Oncorhynchus nerka (sockeye salmon): 115111442
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Entry
115111442 CDS
T07952
Name
(RefSeq) arrestin domain-containing protein 1-like
KO
K26228
arrestin domain-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115111442
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
115111442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
LDB19
Vps26
Rgp1
Motif
Other DBs
NCBI-GeneID:
115111442
NCBI-ProteinID:
XP_029493345
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Position
LG27:complement(11649284..11660834)
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AA seq
475 aa
AA seq
DB search
MGKLQEFDITFKDNKVVYSPGESLSGTLKITTTEALLCKDIKVNCQGFCGVTSKSNDTAW
MVEEQYFSSTLSVADKGTLKPGDHSFPFKFLIPASVPTSFEGNYGKVMYRVRAFIDTPRF
SKDYKVEKPFYLLSLLNLNDVPDIHGCSSSSVTKKFTYLLGVKTGTVVLKAHSDMKGYTP
GQVIQLTTELHNQSGKTTGTVVACLIQKVTYQTKKPTIDLRTLVQVEGAGVKAGKQVEWK
EQIIVPPLPQSSLADCGLINMEYFIQISLKSPEASFVLPIHIGNISVDTTSARPSRPPPP
TTDPPRSSTNPTKLENSRRSEPSSQDQETPTCPSPHPAPKPVPRIRVSTSSPASPSAPPA
EMDYLVMGAKGQVTEALPTESHSQLGFLSSQATVSPSAFSYAPGLTFSQNQSQSDATNPT
GPLFCVSTGATIPFFSEGSTNPKPTLYPLLPPEYSTSTLPHEAPPSYVESCSSNT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaactccaagaattcgacataacttttaaagacaataaagttgtttatagtcct
ggagagtcactttcaggcactctgaaaatcacaaccaccgaagctctgctatgtaaagat
atcaaagtgaattgccaaggcttctgtggtgtcaccagcaagagcaatgacacagcctgg
atggtggaagagcagtacttcagcagcacgctctctgtggcagataaaggaaccctgaaa
ccgggagatcacagtttcccgttcaagtttctcattccagcctctgttcccacatccttt
gaaggaaactatggaaaagttatgtacagagtgagggctttcattgacactcctcgcttc
tctaaggactataaggtggagaagcctttctacctgctgagtctcctcaacctcaatgat
gtacctgacatccatggatgtagttcatcttccgttactaagaagttcacctacctactg
ggggtaaagacaggaactgtggtgctgaaggcccatagtgacatgaagggctacacgcct
ggtcaggtcatccaactgaccacagagctccacaaccagtctgggaagaccacagggact
gtggtagcctgtctcattcagaaagtaacttaccagacaaagaagcctaccattgacttg
aggactttagtgcaggtggagggtgctggggtgaaggctggcaaacaagttgagtggaag
gagcagattattgtacctcctctgccccagtcatctctggctgactgtggtctaataaac
atggaatactttattcaaatctccttgaaatctcctgaggcttcgtttgtgttgcccatc
cacattggaaacatctcagtggataccacgtcagcacgaccctccagaccccctcctcca
accaccgatcctcctcgctcctccacaaaccctaccaagctagaaaacagcagacgctct
gagccgtcctcccaagaccaagaaactcctacttgcccttccccccacccagccccaaaa
cctgttcccagaatcagagtctccacttcctcccctgcctcccccagtgcccctccagct
gagatggactatctggtcatgggcgccaaggggcaggtgaccgaggccctcccaactgag
agccactcccagcttggtttcttgagctctcaggccactgtctcccccagtgccttcagc
tatgccccaggcctcaccttctcccagaaccagtcccagagtgacgccacaaacccaacg
ggacctttgttctgtgtgtccacaggcgccaccatcccattcttctctgagggcagtacc
aaccccaagcctaccctctacccactcctgcctcctgagtacagcacctcaacactccca
catgaggctcctcccagctatgtcgagagctgtagcagcaacacataa
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