Oncorhynchus nerka (sockeye salmon): 115111368
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Entry
115111368 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115111368
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115111368
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115111368
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
115111368
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
115111368
NCBI-ProteinID:
XP_029493215
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All DBs
Position
LG27:complement(8905722..8938268)
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AA seq
471 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRILNERQQQTCEAEALAR
VYSSSLTNGLSTLNHEIGGTYANGHVIELPKGQVNGGATGGYYHGMDSTQPSPDQSGLDL
AGIKHIKQEPVYDLTPVANLFNYSTYQDSQLAHSNVSMGELDRIAQNIIKSHLETCXYTA
DELQQLAWQTHSYDDIKMYQSKTRDVLWQQCAIQITHSIQYVVEFAKRISGFMELCQNDQ
ILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLCS
LQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLIG
RIPMLSAVCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNAAITMPK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagttataccgtgcaaaatctgtggagacaaatcatcaggaatc
cactatggagtcatcacgtgtgagggctgcaaagggttcttcagacgaagtcagcagaac
aacgctgcatactcatgccctcgccagaggaactgtctgatcgacaggaccaaccgaaac
cgctgccagcactgccgtttacagaagtgtcttgcactcggaatgtccagagatgcggtg
aagtttggccgcatgtccaagaagcagcgtgacagcctgtacgccgaggtacagaagcac
cagcagcggatcctgaatgagcggcagcagcagacgtgtgaggcagaggccctggcgcgc
gtctactcctccagcctgaccaacggcctcagcacgctcaaccacgagatcggaggcacc
tacgccaacggccacgtcatcgagctccccaagggccaggtgaacggtggtgccacgggt
ggctactaccatggtatggactccacccagccctccccggaccagtcaggcctggacttg
gcgggcattaagcacatcaagcaggagccggtgtacgacctgacccctgtagctaacctg
ttcaactatagcacctaccaggacagtcagctggcgcacagcaatgtcagcatgggagag
ctagatcgtatcgcccagaacattataaagtctcacctggagacctgtncatacacagca
gatgagctgcagcagttggcctggcaaacacactcctacgatgacatcaagatgtaccag
agcaaaacacgagacgtgctgtggcagcagtgtgccatccagatcacccattccatccag
tatgtggtggagtttgccaagcgcatctcaggcttcatggagctttgccagaacgaccag
atcctcctgctcaagtcaggttgtctggaggtggtcctggttagaatgtgtcgggcgttt
aacccactcaacaacacagtgctgtttgaggggaagtacgggggcatgcagatgttcaaa
gcactaggctgtgacgacctggtcagcgctgtgtttgactttgccaagagtctgtgctct
ctgcagctcactgaggaggagatcgctctgttctctgcagcagtgctcatctccacagac
cgtccatggctgatggaacccaggaaggtgcaaaagctccaggagaagatctactttgcg
ctgcagcacatcatgcagaagaaccacatggacgaggacgcgctggctaagctgattggt
cggatacccatgctgtcggccgtgtgtactctccacaccgaggagctgcaggccttccag
cagcttcaccctgagacggtgaacgtgctcttccccccgctctacaaggagctgttcaat
cccgaccccaatgcagcgatcaccatgcccaagtga
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