Oncorhynchus nerka (sockeye salmon): 115111392
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Entry
115111392 CDS
T07952
Symbol
poli
Name
(RefSeq) DNA polymerase iota
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115111392 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115111392 (poli)
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115111392 (poli)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
115111392 (poli)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_C
IMS_HHH_1
IMS_HHH
Cdd1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
115111392
NCBI-ProteinID:
XP_029493258
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All DBs
Position
LG27:10425130..10433799
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AA seq
759 aa
AA seq
DB search
MDVGGEDIDEDETDWNSICSDFVQPPHVVIHGGKYFSKVPAPPVQRVILHFDLDCFYAQV
EMIRNPALRNVPLGIQQKYIIVTCNYVARDLGVTKLMLVTDAKEKCPQLVLVKGEDLTHY
RETSYKVTELLMSFCPLVERLGFDENFMDITEMVERRMEQTPESAHYSYEGHIYNLDTSD
AKVMVHPRLAVGSHIAAELRAEIHSKLGLTGCAGIATSKLLAKLVAGAFKPNQQTTLLPE
SVKDIMGSLNGLRKVPGVGHQTAKRLQALGLVGVQDLQLFPLADLVREFGVSTAQHLQNL
ALGIDDTPVTPTGAPQSLSNEDSFKKVSSTNEVWQKVKDLLSSILDRMHKDGRQPLTLRL
TIRRYSATNKWFSRESRQCPIPNHIGQKITSGNCDALAQLVTMAMKLFHKMVDTNTAFHL
TLLNVCFSNLQAKCAAVSKGSIASFFTHRSPEKTQASSRCQEDLSQSVLGNLRGQAGSDV
EGKTEELTGQDASHWIPDIPSNLKIKPYTQSTMHSPEASQQRPMVGECCIGGTVDDKMTN
SPGMTDVHPLPPNIDPEVFRLLPEDIQKELLSAAYPETTHGLHSHGTQSIRPTVSDPADR
THSFHHNHSEQPASSSQPAACKLNDSFHSTPIDLRETVKGFDRQPNALTTNNQQEHTVSS
LHYSLTDLLEEGNSSTGLVSQRQSADCGFPGSVDPKVFSELPPEVQRELLSEWRQQIPVL
KISSSLKKQGKSPLAREKKAPAKSSQANKLSNYFKPSSG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggtggtgaggacattgatgaggatgaaactgactggaacagcatttgctcg
gactttgttcaacccccccatgttgtgatccatgggggcaaatatttcagtaaggtacct
gcaccaccagtacagagagtcatcctacattttgacctggactgtttctatgcccaggtt
gaaatgatccgcaacccagcactgcggaatgtgcctttaggtattcagcaaaagtacatc
atcgtcacctgtaactacgtggccagggaccttggtgtgacaaagctgatgttagtgacg
gatgccaaagagaagtgtcctcagctcgtgctggtcaagggagaggacctgacacactac
agagagacatcttacaaagtcacagagttgctgatgtcgttctgtccattagtagaacgg
ctagggtttgatgagaacttcatggacatcacagagatggtggagaggaggatggaacag
accccggagtctgctcactattcatacgaaggccacatttacaatcttgacacctcggat
gccaaagtcatggtacaccctagactagcggtaggctcacatatcgcagctgaactgaga
gcagagatccacagcaagctgggcctcactggctgtgcgggcattgctaccagtaagctg
ctggccaaactggtggcgggtgccttcaagccaaatcaacaaaccacactgttgccagag
agtgtgaaagacattatgggcagtctaaatggtttacgtaaagtaccaggagtaggccac
cagactgctaagaggcttcaggccctaggattggttggtgtgcaggacctgcagctcttc
ccattggctgacctggtgagggagtttggagtttccactgctcagcatctccagaacctg
gctttgggcattgatgacactccagtcacccccactggtgctccacagtctcttagcaat
gaagactccttcaagaaagtgtcctcaaccaatgaagtttggcagaaggttaaagatttg
ttgagtagcattttagacaggatgcataaagatggcaggcagcctttgacccttcgactg
accatcaggcgttactctgcaaccaacaagtggttcagccgggagagcaggcagtgtccc
atccccaaccacattgggcaaaagataacctctggcaactgtgatgccttggcccagctg
gtcaccatggccatgaagctcttccacaagatggtggacaccaacacagccttccacctc
accctcctcaacgtgtgcttcagtaacctgcaggccaagtgtgctgctgtcagcaaggga
tccatcgcctccttcttcacacacagatctcctgaaaaaacacaggcctcctctcggtgc
caggaggatctgtctcaaagtgtgcttggtaacctccgtggacaggctggatctgatgtt
gaaggtaagacagaggagttgactggtcaggatgcatcacactggataccagacatacct
agcaaccttaagatcaagccttacacacagtcaacaatgcatagccctgaggcctcccag
cagcggcctatggtgggtgagtgctgcataggtggaacagtagatgataaaatgaccaac
agtcctgggatgacagatgttcatccattgccccccaacattgaccctgaggtgttcaga
ctcctgcctgaggacatccagaaggaactgttatcagctgcctacccagagaccacccat
ggcctccacagccatggcactcagtccatcagacccacagtatctgatccagcagacaga
acccactcatttcaccacaaccattcagaacagcctgcctcttcctctcagcctgctgca
tgcaaacttaatgactcatttcacagcactcccatagacctaagagaaactgtgaagggc
tttgacagacagcccaatgcactgacaaccaacaaccaacaagaacacacagtctcctcc
ctgcactattcactcacagacctcttggaggagggaaactcctctacaggcctcgtgtca
cagaggcagtcggctgactgtggtttcccaggaagtgtggaccccaaggtgttctcagaa
ctacctcctgaggttcagagagagctactgtctgagtggagacaacagatacctgtcctt
aaaatttcctcctctttgaaaaaacagggcaaaagccccctggccagagagaagaaggct
ccagctaaaagcagtcaggctaataaattatcgaactatttcaaacccagctcaggttag
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