KEGG   Oncorhynchus nerka (sockeye salmon): 115111522
Entry
115111522         CDS       T07952                                 
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
  KO
K06058  deltex [EC:2.3.2.27]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    115111522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115111522
Enzymes [BR:one01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115111522
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115111522
SSDB
Motif
Pfam: DTC WWE zf-rbx1 WWE_5 zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-RING_Vps41 zf-RING_5 zf-ANAPC11 zf_RING_Vps8 PHD_NSD zf-UDP
Other DBs
NCBI-GeneID: 115111522
NCBI-ProteinID: XP_029493515
LinkDB
Position
LG27:complement(13865227..13924283)
AA seq 650 aa
MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYNVTTCHHIENVLKGDARGTV
VLGQVDAQLAPYVIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCPCQQCILVNSTRAASNAILASQHRKLYGGATGPSGATGTL
TVVRQSNTFAGTTLWSPTSSAGTNNIQHNNISAGGGQAKAEQVQSLLSSANFPCSPALPS
LPPAHGHSHAHAQSHGHHAIINGQNNLNRPGTQRISMGTARGAIPPGVPPLPVKNLTVSG
PVHPAIAGITGILMCAAGLPVCLTRAPKPILHPPLINKSDMKPVPGVNGIRRKTKKKHLR
RGKTPEDVVRRYTEKVKVAPDEDCTICRERLVMSSGYEGVKGIKPEVVGKLGKCGHMYHL
LCLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEYHVIPHCLPGYPEAKTIRIVYD
IPAGLQTTEHPNPGKKFSARGFPRHCYLPDNNKGRRVLKLLIMAWDRRLIFTIATSSTTG
ESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGQDNLKD
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcacggccaggctctggggtgctggtgtcagtcaacgggctggggtacccccctcag
aacctggcccgggtggtggtgtgggagtggctgaatgaacatgggcgctggcggccctac
aacgtgacaacttgccaccacatagagaacgtactgaagggggatgcgcgggggactgtg
gtccttggacaggtggatgcccaacttgccccttacgtcatagacctgcagtccatgcac
cagttcagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtcg
tcggccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcattgacttcaacagcatggtccagacaaac
cggcagagccagaggaaacgccgcctacgccgacgcatggacctagcctaccctctcatc
atgggctccatccccaagtcccagtcttggcccgtgggagccagctccggccagccctgc
ccctgccagcagtgcatcctggtcaacagcacacgggctgcctcaaatgcaatcctggcc
tctcagcaccgtaagctgtatgggggggctaccgggccttcgggggctacaggcacgctc
accgtggtacggcagagtaacaccttcgctggaaccaccctctggtcccccacctctagt
gctgggaccaataatatacaacataacaacataagcgcaggaggaggccaagccaaagct
gaacaggtgcagtctctcctgtctagtgccaactttccatgttccccggcgctgccgtcc
cttccgcctgcacatggccactcccacgcccacgcacaatcccacggacaccatgccatc
atcaatgggcagaacaacctgaaccggccgggcacccagcgcatttccatgggcactgcc
agaggagccatcccaccaggggtccctcccctccctgttaagaaccttactgtctctgga
ccagttcacccagcaattgcaggtattaccggtatcctgatgtgtgcggctggcctgcct
gtgtgtctgaccagggcccctaaacccattctgcacccgccgctcataaacaagagtgac
atgaagcctgtgcctggggtcaacggcatccgccgcaagaccaagaagaagcacctcagg
agagggaaaaccccagaggatgtggtgcggcgatacacagagaaagtgaaagtagcccct
gatgaggactgcaccatctgcagggagaggctggtgatgtcgtcaggctacgagggtgtc
aagggcataaagccagaggtggtgggcaaacttggcaaatgtgggcacatgtaccatctg
ctgtgcctggttgccatgtacaacaatggcaacaaggatggcagtctgcagtgccccact
tgtaaggctatctatggggagaagacaggcacacagccccctgggaagatggagtaccat
gtcatcccccactgcctgcccggctacccagaggccaagaccatccgcatcgtctatgac
attcctgctggcctacagaccacagagcatcccaacccagggaagaagttcagcgctagg
gggttcccccggcactgctacctcccagacaataacaaaggcaggagggtcctgaagctc
ctgatcatggcgtgggaccgccgcctcatcttcaccatcgccacgtccagcaccacggga
gagtcagacacagtggtgtggaatgagatccaccacaagacagagtttggctccaacctg
acggggcacggctacccagaccccaactacctggacaacgttctgacagagctgtcagcc
caaggggtgggacaggacaacctgaaggactga

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