KEGG   Oncorhynchus nerka (sockeye salmon): 115111447
Entry
115111447         CDS       T07952                                 
Name
(RefSeq) negative elongation factor B-like isoform X1
  KO
K15180  negative elongation factor B
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115111447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:one03021]
    115111447
Transcription machinery [BR:one03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     115111447
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 115111447
NCBI-ProteinID: XP_029493351
LinkDB
Position
LG27:complement(11674423..11694135)
AA seq 589 aa
MLDYTIIPAMIIKCVTPPCQCIDYYLTFISLFLVCLGCVVLQTENGILLPTLQSALPFLD
LHGTPRLEFHQSVFDELRDKLMERVATIAEGKDEDRYGKLKELLEKSFPLVKMPSIQPVV
MQVLKHLPKVPEKKLKLVMADKELYTVCAVEVKRQIWQENQALFGDEVSPLLKQYIVAKE
AALFSSDLSILHNFFSPSPKARRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVH
YCTLRAELLMSLHDLDISEICSVDSCHKFTWCLDACIREKFVDAKRARELQGFLDGVKKG
QEEVLGDLSMILCDPFSSNTLVLSTVRNLQELLSQDALPRDSPDLMLLLRMLSLGQGAWD
MIDSQVFKEPRLELEVVTRFLPAMLSVLVDDYTFTVEQKLPSEEKTSLSYPTALPDNFNK
YLQENRVACEMGLYYALHIAKQRNKNALQRLLPALVETYNDMAFGDIFLHLLTAHLTLLS
DEFGTEEFCSAVFDGFLLNSFSSKDNVHRHNLRLLLHLHQKVLPSCVETLVKTLEPSKQS
SDQVKELYTKLTEKLEAQKKSPPQPDEAPSLDLHPVKVPTTASTPTTSL
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgttagattacacaattatccctgcaatgattatcaaatgtgtaacaccaccatgtcag
tgcattgattattatctcaccttcatcagtctgtttttggtctgtctgggctgtgttgtt
ttgcagacagaaaatggcattttgttaccaactcttcagtcagctcttcccttcctggac
cttcacggaactcctcggttggagtttcaccagtctgtctttgacgagcttcgtgacaag
ttgatggagcgagtcgccactattgcggagggcaaggatgaggaccgttatggtaaactt
aaagagctgctggagaagagctttccgctggtgaagatgccttccattcagccagtggtc
atgcaggtgctgaagcatcttccaaaggtaccagagaaaaagctgaagcttgtgatggct
gataaggaactgtatacggtctgtgctgttgaggtgaagaggcagatctggcaggaaaac
caggctctcttcggagatgaggtctcgcccttgctcaagcagtatatcgtggcaaaggag
gcagcacttttcagcagcgatctctctattctgcacaacttcttcagcccctcccccaaa
gcaagacgccaaggagaggtagtcttgaaactgacccagatgattgggaagaatgtgaaa
ctatatgacatggtgctccagtttctgcgaacacttttcctgcgtactcgtaatgtccac
tactgcaccctgcgtgcagagctgctcatgtccctccatgacctggacatcagtgagatc
tgctcagtagactcctgccacaagttcacctggtgcttagatgcctgcatccgtgagaag
tttgtggatgccaagcgagcccgggagttgcaaggttttctggatggagtgaagaaagga
caggaggaagtacttggggacctgtccatgatactgtgtgacccattttccagtaacacc
ctggttttgagtacggtccgaaacctgcaagaattgctaagccaggatgctctacccaga
gacagtccagacctgatgctgttactcagaatgctgtctcttggacaaggtgcttgggat
atgattgacagccaggtctttaaagagcctcgattggaactggaagttgtgacccgtttt
ctcccagccatgttgtcagtacttgtggacgactataccttcactgtagagcagaaactc
cctagtgaggagaagacctccctctcctaccccacagccctgcctgataacttcaacaag
tacctgcaggagaacagggtggcttgtgagatgggtctgtactacgcactccacattgcc
aagcagaggaacaagaatgccttacaaaggttacttcccgcattggtggagacctacaat
gacatggcctttggggacatcttcctgcacctcctgacagcacacctcaccttgctctct
gatgagtttgggactgaagagttctgctctgctgtgtttgatggcttcctcctcaactct
ttctccagtaaagacaatgtccacagacacaacctacgcctgttgcttcaccttcaccag
aaagtgctgccatcttgtgtggagaccttagtgaaaaccctggaaccctcaaaacagagc
agtgaccaggtaaaggagctgtacaccaagctgacagagaaactggaggcccaaaagaag
agtcctccccagccagacgaagccccctccctggacctccatcctgttaaagtgcccact
acagcttccactccaacaacatcactctga

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