KEGG   Oncorhynchus nerka (sockeye salmon): 115111359
Entry
115111359         CDS       T07952                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115111359
   03400 DNA repair and recombination proteins [BR:one03400]
    115111359
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    115111359
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115111359
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N UBA_4 Methyltransf_32
Other DBs
NCBI-GeneID: 115111359
NCBI-ProteinID: XP_029493187
LinkDB
Position
LG27:complement(8669894..8701998)
AA seq 1128 aa
MMTSVVSNPARGTRDRALPTTTHPQKQIQATAEQIRLAQMIYDKNDADFEDKVKQLIEVT
GKTQDECMVALHDCNEDVNRAINFLLESTSDTTTWETVGKKVRGKEGGPSEMKDNREKRG
DREASRSRGVPNRRGRGANRSREVRPEENGFEMCSGDKVADRGRRGRGVAGRGLGGRGRG
RAAGGNRFSSQGMGIFNPADYNANSSGSRQETWEAEGNEGGDGIGGTWRGNLEDWAAEDW
NEDLSETKVFTASAPANHITSGHNVDMGSLLPKTGGVEADLGGMEPPAPVCVGGQSLVFT
NSHHNCARPATHSYASAASGTSYTHGALSSVLGSGFGALSGPKPNLGEVRIPEQLNGPQL
TPRTHQQLVTAGNSSVAKESGPPAVQGSAPISASETKAPRVEKGPVLTSHLDLKMQPEPS
SVLSQLARRQQQAQHSSLPQAEPLSLPPQVPTPPGHYDAGPPPPRDGHSLDHQAPMAEPP
QRQIKTQRRRVPPPSKIPSSAVEMPGSADVSGLNVQFGALDFDSEPSVIDMGHQAEPARE
LAPTAVPQPQSSLFSKPGPVSEPLGSLSSMPPSISDPSFPSLGLPSATPSPSLGLPSAAP
PSTSASRVDNGPVQRMPPHLGYPQSKDTPAAPLTVSHQHWICQNGYGGVRTQGPEDSMSL
ASRTPKPQSPPMSSDSGPVHHVPSPAPTPSYSAPLPSVSSHVTSTYSSGSALSTSSSLTM
TSEESSSLHAFSSSSGPSINAAVSSSNGMMHVPGAPGLSANGNTTLSAAGRTAQPLLNTT
SGKAPPNLAQGLPPLLANQYIMGPGGLLPAYPQIYGYEDLQMLQSRLPMDYYGVAFPGTT
ATMPGRDGLANNPYSGEATKFGRGDSSSPAPPNSLSQGPSAQPQQPPQAQSQGLGQSQAQ
QNQAFLNPPLPPGYGYTGLPYYAGMPGVPNAFQYGPTVFVPPVSAKQPNMGLGNPSSQYH
QQHQPSYGQHAYGTAFDDLSQGHAGEYSKGGYGGSAQSQAKSAGSGPGKAPGLSSSGSSG
GVPDIGASMYSKTQSFDKQGFHAGTPPPFSLPSALGGTGPLNPGGAPGYAPPPFLHILPA
HQQPHSQLLHHHLTQDGQGVPGQRNQSSSMQQKSQGSKSSYGSPYWAN
NT seq 3387 nt   +upstreamnt  +downstreamnt
atgatgacttcagtggtcagcaatccagctcgaggaactcgggacagagcgctgcccact
actacacacccacagaaacagatacaagccacagcagaacagattcggcttgcccagatg
atctatgacaaaaatgatgctgactttgaggataaggtcaaacagctgattgaggtgact
gggaagacccaagatgagtgcatggtggccctccatgactgcaatgaggatgtcaacaga
gccatcaatttcctgctggaaagcacctctgacacaaccacctgggagacagttgggaaa
aaggtgcgagggaaggaggggggtccctcggagatgaaggacaaccgagagaagagagga
gatcgcgaggcaagccggagccgcggagtccccaacaggaggggccgtggagccaaccgc
agcagagaggttcggccagaagagaatgggtttgaaatgtgttctggggataaagttgcc
gaccgtggtcgcagggggaggggcgttgctggcagagggttggggggtcgcggaagggga
agagcagctggtggtaacaggttctcctctcaggggatggggatcttcaaccccgccgat
tacaacgctaactctagcgggtctcgccaggaaacttgggaagcagaggggaacgaaggt
ggagatggtataggaggaacatggagaggcaacttggaagactgggctgcagaagactgg
aatgaggatctgtctgaaaccaaagtgttcactgcctctgctcctgcgaaccacatcaca
tctggacacaatgtggacatgggctcgctgctgcccaagacgggcggtgtggaggcggat
