Oncorhynchus nerka (sockeye salmon): 115111349
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Entry
115111349 CDS
T07952
Symbol
ntrk2
Name
(RefSeq) BDNF/NT-3 growth factors receptor isoform X1
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115111349 (ntrk2)
04020 Calcium signaling pathway
115111349 (ntrk2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115111349 (ntrk2)
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115111349 (ntrk2)
Protein kinases [BR:
one01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
115111349 (ntrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRR_8
Ig_2
LRRCT_2
C2-set_2
LRR_5
ig
LRRNT
Haspin_kinase
BiPBP_C
ICAM_N
V-set
Motif
Other DBs
NCBI-GeneID:
115111349
NCBI-ProteinID:
XP_029493162
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Position
LG27:8185731..8248310
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AA seq
798 aa
AA seq
DB search
MSAFRRGSWVSLLELCWVLMGLWRLGAACPASCSCSGTRIACVDQERGIMAFPVLQSELE
MDNITDIYIANQSSFSSINDKDLHYYRNLTNLTVTNSRLTYVSRLAFQNNLKLQYLNLKD
NNLSSLYWRIFRHLNISNLILSGNPLHCSCENMWMKLWLGEEADAQELRCIEEGGGRKPL
TRLNPPHCVVPMATLSPSKVTVQEGADVVLTCNTSGAPSPELIWNMTPLVSYNEIEASGQ
VSELHLYNLSSLDNNCKITCSAENIVGENESSVFLDILFPPNISKLSDAYSDHHWCIPFS
MSGNPKPDLRWLLNGEPVNEGPYIMTMIHDFSEREFHGCLQLDSPTHINNGPYTLLASNK
YGQDRKTVEAHFMLDPFDGGTVTEPLYYDPTTEDTPLEPPEDRVAVYVVVGIAAVAFMGF
LLMLVILKFGGNSKFGIKGASSVISNDDDSASPLHHVSNGSNTPSSSEMGLDAVIIGMTK
IPVIENPQYFRSNSMLKSDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLSPELEKIL
VAVKTLKEASENARKDFHREAELLTNLQHQHIVTFYGVCVESDPLIMVFEYMKHGDLNKF
LRAHGPDSVMMGDGPTNRPVVLTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE
NLLVKIGDFGMSRDVYSTDYYRVSVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW
EIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRHHIKDIH
SLLLNLAKASPVYLDILG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctttcggaggggtagctgggtgtctctgttggagttgtgttgggtattaatg
ggactgtggaggctcggggccgcctgccctgcgtcctgctcctgcagcgggaccaggatc
gcctgtgtggaccaggagcggggcatcatggctttcccagtgctgcagtctgagctggag
atggacaacatcacggacatatatattgcaaatcagagtagcttctcatccatcaatgac
aaagacctgcattattaccggaacctcacgaatctaactgtgactaacagcaggcttacc
tatgtgtctcggctggctttccagaacaacctcaaactccagtatctgaatctgaaagac
aacaacttgtcatctctttattggaggatatttcgacatttaaacatatcaaatctgatt
ctttcagggaacccactgcactgttcctgtgagaacatgtggatgaagctgtggctggga
gaggaggctgatgctcaggagctcagatgtatagaggagggtggcgggaggaaacctctc
accaggctcaacccccctcactgtgtggttcccatggcgactctgagcccatccaaggtg
acggtgcaggagggtgctgatgtggtgttgacatgcaacacctctggagcgccctctcct
gagctcatctggaacatgaccccactcgtctcctacaatgagattgaggcctcagggcag
gtgtctgagctccatctctataacctctcctcactggacaacaactgtaagatcacctgc
agcgctgagaacattgtgggcgagaatgagtcctcagtcttcctcgacatcctctttccc
cctaacatcagtaaattgagtgatgcctactcagaccaccactggtgcatcccattcagt
atgtctgggaacccaaaacctgatctccgctggctgttaaatggggagccggtaaatgag
ggaccctacatcatgactatgatccatgacttctctgagagggagttccacggctgcctg
cagctggacagccccacacacatcaacaacggaccgtacaccctgctggccagcaacaag
tacggacaagaccgcaagaccgtcgaggctcacttcatgcttgacccctttgatggagga
acagtgacagaaccactttactatgacccaactacagaggacacacctctagagccacca
gaagacagagttgctgtatatgtggtcgtagggattgcagcagtagccttcatgggtttt
ctattgatgctggtcatcttgaaattcgggggaaactcaaagtttggaatcaaaggtgcg
tcatcagtgatcagtaatgatgacgactcggcttctcctctccaccacgtgtccaatggc
agtaacactccgtcctcctctgagatgggcctagacgcagtcatcatcggcatgaccaag
atccccgttatcgagaaccctcagtacttccgcagcaacagcatgctcaaatcagacacc
tttgtccagcacatcaagagacacaacatagtgctgaagagggagttgggagagggggcg
tttgggaaggttttcctggctgagtgctataacctgtctcctgagctcgaaaagatcctg
gtagccgtcaagaccctgaaagaggctagtgagaatgcaaggaaagacttccaccgggag
gccgagttactgaccaacctgcagcaccagcacattgtcacgttctacggtgtgtgtgtg
gagagcgaccccctcatcatggtttttgagtatatgaagcacggggacctcaacaagttc
ctcagggctcacggtcccgactccgtgatgatgggtgacggtccgaccaataggcccgtg
gttttgacccagtcccagatgctgcacatcgcccagcagattgctgcaggcatggtctac
ctggcctcccagcactttgtccaccgagacctggccacacgtaactgtctggtgggagag
aacctgctggtgaagatcggtgacttcggcatgtcccgagatgtgtacagcacggactac
tacagggtaagtgtggggggtcacaccatgctgcccatccgctggatgcctccagagagc
atcatgtacaggaagttcaccacagagagtgacgtgtggagtctgggcgtggtcctctgg
gagatcttcacctacggcaaacagccctggtaccagctctccaacaacgaggtgattgag
tgtattacacaggggcgtgtcctgcagcggcctcgcacctgtcccaaagaggtgtacgac
ctgatgctggggtgctggcagagggaaccccacatgagacaccacatcaaggatatccac
agcttactgctcaacctagccaaggcctctcctgtctacctggacatccttggctga
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integrated database retrieval system
