttgttt
gaggagctggcgatggacgtgtatgacgaggtggacagacgggagacggatgcagtatgg
ctggcgacacagaaccacagcacgctggtgacagacaccaccgtggtgcctttccttccc
gtgaacccagagtactcatcaacacgaaaccagggacggcaaaaacttgcgagattcaat
gcacatgaatttgcaacacttgtcatcgacatattaagtgacgcgaagcgtcgacagctg
ggaaactctacgatgagtcccaaagaaaacgttgaacttatcctaaaaagcgtgagcatc
cggcgcggcagtgagggtctggacaatgatcagccggactacgacagtgtggcctctgac
gaggacactgatcaggagccaccctcgggcaaggaccggaccaagagtctggactcggac
ctgtcagacggacctgtcacggtgcaggagttcctggaggtgaagcacgccctgtctgcc
tcggaggccaagatcaagcagctgatgaaggtcaacagcaacttaagtggcgaactgcga
ctgatgcagaaaaagctgcattctctgcaaagcgagaacacgtctctcaggcgacagggc
ccaaccacccatatctatcaggtccccatcagcagtgggtcagagtacactgaccctcct
tcctccagcccctcggccatgaagcgccggcagtcagcgcgggccagccggcccatgtcc
atgtctatttatgagactggctcgggcctgaagccctacctccccaagggggagaccccc
tacccagaggagggtatccccaccctgcaacccttcctcccacctcatatgggaaggggt
gcttttgtgacctcttcatccctcccctccttcccatccaccctgtcctggtcacgggac
gaaagtgctcaaagggcctccaagatggagaaacagagcagcatgtcagacggtgactat
gacaacacaaccaatgactctgagttggaggactcaggtgtgggcaggagggggaggctt
aggagcagtggctggcttggggagggcagctccatccctgaactggatgatcttgaagcc
gagccagactctgcgctccccagcaccgaggatgtcattcgcaagacggagcagatcacc
aagaacatccaggatctgctccgcgctgcacaggagaacaagcacgacagctttataccc
tgctccgaaagaatacatgtggctgtgatggaaatggctgccctctttcccaagagacca
cgttcggagacagtgcgaggtcccctgcgcctattgacgtccagcgccttccggctccag
ggagagtgtcagaaggcagtgccctcagagggaggtccagggcctgacttgcagctggtc
acccagcaggttatccagtgtgcctatgacatcgccaaggcggccaaacagcttgtcacc
attaccaccaaggagaacagcaactga
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