Oncorhynchus nerka (sockeye salmon): 115111478
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Entry
115111478 CDS
T07952
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115111478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115111478
03041 Spliceosome [BR:
one03041
]
115111478
03032 DNA replication proteins [BR:
one03032
]
115111478
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
115111478
Spliceosome [BR:
one03041
]
Complex A
U1 snRNP components
Sm proteins
115111478
U2 snRNP components
115111478
Complex B
U1 snRNP components
115111478
U4/U6.U5 tri-snRNP components
115111478
Complex C
U2 snRNP components
115111478
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
115111478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Kringle
Motif
Other DBs
NCBI-GeneID:
115111478
NCBI-ProteinID:
XP_029493419
LinkDB
All DBs
Position
LG27:complement(12617415..12618895)
Genome browser
AA seq
127 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGAGAGRGKAAILKAQVAARGRGRGGMGRG
NIFPKRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtccattggagtgccaatcaaagtccttcatgaagctgagggccacatcgttacctgc
gagaccaacaccggggaggtgtaccgggggaaactcattgaagctgaggacaacatgaac
tgccagatggccaacatcacagtgactcacagagacggccgtgtagcccagctggagcaa
gtgtacatccgaggcagcaagattcgattccttattctgccagacatgctgaagaatgca
ccaatgctaaagagtatgaagaacaagaaccagggagctggagctgggagaggcaaagct
gccattctcaaagcacaagtggctgctaggggtcgaggacgtggagggatgggaagagga
aatatattcccgaaaaggcgataa
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