Oncorhynchus nerka (sockeye salmon): 115111522
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Entry
115111522 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115111522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115111522
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115111522
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115111522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-rbx1
WWE_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
PHD_NSD
zf-UDP
Motif
Other DBs
NCBI-GeneID:
115111522
NCBI-ProteinID:
XP_029493515
LinkDB
All DBs
Position
LG27:complement(13865227..13924283)
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AA seq
650 aa
AA seq
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MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYNVTTCHHIENVLKGDARGTV
VLGQVDAQLAPYVIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCPCQQCILVNSTRAASNAILASQHRKLYGGATGPSGATGTL
TVVRQSNTFAGTTLWSPTSSAGTNNIQHNNISAGGGQAKAEQVQSLLSSANFPCSPALPS
LPPAHGHSHAHAQSHGHHAIINGQNNLNRPGTQRISMGTARGAIPPGVPPLPVKNLTVSG
PVHPAIAGITGILMCAAGLPVCLTRAPKPILHPPLINKSDMKPVPGVNGIRRKTKKKHLR
RGKTPEDVVRRYTEKVKVAPDEDCTICRERLVMSSGYEGVKGIKPEVVGKLGKCGHMYHL
LCLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEYHVIPHCLPGYPEAKTIRIVYD
IPAGLQTTEHPNPGKKFSARGFPRHCYLPDNNKGRRVLKLLIMAWDRRLIFTIATSSTTG
ESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGQDNLKD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccaggctctggggtgctggtgtcagtcaacgggctggggtacccccctcag
aacctggcccgggtggtggtgtgggagtggctgaatgaacatgggcgctggcggccctac
aacgtgacaacttgccaccacatagagaacgtactgaagggggatgcgcgggggactgtg
gtccttggacaggtggatgcccaacttgccccttacgtcatagacctgcagtccatgcac
cagttcagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtcg
tcggccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcattgacttcaacagcatggtccagacaaac
cggcagagccagaggaaacgccgcctacgccgacgcatggacctagcctaccctctcatc
atgggctccatccccaagtcccagtcttggcccgtgggagccagctccggccagccctgc
ccctgccagcagtgcatcctggtcaacagcacacgggctgcctcaaatgcaatcctggcc
tctcagcaccgtaagctgtatgggggggctaccgggccttcgggggctacaggcacgctc
accgtggtacggcagagtaacaccttcgctggaaccaccctctggtcccccacctctagt
gctgggaccaataatatacaacataacaacataagcgcaggaggaggccaagccaaagct
gaacaggtgcagtctctcctgtctagtgccaactttccatgttccccggcgctgccgtcc
cttccgcctgcacatggccactcccacgcccacgcacaatcccacggacaccatgccatc
atcaatgggcagaacaacctgaaccggccgggcacccagcgcatttccatgggcactgcc
agaggagccatcccaccaggggtccctcccctccctgttaagaaccttactgtctctgga
ccagttcacccagcaattgcaggtattaccggtatcctgatgtgtgcggctggcctgcct
gtgtgtctgaccagggcccctaaacccattctgcacccgccgctcataaacaagagtgac
atgaagcctgtgcctggggtcaacggcatccgccgcaagaccaagaagaagcacctcagg
agagggaaaaccccagaggatgtggtgcggcgatacacagagaaagtgaaagtagcccct
gatgaggactgcaccatctgcagggagaggctggtgatgtcgtcaggctacgagggtgtc
aagggcataaagccagaggtggtgggcaaacttggcaaatgtgggcacatgtaccatctg
ctgtgcctggttgccatgtacaacaatggcaacaaggatggcagtctgcagtgccccact
tgtaaggctatctatggggagaagacaggcacacagccccctgggaagatggagtaccat
gtcatcccccactgcctgcccggctacccagaggccaagaccatccgcatcgtctatgac
attcctgctggcctacagaccacagagcatcccaacccagggaagaagttcagcgctagg
gggttcccccggcactgctacctcccagacaataacaaaggcaggagggtcctgaagctc
ctgatcatggcgtgggaccgccgcctcatcttcaccatcgccacgtccagcaccacggga
gagtcagacacagtggtgtggaatgagatccaccacaagacagagtttggctccaacctg
acggggcacggctacccagaccccaactacctggacaacgttctgacagagctgtcagcc
caaggggtgggacaggacaacctgaaggactga
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