Oncorhynchus nerka (sockeye salmon): 115111402
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Entry
115111402 CDS
T07952
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00061
Fatty acid biosynthesis
one00071
Fatty acid degradation
one01100
Metabolic pathways
one01212
Fatty acid metabolism
one03320
PPAR signaling pathway
one04920
Adipocytokine signaling pathway
Module
one_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115111402
00071 Fatty acid degradation
115111402
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115111402
03320 PPAR signaling pathway
115111402
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115111402
Enzymes [BR:
one01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115111402
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115111402
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
115111402
NCBI-ProteinID:
XP_029493277
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All DBs
Position
LG27:complement(10594582..10607832)
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AA seq
775 aa
AA seq
DB search
MSDQQDSVLTNGVPDIEKSSESSSVIGIPLGETKPLVPVAKLQQKELYCSPLVNGGVVDH
PQPESESESDGEDTDSQESVAVEPAVITPSRIPEAPAKLPRSPGQEGPQGDPLSDASVPL
KLSDVSLATAEQLWCTSRDQAVKLRMAETGPGSEAPMTIHQMFLKTVKIYGDLPAVASKE
EGQWVTLTWREYYQQCRAAAKSFLKLGLERYHGVGILGFNSPEWFISDIGCILAGGFSAG
IYTTNSPEACQYVADNCEANVLVVENHKQLLKILQIKEQLPHLKAIVQYKDELQQKLPNL
YTWAEFMKLGEEVSDERLDAVVDSQRANQCCTLIYTSGTTGNPKGVMLSHDNITWTSNAV
GAMTSLQHGVECVVSYLPLSHIAAQINDMWICMRFAGATYFADPDALKGSLGTTLKEVRP
TSFLGVPRVWEKMQEKMKAIGAKSSGMKKRVANWAKSIGLQASYSAMNGENLVPWGFMLA
NNLVFKKVRWALGLDRCKNCLTGAAPITKETLEYFMSLSLPLYELYGMSESTGPHTISWE
NNFKIMSCGRVVVGCQTKLDKPDEDGNGELCFWGRHVFMGYLNEPEKTEEALDQEGWLHS
GDLGKQDKDNFLFITGRIKELIITAGGENIPPVPIEDAVKAEIAIISNAMLLGDKMKFLS
MMLTLKCIVDDNGEPTDELTPEAVAFCHQRGITATKASEIIASKEPAIYKAIQEGIEHVN
AKATSNAQRVQKWVILDRDFSISGGELGPTMKLKRGVVVKKFQEKINKIYGMAQE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccaacaggattctgttctcaccaatggggttcctgacatagaaaagagttct
gagagttctagtgtgattggcattcctcttggagaaaccaaaccgttagtaccagttgcc
aaacttcaacagaaggaactctactgcagtcccctcgtcaacggaggggtagtagaccat
ccacaaccagagtcagagtcagagtctgatggagaagacacagacagtcaggagtcagtt
gctgtagaacctgcagtgataaccccatcaagaatacctgaagcaccagccaaattaccc
agatcccctggacaagagggacctcaaggggatcctctctcagatgcctcggtgcccctg
aagctgtcggatgtgtccctggccacagcagagcagctctggtgcacctccagggaccag
gcggttaagctgaggatggctgagacggggccgggatccgaggcccccatgactatccac
cagatgttcttaaagacggtgaagatctatggagacctgcctgcggtggcgtccaaggaa
gaggggcagtgggtaaccctgacctggagggagtactaccagcagtgcagagcggcggcc
aagagcttcctcaagttgggtctggagcgttaccatggcgtcggtattctgggctttaac
tctcctgagtggttcatctcagacatcggctgtatcctggctgggggtttttctgcaggc
atatacaccaccaactcccccgaggcgtgtcagtatgtggcagacaactgtgaggccaac
gtcctggtggtggagaaccacaaacagctcctcaaaatcctccagattaaggaacagctt
ccacacttgaaagctattgttcagtacaaggatgaacttcaacagaagctgccaaacctg
tacacttgggctgagtttatgaagctgggtgaggaggtgtctgatgaacggctagatgct
gtggtggacagtcagagggctaaccagtgttgtacactcatctacacctctggaaccaca
ggcaaccccaaaggggtcatgctaagccatgacaatatcacctggacttcaaatgcggtc
ggagccatgacaagtctgcaacatggtgtggagtgcgtggtgagctacctgcccctgagc
catatagctgcccagatcaacgacatgtggatctgcatgagatttgcaggggcaacgtat
ttcgcagacccagacgccctgaagggctctttggggactactctgaaagaggtgcgcccc
acaagtttcctgggagttccccgtgtgtgggagaagatgcaggagaagatgaaagccatc
ggagccaagtcctctggtatgaagaaaagagtggctaactgggccaaatccatcggattg
caagccagctacagtgccatgaatggtgagaacctggtgccctggggcttcatgctggca
aacaacctggtgtttaagaaagttcgctgggccttgggtctggaccgctgcaagaactgc
ttaacgggggccgcacccatcactaaggagactctggagtacttcatgagccttagcctc
ccgctgtatgaactgtatgggatgagtgaaagcaccggccctcacaccatctcctgggag
aataacttcaagatcatgagctgtggaagggtggtggttggctgccagaccaagttggac
aagccagacgaggatgggaatggtgagctctgtttctgggggcgtcatgtgttcatgggc
tacctgaatgagccagagaagactgaggaggccctggaccaggagggctggctgcactct
ggagacctgggcaagcaggacaaggacaacttcctattcatcacagggaggataaaggag
ctgatcataacagcaggaggagagaacatcccacctgtacccattgaggatgcagtgaaa
gcagagatcgccatcatcagcaacgccatgttgctcggagacaagatgaaattcctctcc
atgatgctcacgctcaaatgtatagttgacgacaatggcgaaccgacggacgagctgacc
ccagaggctgtggcgttctgccatcagcgtggcataacggcaaccaaggcctctgagatc
atagccagtaaggaaccagctatttataaggccatccaggagggcatagagcatgtcaat
gctaaggccacctccaatgcccagagggtccagaagtgggtcattttggacagagatttc
tctatatctgggggagaactgggacctaccatgaagctaaagaggggggttgttgtcaaa
aagttccaggagaaaatcaacaagatttatggaatggcacaagaataa
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