ctgggtggcatggagccccctgcccctgtgtgcgtggggggccagagcctggtgttcacc
aactctcaccacaactgcgctcgccccgccacacacagctatgccagtgctgcctctggc
actagctacacccacggtgccctgtcctcagtccttggctctggatttggggcgctgagt
gggcccaagccgaacctgggtgaggttaggataccagagcagctcaacgggccccagctc
accccgcggacccatcagcagctggtcaccgcgggcaacagcagtgtcgccaaagaatcc
ggtccacctgcagttcaaggctccgcccccatttctgccagcgaaaccaaggccccgaga
gtggagaagggccctgttctaacctctcacttggatctaaagatgcagccggagccttcc
tctgtcctcagccagctggcccggcggcagcagcaggcccagcatagctcccttccccag
gcagagcctctgtctcttcccccccaggtacctactcccccaggccactacgatgccggg
cccccgcctcccagagacggacactccctggaccatcaggctcccatggctgaaccccca
cagaggcagatcaagacccagagacgcagagtacctcctccctcaaagatcccctcatct
gcggtggagatgccaggctcagcagatgtgtctggtcttaacgtgcagtttggggccctg
gactttgactcggagcccagtgtgattgatatgggccaccaggctgagcctgccagggag
ctggcccccacagctgtaccccagccccaaagcagcttgttttccaaacctggaccagtc
agtgagccccttggcagcttgtcatccatgccgccgtcgatatcagaccccagtttcccg
tctctgggtttgcccagtgccacaccatccccctccctgggtctccccagcgccgccccg
ccctccacctcagctagcagagtggacaacggccccgtgcagcggatgcccccccacctt
ggctacccccagagcaaagacacccccgccgcccctctcactgtgagtcaccaacactgg
atttgtcagaatggctatggtggcgtgaggacacagggccctgaggactcgatgtcgttg
gcttctcgaacccctaagccccaatcccctcccatgagcagtgacagtggccccgtccac
catgttccctccccagcccccacaccttcctactctgcccctctgccatctgtcagcagt
catgtgaccagtacatactcgtcaggatctgccctctccactagctcctcccttacgatg
accagtgaggagagcagtagtctccacgccttctcttcctcatctggcccttccatcaat
gctgccgttagcagctccaatggcatgatgcatgtccccggagcacctggtctatccgcc
aatggcaacaccaccctctcagctgccggacgcactgcccaacccctgctgaacaccaca
tctggcaaagccccccctaacttggcccaaggactgccccctctgctggctaatcagtac
attatgggccctggaggcctgctccctgcatacccgcagatctatggatatgaggaccta
cagatgctgcagtctcgtctgcctatggactactatggagttgcattccctggtacaacc
gcaaccatgcctggcagagatgggctagccaacaatccatactcaggtgaagcgaccaag
tttggcagaggggactcgtcttccccagctccccccaacagcctgtctcaaggcccctct
gctcagccccagcagcccccccaggctcagagccaaggtctgggacagagccaggcccag
cagaaccaggccttcctcaatcctcctctgcccccaggctacggctacaccggccttcct
tactacgccggcatgcccggggtgcccaacgccttccagtacggccccaccgtttttgtg
cctccggtctcggccaagcagcccaacatgggcttggggaacccctccagccagtaccac
caacagcatcagcctagctacggccagcacgcgtatggaacagcttttgacgacctgtct
cagggccacgcgggggagtacagtaagggagggtacggaggctctgcccagtcacaggcc
aaatcagctggcagcggcccagggaaagctccaggtttgtctagctcaggcagcagtgga
ggggtgcccgatattggtgcttcaatgtacagcaagacacagtcttttgataagcagggc
ttccacgcgggaacgccccctcccttcagcctgccatctgcgctggggggcacgggccct
ctgaaccccgggggtgcccccggttacgccccgccacccttcctccacattctgcctgcc
caccagcagccacactctcagttgctacaccaccacctcacccaagacggacagggtgtt
ccgggtcagcgcaatcagtccagcagcatgcagcagaagagccagggcagtaagtccagt
tatggaagcccttactgggccaactga

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